RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 MP68P56378 58 aa6.42□□□□□ -1.38
TSPAN4-220ENST00000532375 H3BPC8 53 aa6.38□□□□□ -1.39
TSPAN4-220ENST00000532375 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
TSPAN4-220ENST00000532375 SCGB1A1P11684 91 aa6.37□□□□□ -1.39
TSPAN4-220ENST00000532375 A8MUN3 132 aa6.35□□□□□ -1.39
TSPAN4-220ENST00000532375 FCGBPQ9Y6R7 5405 aaPredicted RBP6.35□□□□□ -1.39
TSPAN4-220ENST00000532375 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
TSPAN4-220ENST00000532375 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
TSPAN4-220ENST00000532375 FAM236AA0A1B0GUQ0 79 aa6.31□□□□□ -1.4
TSPAN4-220ENST00000532375 FAM236BA0A1B0GV22 79 aa6.31□□□□□ -1.4
TSPAN4-220ENST00000532375 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
TSPAN4-220ENST00000532375 TRAV7A0A075B6U4 112 aa6.29□□□□□ -1.4
TSPAN4-220ENST00000532375 NDUFC1O43677 76 aa6.28□□□□□ -1.4
TSPAN4-220ENST00000532375 SMIM20Q8N5G0 67 aa6.27□□□□□ -1.41
TSPAN4-220ENST00000532375 DMAC1Q96GE9 116 aa6.26□□□□□ -1.41
TSPAN4-220ENST00000532375 H0YAA0 97 aa6.25□□□□□ -1.41
TSPAN4-220ENST00000532375 MT1BP07438 61 aa6.24□□□□□ -1.41
TSPAN4-220ENST00000532375 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
TSPAN4-220ENST00000532375 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
TSPAN4-220ENST00000532375 CRIPTQ9P021 101 aa6.18□□□□□ -1.42
TSPAN4-220ENST00000532375 ADM2Q7Z4H4 148 aa6.15□□□□□ -1.42
TSPAN4-220ENST00000532375 SNURFQ9Y675 71 aa6.15□□□□□ -1.42
TSPAN4-220ENST00000532375 Q5VV11 94 aa6.14□□□□□ -1.43
TSPAN4-220ENST00000532375 SERP2Q8N6R1 65 aa6.13□□□□□ -1.43
TSPAN4-220ENST00000532375 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
TSPAN4-220ENST00000532375 ACYP2P14621 99 aa6.1□□□□□ -1.43
TSPAN4-220ENST00000532375 P0C880 135 aa6.09□□□□□ -1.43
TSPAN4-220ENST00000532375 C20orf197Q8N268 126 aa6.09□□□□□ -1.43
TSPAN4-220ENST00000532375 SPANXA2-OT1Q8N9U9 137 aa6.06□□□□□ -1.44
TSPAN4-220ENST00000532375 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
TSPAN4-220ENST00000532375 A6NN06 94 aa6.01□□□□□ -1.45
TSPAN4-220ENST00000532375 NEBP20929 6669 aa6.01□□□□□ -1.45
TSPAN4-220ENST00000532375 COX7CP15954 63 aa5.99□□□□□ -1.45
TSPAN4-220ENST00000532375 CYSTM1Q9H1C7 97 aa5.95□□□□□ -1.46
TSPAN4-220ENST00000532375 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
TSPAN4-220ENST00000532375 SPTSSBQ8NFR3 76 aa5.94□□□□□ -1.46
TSPAN4-220ENST00000532375 R4GN34 69 aa5.94□□□□□ -1.46
TSPAN4-220ENST00000532375 CHKB-CPT1BH3BT56 60 aa5.92□□□□□ -1.46
TSPAN4-220ENST00000532375 M0QZ58 72 aa5.92□□□□□ -1.46
TSPAN4-220ENST00000532375 H7BZZ5 65 aa5.9□□□□□ -1.46
TSPAN4-220ENST00000532375 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.46
TSPAN4-220ENST00000532375 MT1XP80297 61 aa5.88□□□□□ -1.47
TSPAN4-220ENST00000532375 COA5Q86WW8 74 aa5.86□□□□□ -1.47
TSPAN4-220ENST00000532375 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
TSPAN4-220ENST00000532375 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
TSPAN4-220ENST00000532375 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
TSPAN4-220ENST00000532375 ANAPC13Q9BS18 74 aa5.81□□□□□ -1.48
TSPAN4-220ENST00000532375 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
TSPAN4-220ENST00000532375 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
TSPAN4-220ENST00000532375 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
TSPAN4-220ENST00000532375 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
TSPAN4-220ENST00000532375 KMT2DO14686 5537 aa5.7□□□□□ -1.5
TSPAN4-220ENST00000532375 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
TSPAN4-220ENST00000532375 SERP1Q9Y6X1 66 aa5.62□□□□□ -1.51
TSPAN4-220ENST00000532375 SEC61GP60059 68 aa5.61□□□□□ -1.51
TSPAN4-220ENST00000532375 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
TSPAN4-220ENST00000532375 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
TSPAN4-220ENST00000532375 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
TSPAN4-220ENST00000532375 A0A1B0GU33 70 aa5.58□□□□□ -1.52
TSPAN4-220ENST00000532375 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
TSPAN4-220ENST00000532375 SPATA8Q6RVD6 105 aa5.58□□□□□ -1.52
TSPAN4-220ENST00000532375 GPR98Q8WXG9 6306 aa5.57□□□□□ -1.52
TSPAN4-220ENST00000532375 ATP5EP56381 51 aaPredicted RBP5.57□□□□□ -1.52
TSPAN4-220ENST00000532375 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
TSPAN4-220ENST00000532375 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
TSPAN4-220ENST00000532375 A0A1B0GU69 56 aa5.52□□□□□ -1.53
TSPAN4-220ENST00000532375 A0A0D9SG42 100 aa5.51□□□□□ -1.53
TSPAN4-220ENST00000532375 TMEM258P61165 79 aa5.5□□□□□ -1.53
TSPAN4-220ENST00000532375 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
TSPAN4-220ENST00000532375 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
TSPAN4-220ENST00000532375 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
TSPAN4-220ENST00000532375 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
TSPAN4-220ENST00000532375 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
TSPAN4-220ENST00000532375 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
TSPAN4-220ENST00000532375 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
TSPAN4-220ENST00000532375 A8MU10 97 aa5.41□□□□□ -1.54
TSPAN4-220ENST00000532375 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
TSPAN4-220ENST00000532375 SMIM26A0A096LP01 95 aa5.39□□□□□ -1.55
TSPAN4-220ENST00000532375 SPRR2EP22531 72 aa5.37□□□□□ -1.55
TSPAN4-220ENST00000532375 SPRR2BP35325 72 aa5.37□□□□□ -1.55
TSPAN4-220ENST00000532375 SPRR2AP35326 72 aa5.37□□□□□ -1.55
TSPAN4-220ENST00000532375 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
TSPAN4-220ENST00000532375 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
TSPAN4-220ENST00000532375 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
TSPAN4-220ENST00000532375 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
TSPAN4-220ENST00000532375 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
TSPAN4-220ENST00000532375 UQCR11O14957 56 aa5.23□□□□□ -1.57
TSPAN4-220ENST00000532375 MT1EP04732 61 aa5.19□□□□□ -1.58
TSPAN4-220ENST00000532375 SPRR2DP22532 72 aa5.19□□□□□ -1.58
TSPAN4-220ENST00000532375 Q1T7F1 81 aa5.18□□□□□ -1.58
TSPAN4-220ENST00000532375 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
TSPAN4-220ENST00000532375 V9GYY9 64 aa5.14□□□□□ -1.59
TSPAN4-220ENST00000532375 PSPHP1O15172 72 aa5.13□□□□□ -1.59
TSPAN4-220ENST00000532375 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
TSPAN4-220ENST00000532375 TNP1P09430 55 aa5.11□□□□□ -1.59
TSPAN4-220ENST00000532375 PCP4P48539 62 aa5.11□□□□□ -1.59
TSPAN4-220ENST00000532375 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
TSPAN4-220ENST00000532375 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
TSPAN4-220ENST00000532375 KRTAP19-3Q7Z4W3 81 aa5.09□□□□□ -1.59
TSPAN4-220ENST00000532375 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms