RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 KIAA1109Q2LD37 5005 aa12.24□□□□□ -0.45
SORL1-210ENST00000532451 MYCBP2O75592 4640 aa12.16□□□□□ -0.46
SORL1-210ENST00000532451 EPPK1P58107 5090 aaKnown RBP12.12□□□□□ -0.47
SORL1-210ENST00000532451 A0A1B0GU33 70 aa12.12□□□□□ -0.47
SORL1-210ENST00000532451 H0YAA0 97 aa12.11□□□□□ -0.47
SORL1-210ENST00000532451 H1FX-AS1Q4G0G2 97 aa12.09□□□□□ -0.47
SORL1-210ENST00000532451 KRTAP3-3Q9BYR6 98 aa12.03□□□□□ -0.48
SORL1-210ENST00000532451 TPRXLQ17RH7 258 aa11.98□□□□□ -0.49
SORL1-210ENST00000532451 RBM12B-AS1Q9P1G2 102 aa11.98□□□□□ -0.49
SORL1-210ENST00000532451 S4R3F8 94 aa11.97□□□□□ -0.49
SORL1-210ENST00000532451 ADM2Q7Z4H4 148 aa11.91□□□□□ -0.5
SORL1-210ENST00000532451 PRAC1Q96KF2 57 aa11.9□□□□□ -0.5
SORL1-210ENST00000532451 KRTAP4-5Q9BYR2 181 aa11.86□□□□□ -0.51
SORL1-210ENST00000532451 KRTAP10-6P60371 365 aaPredicted RBP11.85□□□□□ -0.51
SORL1-210ENST00000532451 LRP2P98164 4655 aa11.8□□□□□ -0.52
SORL1-210ENST00000532451 KRTAP3-2Q9BYR7 98 aa11.79□□□□□ -0.52
SORL1-210ENST00000532451 LPAP08519 4548 aa11.78□□□□□ -0.52
SORL1-210ENST00000532451 ABCA13Q86UQ4 5058 aa11.7□□□□□ -0.54
SORL1-210ENST00000532451 KRTAP13-4Q3LI77 160 aa11.67□□□□□ -0.54
SORL1-210ENST00000532451 K7ERS5 55 aa11.67□□□□□ -0.54
SORL1-210ENST00000532451 BIRC6Q9NR09 4857 aa11.64□□□□□ -0.55
SORL1-210ENST00000532451 P0C880 135 aa11.64□□□□□ -0.55
SORL1-210ENST00000532451 CSAG1Q6PB30 78 aa11.6□□□□□ -0.55
SORL1-210ENST00000532451 A0A0D9SG42 100 aa11.54□□□□□ -0.56
SORL1-210ENST00000532451 SEC61BP60468 96 aaKnown RBP11.53□□□□□ -0.56
SORL1-210ENST00000532451 J3QL48 77 aa11.52□□□□□ -0.57
SORL1-210ENST00000532451 HERC2O95714 4834 aa11.45□□□□□ -0.58
SORL1-210ENST00000532451 LINC01554Q52M75 96 aa11.43□□□□□ -0.58
SORL1-210ENST00000532451 MUC17Q685J3 4493 aa11.39□□□□□ -0.59
SORL1-210ENST00000532451 ROMO1P60602 79 aa11.35□□□□□ -0.59
SORL1-210ENST00000532451 KRTAP25-1Q3LHN0 102 aa11.35□□□□□ -0.59
SORL1-210ENST00000532451 KRTAP4-1Q9BYQ7 146 aa11.34□□□□□ -0.59
SORL1-210ENST00000532451 M0QZ58 72 aa11.31□□□□□ -0.6
SORL1-210ENST00000532451 KRTAP12-2P59991 146 aa11.27□□□□□ -0.6
SORL1-210ENST00000532451 KRTAP12-1P59990 96 aa11.23□□□□□ -0.61
SORL1-210ENST00000532451 CRIPTQ9P021 101 aa11.21□□□□□ -0.62
SORL1-210ENST00000532451 PCLOQ9Y6V0 5065 aa11.19□□□□□ -0.62
SORL1-210ENST00000532451 SPINT4Q6UDR6 99 aa11.18□□□□□ -0.62
SORL1-210ENST00000532451 KRTAP19-2Q3LHN2 52 aa11.14□□□□□ -0.63
SORL1-210ENST00000532451 R4GN34 69 aa11.07□□□□□ -0.64
SORL1-210ENST00000532451 LORP23490 312 aaPredicted RBP10.97□□□□□ -0.65
SORL1-210ENST00000532451 C10orf95Q9H7T3 257 aa10.89□□□□□ -0.67
SORL1-210ENST00000532451 HERC1Q15751 4861 aa10.85□□□□□ -0.67
SORL1-210ENST00000532451 FLGP20930 4061 aaPredicted RBP10.82□□□□□ -0.68
SORL1-210ENST00000532451 MUC2Q02817 5179 aa10.8□□□□□ -0.68
SORL1-210ENST00000532451 HMCN2Q8NDA2 5059 aa10.79□□□□□ -0.68
SORL1-210ENST00000532451 LCE2CQ5TA81 110 aa10.56□□□□□ -0.72
SORL1-210ENST00000532451 CAMK2N1Q7Z7J9 78 aa10.48□□□□□ -0.73
SORL1-210ENST00000532451 FAT4Q6V0I7 4981 aa10.32□□□□□ -0.76
SORL1-210ENST00000532451 MT1HP80294 61 aa10.29□□□□□ -0.76
SORL1-210ENST00000532451 RNF213Q63HN8 5207 aa10.29□□□□□ -0.76
SORL1-210ENST00000532451 M0R2T5 61 aa10.28□□□□□ -0.76
SORL1-210ENST00000532451 KRTAP15-1Q3LI76 137 aa10.28□□□□□ -0.76
SORL1-210ENST00000532451 UBR4Q5T4S7 5183 aa10.25□□□□□ -0.77
SORL1-210ENST00000532451 SPRR2GQ9BYE4 73 aa10.22□□□□□ -0.77
SORL1-210ENST00000532451 PP632Q6XCG6 107 aa10.17□□□□□ -0.78
SORL1-210ENST00000532451 KRTAP19-1Q8IUB9 90 aa10.16□□□□□ -0.78
SORL1-210ENST00000532451 MT2AP02795 61 aa10.08□□□□□ -0.8
SORL1-210ENST00000532451 TNP1P09430 55 aa10.07□□□□□ -0.8
SORL1-210ENST00000532451 PLAC4Q8WY50 150 aa10.07□□□□□ -0.8
SORL1-210ENST00000532451 MT1FP04733 61 aa10.05□□□□□ -0.8
SORL1-210ENST00000532451 KRTAP10-10P60014 251 aa10.03□□□□□ -0.8
SORL1-210ENST00000532451 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.8
SORL1-210ENST00000532451 H3BS24 57 aa9.98□□□□□ -0.81
SORL1-210ENST00000532451 KRTAP23-1A1A580 65 aa9.93□□□□□ -0.82
SORL1-210ENST00000532451 NDUFAF8A1L188 74 aa9.87□□□□□ -0.83
SORL1-210ENST00000532451 KRTAP19-8Q3LI54 63 aa9.82□□□□□ -0.84
SORL1-210ENST00000532451 MT1BP07438 61 aa9.68□□□□□ -0.86
SORL1-210ENST00000532451 KRTAP9-3Q9BYQ3 159 aa9.62□□□□□ -0.87
SORL1-210ENST00000532451 KRTAP10-5P60370 271 aa9.56□□□□□ -0.88
SORL1-210ENST00000532451 LCE3AQ5TA76 89 aa9.56□□□□□ -0.88
SORL1-210ENST00000532451 MT1XP80297 61 aa9.55□□□□□ -0.88
SORL1-210ENST00000532451 LUZP6Q538Z0 58 aa9.44□□□□□ -0.9
SORL1-210ENST00000532451 SPRR5A0A1B0GTR4 108 aa9.38□□□□□ -0.91
SORL1-210ENST00000532451 KRTAP8-1Q8IUC2 63 aa9.35□□□□□ -0.91
SORL1-210ENST00000532451 LCE2AQ5TA79 106 aaPredicted RBP9.3□□□□□ -0.92
SORL1-210ENST00000532451 KRTAP10-12P60413 245 aa9.29□□□□□ -0.92
SORL1-210ENST00000532451 PRO2289Q9P1D8 64 aa9.27□□□□□ -0.93
SORL1-210ENST00000532451 LCE2BO14633 110 aa9.25□□□□□ -0.93
SORL1-210ENST00000532451 KRTAP10-7P60409 375 aaPredicted RBP9.24□□□□□ -0.93
SORL1-210ENST00000532451 KRTAP12-3P60328 96 aa9.12□□□□□ -0.95
SORL1-210ENST00000532451 USH2AO75445 5202 aa8.89□□□□□ -0.99
SORL1-210ENST00000532451 KRTAP19-5Q3LI72 72 aa8.82□□□□□ -1
SORL1-210ENST00000532451 A0A0A0MQY5 61 aa8.76□□□□□ -1.01
SORL1-210ENST00000532451 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
SORL1-210ENST00000532451 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.02
SORL1-210ENST00000532451 KMT2DO14686 5537 aa8.65□□□□□ -1.02
SORL1-210ENST00000532451 LCE3CQ5T5A8 94 aa8.58□□□□□ -1.04
SORL1-210ENST00000532451 SSPOA2VEC9 5147 aa8.52□□□□□ -1.05
SORL1-210ENST00000532451 KRTAP19-7Q3SYF9 63 aa8.51□□□□□ -1.05
SORL1-210ENST00000532451 FSIP2Q5CZC0 6907 aa8.51□□□□□ -1.05
SORL1-210ENST00000532451 KRTAP19-6Q3LI70 58 aa8.43□□□□□ -1.06
SORL1-210ENST00000532451 LCE2DQ5TA82 110 aaPredicted RBP8.37□□□□□ -1.07
SORL1-210ENST00000532451 MT1EP04732 61 aa8.3□□□□□ -1.08
SORL1-210ENST00000532451 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
SORL1-210ENST00000532451 KRTAP19-4Q3LI73 84 aa8.27□□□□□ -1.09
SORL1-210ENST00000532451 MT1LQ93083 61 aa8.25□□□□□ -1.09
SORL1-210ENST00000532451 KRTAP9-6A8MVA2 160 aa8.22□□□□□ -1.09
SORL1-210ENST00000532451 KRTAP4-7Q9BYR0 210 aa8.2□□□□□ -1.1
SORL1-210ENST00000532451 INE1O15225 51 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms