RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-222ENST00000532785 AEBP2Q6ZN18 517 aaPredicted RBP37.33■■■■□ 3.57
LMO7-222ENST00000532785 CHIC1Q5VXU3 224 aa36.5■■■■□ 3.43
LMO7-222ENST00000532785 PHF23Q9BUL5 403 aaPredicted RBP32.03■■■□□ 2.72
LMO7-222ENST00000532785 SENP3Q9H4L4 574 aaPredicted RBP31.8■■■□□ 2.68
LMO7-222ENST00000532785 PLPPR3Q6T4P5 718 aa29.69■■■□□ 2.34
LMO7-222ENST00000532785 FOXD1Q16676 465 aa29.45■■■□□ 2.31
LMO7-222ENST00000532785 ADRA2BP18089 450 aa28.31■■■□□ 2.12
LMO7-222ENST00000532785 PPP6R1Q9UPN7 881 aa28.27■■■□□ 2.12
LMO7-222ENST00000532785 PIAS4Q8N2W9 510 aaPredicted RBP27.86■■■□□ 2.05
LMO7-222ENST00000532785 MSH5O43196 834 aa27.26■■□□□ 1.95
LMO7-222ENST00000532785 PPP4R3CPQ6ZMV5 832 aa26.13■■□□□ 1.77
LMO7-222ENST00000532785 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
LMO7-222ENST00000532785 MAPK8IP2Q13387 824 aaPredicted RBP25.67■■□□□ 1.7
LMO7-222ENST00000532785 NCBP3Q53F19 620 aaKnown RBP25.52■■□□□ 1.68
LMO7-222ENST00000532785 KCNA4P22459 653 aa25.47■■□□□ 1.67
LMO7-222ENST00000532785 CNKSR2Q8WXI2 1034 aa25.42■■□□□ 1.66
LMO7-222ENST00000532785 DMRT2Q9Y5R5 561 aa25.33■■□□□ 1.65
LMO7-222ENST00000532785 NPM3O75607 178 aaKnown RBP25.04■■□□□ 1.6
LMO7-222ENST00000532785 RNF216Q9NWF9 866 aaPredicted RBP24.91■■□□□ 1.58
LMO7-222ENST00000532785 POTEDQ86YR6 584 aa24.81■■□□□ 1.56
LMO7-222ENST00000532785 HOXD11P31277 338 aaPredicted RBP24.78■■□□□ 1.56
LMO7-222ENST00000532785 DCAF8L1A6NGE4 600 aa24.41■■□□□ 1.5
LMO7-222ENST00000532785 SLC4A1APQ9BWU0 796 aaKnown RBP24.32■■□□□ 1.48
LMO7-222ENST00000532785 DNAJC5BQ9UF47 199 aa24.22■■□□□ 1.47
LMO7-222ENST00000532785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.75■■□□□ 1.393e-10■■□□□ 11.5
LMO7-222ENST00000532785 EHMT2Q96KQ7 1210 aa23.63■■□□□ 1.37
LMO7-222ENST00000532785 SLC4A2P04920 1241 aa23.61■■□□□ 1.37
LMO7-222ENST00000532785 FOXD4L1Q9NU39 408 aa23.5■■□□□ 1.35
LMO7-222ENST00000532785 ZBTB22O15209 634 aa23.38■■□□□ 1.33
LMO7-222ENST00000532785 RNF39Q9H2S5 420 aa23.29■■□□□ 1.32
LMO7-222ENST00000532785 U3KPZ7 1027 aaPredicted RBP23.25■■□□□ 1.31
LMO7-222ENST00000532785 CSRNP3Q8WYN3 585 aa23.24■■□□□ 1.31
LMO7-222ENST00000532785 MYCNP04198 464 aaPredicted RBP23.2■■□□□ 1.3
LMO7-222ENST00000532785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.06■■□□□ 1.28
LMO7-222ENST00000532785 HNRNPUL2Q1KMD3 747 aaKnown RBP23.06■■□□□ 1.28
LMO7-222ENST00000532785 C1QBPQ07021 282 aaKnown RBP23.05■■□□□ 1.28
LMO7-222ENST00000532785 SAMD1Q6SPF0 538 aaPredicted RBP22.95■■□□□ 1.26
LMO7-222ENST00000532785 APLP2Q06481 763 aa22.87■■□□□ 1.25
LMO7-222ENST00000532785 CACNB1Q02641 598 aaPredicted RBP22.8■■□□□ 1.24
LMO7-222ENST00000532785 ATXN8OSP0DMR3 200 aa22.66■■□□□ 1.22
LMO7-222ENST00000532785 CAPN15O75808 1086 aa22.64■■□□□ 1.21
LMO7-222ENST00000532785 SPINK5Q9NQ38 1064 aaPredicted RBP22.63■■□□□ 1.21
LMO7-222ENST00000532785 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
LMO7-222ENST00000532785 ZNF219Q9P2Y4 722 aaPredicted RBP22.5■■□□□ 1.19
LMO7-222ENST00000532785 ATF5Q9Y2D1 282 aaPredicted RBP22.49■■□□□ 1.19
LMO7-222ENST00000532785 ABCB7O75027 752 aa22.17■■□□□ 1.14
LMO7-222ENST00000532785 DSG3P32926 999 aa22.15■■□□□ 1.14
LMO7-222ENST00000532785 POLA2Q14181 598 aa22.09■■□□□ 1.13
LMO7-222ENST00000532785 ZBTB12Q9Y330 459 aaPredicted RBP21.78■■□□□ 1.08
LMO7-222ENST00000532785 FBLN2P98095 1184 aa21.7■■□□□ 1.06
LMO7-222ENST00000532785 MKRN4PQ13434 485 aaPredicted RBP21.5■■□□□ 1.03
LMO7-222ENST00000532785 OSCARQ8IYS5 282 aa21.35■■□□□ 1.01
LMO7-222ENST00000532785 RBM42Q9BTD8 480 aaKnown RBP21.21■□□□□ 0.99
LMO7-222ENST00000532785 SPDYE2BA6NHP3 402 aa21.14■□□□□ 0.97
LMO7-222ENST00000532785 SPDYE6P0CI01 402 aa21.14■□□□□ 0.97
LMO7-222ENST00000532785 SPDYE2Q495Y8 402 aa21.14■□□□□ 0.97
LMO7-222ENST00000532785 SPDYE4A6NLX3 237 aa21.12■□□□□ 0.97
LMO7-222ENST00000532785 FKBP8Q14318 412 aa21.12■□□□□ 0.97
LMO7-222ENST00000532785 ZNF692Q9BU19 519 aaPredicted RBP21.09■□□□□ 0.97
LMO7-222ENST00000532785 SSUH2Q9Y2M2 353 aa20.92■□□□□ 0.94
LMO7-222ENST00000532785 AKT1S1Q96B36 256 aa20.89■□□□□ 0.93
LMO7-222ENST00000532785 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
LMO7-222ENST00000532785 REM2Q8IYK8 340 aaPredicted RBP20.67■□□□□ 0.9
LMO7-222ENST00000532785 PROM2Q8N271 834 aa20.63■□□□□ 0.89
LMO7-222ENST00000532785 SPDYE1Q8NFV5 336 aaPredicted RBP20.55■□□□□ 0.88
LMO7-222ENST00000532785 CLEC11AQ9Y240 323 aa20.51■□□□□ 0.87
LMO7-222ENST00000532785 STAG3Q9UJ98 1225 aa20.47■□□□□ 0.87
LMO7-222ENST00000532785 PITPNM1O00562 1244 aa20.44■□□□□ 0.86
LMO7-222ENST00000532785 FBXO3Q9UK99 471 aa20.41■□□□□ 0.86
LMO7-222ENST00000532785 PRR29P0C7W0 189 aa20.3■□□□□ 0.84
LMO7-222ENST00000532785 CHRDL2Q6WN34 429 aa20.3■□□□□ 0.84
LMO7-222ENST00000532785 VASPP50552 380 aaPredicted RBP20.09■□□□□ 0.81
LMO7-222ENST00000532785 PLCD3Q8N3E9 789 aa20.07■□□□□ 0.8
LMO7-222ENST00000532785 PLEKHG5O94827 1062 aa20.06■□□□□ 0.8
LMO7-222ENST00000532785 MIER1Q8N108 512 aa20.06■□□□□ 0.8
LMO7-222ENST00000532785 FXR2P51116 673 aaKnown RBP eCLIP20.02■□□□□ 0.84e-7■■□□□ 11.7
LMO7-222ENST00000532785 PIP4P2Q8N4L2 257 aa20■□□□□ 0.79
LMO7-222ENST00000532785 PRKAR2AP13861 404 aaKnown RBP19.96■□□□□ 0.79
LMO7-222ENST00000532785 CHADLQ6NUI6 762 aa19.94■□□□□ 0.78
LMO7-222ENST00000532785 CREBZFQ9NS37 354 aa19.94■□□□□ 0.78
LMO7-222ENST00000532785 KLHL34Q8N239 644 aa19.85■□□□□ 0.77
LMO7-222ENST00000532785 ZBTB47Q9UFB7 747 aaPredicted RBP19.85■□□□□ 0.77
LMO7-222ENST00000532785 IFNLR1Q8IU57 520 aaPredicted RBP19.76■□□□□ 0.75
LMO7-222ENST00000532785 FARP1Q9Y4F1 1045 aaPredicted RBP19.75■□□□□ 0.75
LMO7-222ENST00000532785 NPM1P06748 294 aaKnown RBP eCLIP19.72■□□□□ 0.75
LMO7-222ENST00000532785 POTEHQ6S545 545 aa19.68■□□□□ 0.74
LMO7-222ENST00000532785 MNX1P50219 401 aaPredicted RBP19.67■□□□□ 0.74
LMO7-222ENST00000532785 SPOCK2Q92563 424 aa19.6■□□□□ 0.73
LMO7-222ENST00000532785 NUBP1P53384 320 aa19.45■□□□□ 0.7
LMO7-222ENST00000532785 HAX1O00165 279 aa19.44■□□□□ 0.7
LMO7-222ENST00000532785 PAK3O75914 559 aaPredicted RBP19.44■□□□□ 0.7
LMO7-222ENST00000532785 FAM212AQ96EL1 285 aa19.42■□□□□ 0.7
LMO7-222ENST00000532785 CD44P16070 742 aaKnown RBP19.41■□□□□ 0.7
LMO7-222ENST00000532785 RASEFQ8IZ41 740 aa19.41■□□□□ 0.7
LMO7-222ENST00000532785 TSPYL2Q9H2G4 693 aaPredicted RBP19.38■□□□□ 0.69
LMO7-222ENST00000532785 DCAF8Q5TAQ9 597 aa19.37■□□□□ 0.69
LMO7-222ENST00000532785 CIZ1Q9ULV3 898 aaPredicted RBP19.36■□□□□ 0.69
LMO7-222ENST00000532785 C19orf67A6NJJ6 358 aa19.35■□□□□ 0.69
LMO7-222ENST00000532785 GSE1Q14687 1217 aa19.33■□□□□ 0.68
LMO7-222ENST00000532785 ZRANB1Q9UGI0 708 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms