RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 LINC01558Q9Y6Z2 57 aa6.31□□□□□ -1.4
TRAF3IP2-212ENST00000532708 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
TRAF3IP2-212ENST00000532708 COA5Q86WW8 74 aa6.29□□□□□ -1.4
TRAF3IP2-212ENST00000532708 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
TRAF3IP2-212ENST00000532708 WFDC13Q8IUB5 93 aa6.28□□□□□ -1.4
TRAF3IP2-212ENST00000532708 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.4
TRAF3IP2-212ENST00000532708 MRPL34Q9BQ48 92 aaKnown RBP6.23□□□□□ -1.41
TRAF3IP2-212ENST00000532708 TP53AIP1Q9HCN2 124 aa6.22□□□□□ -1.41
TRAF3IP2-212ENST00000532708 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
TRAF3IP2-212ENST00000532708 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
TRAF3IP2-212ENST00000532708 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
TRAF3IP2-212ENST00000532708 SPINK7P58062 85 aa6.12□□□□□ -1.43
TRAF3IP2-212ENST00000532708 Q5W150 140 aa6.11□□□□□ -1.43
TRAF3IP2-212ENST00000532708 HRES1P13985 223 aa6.1□□□□□ -1.43
TRAF3IP2-212ENST00000532708 COX6B2Q6YFQ2 88 aa6.1□□□□□ -1.43
TRAF3IP2-212ENST00000532708 LCE2AQ5TA79 106 aaPredicted RBP6.09□□□□□ -1.43
TRAF3IP2-212ENST00000532708 LINC01554Q52M75 96 aa6.06□□□□□ -1.44
TRAF3IP2-212ENST00000532708 IGKV2D-30A0A075B6S6 120 aa6.04□□□□□ -1.44
TRAF3IP2-212ENST00000532708 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
TRAF3IP2-212ENST00000532708 MT1HP80294 61 aa6.04□□□□□ -1.44
TRAF3IP2-212ENST00000532708 ACYP2P14621 99 aa6.01□□□□□ -1.45
TRAF3IP2-212ENST00000532708 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
TRAF3IP2-212ENST00000532708 FLGP20930 4061 aaPredicted RBP5.99□□□□□ -1.45
TRAF3IP2-212ENST00000532708 PRAC1Q96KF2 57 aa5.97□□□□□ -1.45
TRAF3IP2-212ENST00000532708 M0R2T5 61 aa5.96□□□□□ -1.46
TRAF3IP2-212ENST00000532708 DMAC1Q96GE9 116 aa5.95□□□□□ -1.46
TRAF3IP2-212ENST00000532708 H3BS24 57 aa5.94□□□□□ -1.46
TRAF3IP2-212ENST00000532708 A0A1B0GU69 56 aa5.93□□□□□ -1.46
TRAF3IP2-212ENST00000532708 UQCR11O14957 56 aa5.92□□□□□ -1.46
TRAF3IP2-212ENST00000532708 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.46
TRAF3IP2-212ENST00000532708 ADM2Q7Z4H4 148 aa5.9□□□□□ -1.46
TRAF3IP2-212ENST00000532708 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
TRAF3IP2-212ENST00000532708 LORP23490 312 aaPredicted RBP5.86□□□□□ -1.47
TRAF3IP2-212ENST00000532708 H1FX-AS1Q4G0G2 97 aa5.84□□□□□ -1.47
TRAF3IP2-212ENST00000532708 KRTAP3-1Q9BYR8 98 aa5.82□□□□□ -1.48
TRAF3IP2-212ENST00000532708 CSAG1Q6PB30 78 aa5.81□□□□□ -1.48
TRAF3IP2-212ENST00000532708 KRTAP9-8Q9BYQ0 159 aa5.76□□□□□ -1.49
TRAF3IP2-212ENST00000532708 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.49
TRAF3IP2-212ENST00000532708 S4R3F8 94 aa5.71□□□□□ -1.49
TRAF3IP2-212ENST00000532708 MT2AP02795 61 aa5.7□□□□□ -1.5
TRAF3IP2-212ENST00000532708 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
TRAF3IP2-212ENST00000532708 ROMO1P60602 79 aa5.67□□□□□ -1.5
TRAF3IP2-212ENST00000532708 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
TRAF3IP2-212ENST00000532708 MT1FP04733 61 aa5.66□□□□□ -1.5
TRAF3IP2-212ENST00000532708 KRTAP10-10P60014 251 aa5.65□□□□□ -1.51
TRAF3IP2-212ENST00000532708 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
TRAF3IP2-212ENST00000532708 KRTAP9-3Q9BYQ3 159 aa5.56□□□□□ -1.52
TRAF3IP2-212ENST00000532708 H0YAA0 97 aa5.56□□□□□ -1.52
TRAF3IP2-212ENST00000532708 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
TRAF3IP2-212ENST00000532708 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
TRAF3IP2-212ENST00000532708 A0A1B0GU33 70 aa5.51□□□□□ -1.53
TRAF3IP2-212ENST00000532708 K7ERS5 55 aa5.51□□□□□ -1.53
TRAF3IP2-212ENST00000532708 LCE2BO14633 110 aa5.49□□□□□ -1.53
TRAF3IP2-212ENST00000532708 P0C880 135 aa5.44□□□□□ -1.54
TRAF3IP2-212ENST00000532708 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
TRAF3IP2-212ENST00000532708 USH2AO75445 5202 aa5.43□□□□□ -1.54
TRAF3IP2-212ENST00000532708 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
TRAF3IP2-212ENST00000532708 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.55
TRAF3IP2-212ENST00000532708 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
TRAF3IP2-212ENST00000532708 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
TRAF3IP2-212ENST00000532708 CRIPTQ9P021 101 aa5.33□□□□□ -1.56
TRAF3IP2-212ENST00000532708 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
TRAF3IP2-212ENST00000532708 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
TRAF3IP2-212ENST00000532708 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
TRAF3IP2-212ENST00000532708 MT1BP07438 61 aa5.26□□□□□ -1.57
TRAF3IP2-212ENST00000532708 R4GN34 69 aa5.25□□□□□ -1.57
TRAF3IP2-212ENST00000532708 M0QZ58 72 aa5.23□□□□□ -1.57
TRAF3IP2-212ENST00000532708 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
TRAF3IP2-212ENST00000532708 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
TRAF3IP2-212ENST00000532708 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
TRAF3IP2-212ENST00000532708 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
TRAF3IP2-212ENST00000532708 PLAC4Q8WY50 150 aa5.09□□□□□ -1.59
TRAF3IP2-212ENST00000532708 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
TRAF3IP2-212ENST00000532708 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
TRAF3IP2-212ENST00000532708 A0A0D9SG42 100 aa5.05□□□□□ -1.6
TRAF3IP2-212ENST00000532708 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
TRAF3IP2-212ENST00000532708 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
TRAF3IP2-212ENST00000532708 MT1XP80297 61 aa5□□□□□ -1.61
TRAF3IP2-212ENST00000532708 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
TRAF3IP2-212ENST00000532708 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
TRAF3IP2-212ENST00000532708 PRO2289Q9P1D8 64 aa4.96□□□□□ -1.61
TRAF3IP2-212ENST00000532708 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
TRAF3IP2-212ENST00000532708 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
TRAF3IP2-212ENST00000532708 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
TRAF3IP2-212ENST00000532708 KMT2DO14686 5537 aa4.88□□□□□ -1.63
TRAF3IP2-212ENST00000532708 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
TRAF3IP2-212ENST00000532708 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
TRAF3IP2-212ENST00000532708 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
TRAF3IP2-212ENST00000532708 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
TRAF3IP2-212ENST00000532708 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
TRAF3IP2-212ENST00000532708 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
TRAF3IP2-212ENST00000532708 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
TRAF3IP2-212ENST00000532708 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
TRAF3IP2-212ENST00000532708 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
TRAF3IP2-212ENST00000532708 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
TRAF3IP2-212ENST00000532708 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
TRAF3IP2-212ENST00000532708 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
TRAF3IP2-212ENST00000532708 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
TRAF3IP2-212ENST00000532708 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
TRAF3IP2-212ENST00000532708 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms