RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 IMUPQ9GZP8 106 aa5□□□□□ -1.61
GPATCH4-216ENST00000531900 MP68P56378 58 aa4.99□□□□□ -1.61
GPATCH4-216ENST00000531900 KRTAP19-6Q3LI70 58 aa4.99□□□□□ -1.61
GPATCH4-216ENST00000531900 A8MUN3 132 aa4.98□□□□□ -1.61
GPATCH4-216ENST00000531900 H3BPC8 53 aa4.98□□□□□ -1.61
GPATCH4-216ENST00000531900 LINC00208Q96KT6 92 aa4.98□□□□□ -1.61
GPATCH4-216ENST00000531900 K7ERU9 68 aa4.97□□□□□ -1.61
GPATCH4-216ENST00000531900 KLKP1Q107X0 134 aa4.95□□□□□ -1.62
GPATCH4-216ENST00000531900 SCGB1A1P11684 91 aa4.93□□□□□ -1.62
GPATCH4-216ENST00000531900 MT-ATP8P03928 68 aa4.91□□□□□ -1.62
GPATCH4-216ENST00000531900 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
GPATCH4-216ENST00000531900 FAM236AA0A1B0GUQ0 79 aa4.9□□□□□ -1.63
GPATCH4-216ENST00000531900 FAM236BA0A1B0GV22 79 aa4.9□□□□□ -1.63
GPATCH4-216ENST00000531900 H0YAA0 97 aa4.9□□□□□ -1.63
GPATCH4-216ENST00000531900 MACF1Q9UPN3 7388 aaKnown RBP4.9□□□□□ -1.63
GPATCH4-216ENST00000531900 NDUFC1O43677 76 aa4.89□□□□□ -1.63
GPATCH4-216ENST00000531900 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
GPATCH4-216ENST00000531900 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
GPATCH4-216ENST00000531900 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
GPATCH4-216ENST00000531900 TRAV7A0A075B6U4 112 aa4.85□□□□□ -1.63
GPATCH4-216ENST00000531900 DMAC1Q96GE9 116 aa4.85□□□□□ -1.63
GPATCH4-216ENST00000531900 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
GPATCH4-216ENST00000531900 MT1BP07438 61 aa4.82□□□□□ -1.64
GPATCH4-216ENST00000531900 KRTAP6-3Q3LI67 103 aa4.81□□□□□ -1.64
GPATCH4-216ENST00000531900 Q5VV11 94 aa4.79□□□□□ -1.64
GPATCH4-216ENST00000531900 A6NN06 94 aa4.77□□□□□ -1.65
GPATCH4-216ENST00000531900 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
GPATCH4-216ENST00000531900 ACYP2P14621 99 aa4.74□□□□□ -1.65
GPATCH4-216ENST00000531900 SERP2Q8N6R1 65 aa4.73□□□□□ -1.65
GPATCH4-216ENST00000531900 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
GPATCH4-216ENST00000531900 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
GPATCH4-216ENST00000531900 SPANXA2-OT1Q8N9U9 137 aa4.7□□□□□ -1.66
GPATCH4-216ENST00000531900 SNURFQ9Y675 71 aa4.69□□□□□ -1.66
GPATCH4-216ENST00000531900 P0C880 135 aa4.67□□□□□ -1.66
GPATCH4-216ENST00000531900 SPTSSBQ8NFR3 76 aa4.65□□□□□ -1.67
GPATCH4-216ENST00000531900 R4GN34 69 aa4.64□□□□□ -1.67
GPATCH4-216ENST00000531900 COX7CP15954 63 aa4.6□□□□□ -1.67
GPATCH4-216ENST00000531900 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
GPATCH4-216ENST00000531900 M0QZ58 72 aa4.59□□□□□ -1.67
GPATCH4-216ENST00000531900 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
GPATCH4-216ENST00000531900 MT1XP80297 61 aa4.55□□□□□ -1.68
GPATCH4-216ENST00000531900 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
GPATCH4-216ENST00000531900 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
GPATCH4-216ENST00000531900 PRO2289Q9P1D8 64 aa4.54□□□□□ -1.68
GPATCH4-216ENST00000531900 NEBP20929 6669 aa4.54□□□□□ -1.68
GPATCH4-216ENST00000531900 H7BZZ5 65 aa4.52□□□□□ -1.69
GPATCH4-216ENST00000531900 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
GPATCH4-216ENST00000531900 COA5Q86WW8 74 aa4.5□□□□□ -1.69
GPATCH4-216ENST00000531900 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
GPATCH4-216ENST00000531900 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
GPATCH4-216ENST00000531900 KMT2DO14686 5537 aa4.49□□□□□ -1.69
GPATCH4-216ENST00000531900 LINC01554Q52M75 96 aa4.47□□□□□ -1.69
GPATCH4-216ENST00000531900 KRTAP12-2P59991 146 aa4.46□□□□□ -1.7
GPATCH4-216ENST00000531900 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
GPATCH4-216ENST00000531900 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
GPATCH4-216ENST00000531900 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
GPATCH4-216ENST00000531900 SPRR2FQ96RM1 72 aa4.4□□□□□ -1.71
GPATCH4-216ENST00000531900 PCP4P48539 62 aa4.38□□□□□ -1.71
GPATCH4-216ENST00000531900 SEC61GP60059 68 aa4.38□□□□□ -1.71
GPATCH4-216ENST00000531900 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
GPATCH4-216ENST00000531900 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
GPATCH4-216ENST00000531900 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
GPATCH4-216ENST00000531900 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
GPATCH4-216ENST00000531900 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
GPATCH4-216ENST00000531900 SPRR2EP22531 72 aa4.36□□□□□ -1.71
GPATCH4-216ENST00000531900 SPRR2BP35325 72 aa4.36□□□□□ -1.71
GPATCH4-216ENST00000531900 SPRR2AP35326 72 aa4.36□□□□□ -1.71
GPATCH4-216ENST00000531900 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
GPATCH4-216ENST00000531900 ATP5EP56381 51 aaPredicted RBP4.33□□□□□ -1.72
GPATCH4-216ENST00000531900 A0A1B0GU33 70 aa4.32□□□□□ -1.72
GPATCH4-216ENST00000531900 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
GPATCH4-216ENST00000531900 KRTAP4-8A0A0G2JLE6 195 aa4.29□□□□□ -1.72
GPATCH4-216ENST00000531900 KRTAP4-8Q9BYQ9 185 aa4.29□□□□□ -1.72
GPATCH4-216ENST00000531900 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
GPATCH4-216ENST00000531900 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
GPATCH4-216ENST00000531900 A0A1B0GU69 56 aa4.26□□□□□ -1.73
GPATCH4-216ENST00000531900 TMEM258P61165 79 aa4.26□□□□□ -1.73
GPATCH4-216ENST00000531900 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
GPATCH4-216ENST00000531900 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
GPATCH4-216ENST00000531900 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
GPATCH4-216ENST00000531900 A0A0D9SG42 100 aa4.22□□□□□ -1.73
GPATCH4-216ENST00000531900 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
GPATCH4-216ENST00000531900 A0A0A0MQY5 61 aa4.21□□□□□ -1.74
GPATCH4-216ENST00000531900 SPRR2DP22532 72 aa4.21□□□□□ -1.74
GPATCH4-216ENST00000531900 SMIM26A0A096LP01 95 aa4.2□□□□□ -1.74
GPATCH4-216ENST00000531900 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
GPATCH4-216ENST00000531900 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
GPATCH4-216ENST00000531900 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
GPATCH4-216ENST00000531900 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
GPATCH4-216ENST00000531900 A8MU10 97 aa4.12□□□□□ -1.75
GPATCH4-216ENST00000531900 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
GPATCH4-216ENST00000531900 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
GPATCH4-216ENST00000531900 UQCR11O14957 56 aa4.06□□□□□ -1.76
GPATCH4-216ENST00000531900 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
GPATCH4-216ENST00000531900 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
GPATCH4-216ENST00000531900 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
GPATCH4-216ENST00000531900 MT1EP04732 61 aa4.02□□□□□ -1.77
GPATCH4-216ENST00000531900 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
GPATCH4-216ENST00000531900 V9GYY9 64 aa4.01□□□□□ -1.77
GPATCH4-216ENST00000531900 TNP1P09430 55 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms