RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
CAPRIN1-209ENST00000530820 PLECQ15149 4684 aaKnown RBP4.28□□□□□ -1.72
CAPRIN1-209ENST00000530820 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
CAPRIN1-209ENST00000530820 LRP1BQ9NZR2 4599 aa4.26□□□□□ -1.73
CAPRIN1-209ENST00000530820 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
CAPRIN1-209ENST00000530820 PRKDCP78527 4128 aaKnown RBP4.24□□□□□ -1.73
CAPRIN1-209ENST00000530820 DNAH3Q8TD57 4116 aa4.23□□□□□ -1.73
CAPRIN1-209ENST00000530820 APOBP04114 4563 aaKnown RBP4.23□□□□□ -1.73
CAPRIN1-209ENST00000530820 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
CAPRIN1-209ENST00000530820 KRTAP10-1P60331 282 aa4.17□□□□□ -1.74
CAPRIN1-209ENST00000530820 HSPG2P98160 4391 aa4.16□□□□□ -1.74
CAPRIN1-209ENST00000530820 VPS13BQ7Z7G8 4022 aa4.14□□□□□ -1.75
CAPRIN1-209ENST00000530820 LRP1Q07954 4544 aaKnown RBP4.13□□□□□ -1.75
CAPRIN1-209ENST00000530820 FAT2Q9NYQ8 4349 aa4.11□□□□□ -1.75
CAPRIN1-209ENST00000530820 FAT1Q14517 4588 aa4.1□□□□□ -1.75
CAPRIN1-209ENST00000530820 LORP23490 312 aaPredicted RBP4.1□□□□□ -1.75
CAPRIN1-209ENST00000530820 STARD9Q9P2P6 4700 aa4.09□□□□□ -1.75
CAPRIN1-209ENST00000530820 FAT3Q8TDW7 4589 aa4.08□□□□□ -1.76
CAPRIN1-209ENST00000530820 LPAP08519 4548 aa4.05□□□□□ -1.76
CAPRIN1-209ENST00000530820 PKHD1P08F94 4074 aa3.99□□□□□ -1.77
CAPRIN1-209ENST00000530820 DNAH5Q8TE73 4624 aa3.98□□□□□ -1.77
CAPRIN1-209ENST00000530820 HYDINQ4G0P3 5121 aa3.97□□□□□ -1.77
CAPRIN1-209ENST00000530820 KRTAP21-3Q3LHN1 58 aa3.97□□□□□ -1.77
CAPRIN1-209ENST00000530820 KMT2CQ8NEZ4 4911 aaKnown RBP3.94□□□□□ -1.78
CAPRIN1-209ENST00000530820 DYNC1H1Q14204 4646 aaKnown RBP3.92□□□□□ -1.78
CAPRIN1-209ENST00000530820 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
CAPRIN1-209ENST00000530820 LRP2P98164 4655 aa3.9□□□□□ -1.79
CAPRIN1-209ENST00000530820 DYNC2H1Q8NCM8 4307 aaKnown RBP3.9□□□□□ -1.79
CAPRIN1-209ENST00000530820 TNP1P09430 55 aa3.89□□□□□ -1.79
CAPRIN1-209ENST00000530820 INE1O15225 51 aa3.89□□□□□ -1.79
CAPRIN1-209ENST00000530820 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
CAPRIN1-209ENST00000530820 A0A1B0GVY2 172 aa3.83□□□□□ -1.8
CAPRIN1-209ENST00000530820 RYR3Q15413 4870 aa3.79□□□□□ -1.8
CAPRIN1-209ENST00000530820 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
CAPRIN1-209ENST00000530820 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
CAPRIN1-209ENST00000530820 RYR2Q92736 4967 aa3.75□□□□□ -1.81
CAPRIN1-209ENST00000530820 LCE2BO14633 110 aa3.74□□□□□ -1.81
CAPRIN1-209ENST00000530820 RYR1P21817 5038 aa3.74□□□□□ -1.81
CAPRIN1-209ENST00000530820 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
CAPRIN1-209ENST00000530820 MUC2Q02817 5179 aa3.72□□□□□ -1.81
CAPRIN1-209ENST00000530820 EPPK1P58107 5090 aaKnown RBP3.72□□□□□ -1.81
CAPRIN1-209ENST00000530820 Q5VSD8 79 aa3.71□□□□□ -1.82
CAPRIN1-209ENST00000530820 RPS29P62273 56 aaKnown RBP3.69□□□□□ -1.82
CAPRIN1-209ENST00000530820 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
CAPRIN1-209ENST00000530820 PKD1P98161 4303 aa3.67□□□□□ -1.82
CAPRIN1-209ENST00000530820 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
CAPRIN1-209ENST00000530820 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
CAPRIN1-209ENST00000530820 LCE2CQ5TA81 110 aa3.63□□□□□ -1.83
CAPRIN1-209ENST00000530820 PKHD1L1Q86WI1 4243 aa3.61□□□□□ -1.83
CAPRIN1-209ENST00000530820 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
CAPRIN1-209ENST00000530820 KRTAP17-1Q9BYP8 105 aa3.61□□□□□ -1.83
CAPRIN1-209ENST00000530820 TNXBP22105 4242 aa3.54□□□□□ -1.84
CAPRIN1-209ENST00000530820 HERC2O95714 4834 aa3.52□□□□□ -1.85
CAPRIN1-209ENST00000530820 HMCN2Q8NDA2 5059 aa3.52□□□□□ -1.85
CAPRIN1-209ENST00000530820 KRTAP10-4P60372 401 aaPredicted RBP3.5□□□□□ -1.85
CAPRIN1-209ENST00000530820 ABCA13Q86UQ4 5058 aa3.5□□□□□ -1.85
CAPRIN1-209ENST00000530820 KMT2DO14686 5537 aa3.48□□□□□ -1.85
CAPRIN1-209ENST00000530820 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
CAPRIN1-209ENST00000530820 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.85
CAPRIN1-209ENST00000530820 HERC1Q15751 4861 aa3.45□□□□□ -1.86
CAPRIN1-209ENST00000530820 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
CAPRIN1-209ENST00000530820 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
CAPRIN1-209ENST00000530820 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
CAPRIN1-209ENST00000530820 MT1HL1P0DM35 61 aa3.4□□□□□ -1.86
CAPRIN1-209ENST00000530820 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.86
CAPRIN1-209ENST00000530820 KRTAP12-3P60328 96 aa3.4□□□□□ -1.86
CAPRIN1-209ENST00000530820 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
CAPRIN1-209ENST00000530820 M0R2T5 61 aa3.38□□□□□ -1.87
CAPRIN1-209ENST00000530820 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
CAPRIN1-209ENST00000530820 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
CAPRIN1-209ENST00000530820 UBR4Q5T4S7 5183 aa3.31□□□□□ -1.88
CAPRIN1-209ENST00000530820 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
CAPRIN1-209ENST00000530820 FCGBPQ9Y6R7 5405 aaPredicted RBP3.3□□□□□ -1.88
CAPRIN1-209ENST00000530820 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
CAPRIN1-209ENST00000530820 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
CAPRIN1-209ENST00000530820 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
CAPRIN1-209ENST00000530820 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
CAPRIN1-209ENST00000530820 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
CAPRIN1-209ENST00000530820 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
CAPRIN1-209ENST00000530820 USH2AO75445 5202 aa3.21□□□□□ -1.9
CAPRIN1-209ENST00000530820 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
CAPRIN1-209ENST00000530820 KRTAP8-1Q8IUC2 63 aa3.2□□□□□ -1.9
CAPRIN1-209ENST00000530820 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
CAPRIN1-209ENST00000530820 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
CAPRIN1-209ENST00000530820 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
CAPRIN1-209ENST00000530820 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
CAPRIN1-209ENST00000530820 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
CAPRIN1-209ENST00000530820 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
CAPRIN1-209ENST00000530820 KRTAP19-1Q8IUB9 90 aa3.09□□□□□ -1.91
CAPRIN1-209ENST00000530820 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
CAPRIN1-209ENST00000530820 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
CAPRIN1-209ENST00000530820 KRTAP4-8Q9BYQ9 185 aa3.04□□□□□ -1.92
CAPRIN1-209ENST00000530820 LOC100996750A0A140TA64 210 aa3□□□□□ -1.93
CAPRIN1-209ENST00000530820 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
CAPRIN1-209ENST00000530820 MT1XP80297 61 aa2.97□□□□□ -1.93
CAPRIN1-209ENST00000530820 KRTAP19-2Q3LHN2 52 aa2.97□□□□□ -1.93
CAPRIN1-209ENST00000530820 PRM1P04553 51 aa2.95□□□□□ -1.94
CAPRIN1-209ENST00000530820 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
CAPRIN1-209ENST00000530820 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
CAPRIN1-209ENST00000530820 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms