RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 LCA10Q71F78 164 aa6.59□□□□□ -1.35
CAPN1-219ENST00000530495 LINC00643Q86TS7 51 aa6.59□□□□□ -1.35
CAPN1-219ENST00000530495 Q8N9L7 120 aa6.59□□□□□ -1.35
CAPN1-219ENST00000530495 KLKP1Q107X0 134 aa6.58□□□□□ -1.36
CAPN1-219ENST00000530495 C1orf64Q8NEQ6 169 aa6.57□□□□□ -1.36
CAPN1-219ENST00000530495 KMT2DO14686 5537 aa6.53□□□□□ -1.36
CAPN1-219ENST00000530495 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
CAPN1-219ENST00000530495 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
CAPN1-219ENST00000530495 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
CAPN1-219ENST00000530495 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
CAPN1-219ENST00000530495 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
CAPN1-219ENST00000530495 HIST1H4AP62805 103 aaKnown RBP6.45□□□□□ -1.38
CAPN1-219ENST00000530495 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
CAPN1-219ENST00000530495 MT-ATP8P03928 68 aa6.4□□□□□ -1.38
CAPN1-219ENST00000530495 TP53AIP1Q9HCN2 124 aa6.4□□□□□ -1.38
CAPN1-219ENST00000530495 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
CAPN1-219ENST00000530495 A0A087WVE0 104 aa6.37□□□□□ -1.39
CAPN1-219ENST00000530495 SPRR2EP22531 72 aa6.37□□□□□ -1.39
CAPN1-219ENST00000530495 SPRR2BP35325 72 aa6.37□□□□□ -1.39
CAPN1-219ENST00000530495 SPRR2AP35326 72 aa6.37□□□□□ -1.39
CAPN1-219ENST00000530495 CYP4F30PQ9H0H9 118 aa6.34□□□□□ -1.39
CAPN1-219ENST00000530495 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
CAPN1-219ENST00000530495 H0YAA0 97 aa6.3□□□□□ -1.4
CAPN1-219ENST00000530495 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
CAPN1-219ENST00000530495 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
CAPN1-219ENST00000530495 UQCRQO14949 82 aa6.27□□□□□ -1.41
CAPN1-219ENST00000530495 SCGB1A1P11684 91 aa6.27□□□□□ -1.41
CAPN1-219ENST00000530495 MT1XP80297 61 aa6.27□□□□□ -1.41
CAPN1-219ENST00000530495 LCE1AQ5T7P2 110 aa6.26□□□□□ -1.41
CAPN1-219ENST00000530495 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
CAPN1-219ENST00000530495 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
CAPN1-219ENST00000530495 ATOX1O00244 68 aa6.24□□□□□ -1.41
CAPN1-219ENST00000530495 NDUFC1O43677 76 aa6.24□□□□□ -1.41
CAPN1-219ENST00000530495 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
CAPN1-219ENST00000530495 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
CAPN1-219ENST00000530495 LOC101927531A0A1B0GV80 90 aa6.22□□□□□ -1.41
CAPN1-219ENST00000530495 A8MUN3 132 aa6.22□□□□□ -1.41
CAPN1-219ENST00000530495 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
CAPN1-219ENST00000530495 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
CAPN1-219ENST00000530495 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
CAPN1-219ENST00000530495 PLAC4Q8WY50 150 aa6.19□□□□□ -1.42
CAPN1-219ENST00000530495 H0Y9P7 68 aa6.17□□□□□ -1.42
CAPN1-219ENST00000530495 H3BPC8 53 aa6.17□□□□□ -1.42
CAPN1-219ENST00000530495 MP68P56378 58 aa6.17□□□□□ -1.42
CAPN1-219ENST00000530495 SPRR2DP22532 72 aa6.16□□□□□ -1.42
CAPN1-219ENST00000530495 SERP2Q8N6R1 65 aa6.13□□□□□ -1.43
CAPN1-219ENST00000530495 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
CAPN1-219ENST00000530495 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
CAPN1-219ENST00000530495 LINC00208Q96KT6 92 aa6.1□□□□□ -1.43
CAPN1-219ENST00000530495 R4GN34 69 aa6.07□□□□□ -1.44
CAPN1-219ENST00000530495 COX7CP15954 63 aa6.06□□□□□ -1.44
CAPN1-219ENST00000530495 ANAPC13Q9BS18 74 aa6.05□□□□□ -1.44
CAPN1-219ENST00000530495 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
CAPN1-219ENST00000530495 P0C880 135 aa6.01□□□□□ -1.45
CAPN1-219ENST00000530495 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
CAPN1-219ENST00000530495 M0QZ58 72 aa5.99□□□□□ -1.45
CAPN1-219ENST00000530495 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
CAPN1-219ENST00000530495 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
CAPN1-219ENST00000530495 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
CAPN1-219ENST00000530495 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
CAPN1-219ENST00000530495 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
CAPN1-219ENST00000530495 SPANXA2-OT1Q8N9U9 137 aa5.91□□□□□ -1.46
CAPN1-219ENST00000530495 CCDC179H3BU77 68 aa5.88□□□□□ -1.47
CAPN1-219ENST00000530495 DMAC1Q96GE9 116 aa5.87□□□□□ -1.47
CAPN1-219ENST00000530495 H7BZZ5 65 aa5.86□□□□□ -1.47
CAPN1-219ENST00000530495 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
CAPN1-219ENST00000530495 ACYP2P14621 99 aa5.82□□□□□ -1.48
CAPN1-219ENST00000530495 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
CAPN1-219ENST00000530495 PCP4P48539 62 aa5.76□□□□□ -1.49
CAPN1-219ENST00000530495 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
CAPN1-219ENST00000530495 TMEM258P61165 79 aa5.75□□□□□ -1.49
CAPN1-219ENST00000530495 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
CAPN1-219ENST00000530495 CHKB-CPT1BH3BT56 60 aa5.7□□□□□ -1.5
CAPN1-219ENST00000530495 SPTSSBQ8NFR3 76 aa5.7□□□□□ -1.5
CAPN1-219ENST00000530495 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
CAPN1-219ENST00000530495 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
CAPN1-219ENST00000530495 COA5Q86WW8 74 aa5.67□□□□□ -1.5
CAPN1-219ENST00000530495 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
CAPN1-219ENST00000530495 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
CAPN1-219ENST00000530495 MT1EP04732 61 aa5.57□□□□□ -1.52
CAPN1-219ENST00000530495 SERP1Q9Y6X1 66 aa5.55□□□□□ -1.52
CAPN1-219ENST00000530495 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
CAPN1-219ENST00000530495 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
CAPN1-219ENST00000530495 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
CAPN1-219ENST00000530495 SEC61GP60059 68 aa5.46□□□□□ -1.54
CAPN1-219ENST00000530495 MT1GP13640 62 aa5.45□□□□□ -1.54
CAPN1-219ENST00000530495 RPS28P62857 69 aaKnown RBP5.45□□□□□ -1.54
CAPN1-219ENST00000530495 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
CAPN1-219ENST00000530495 MT4P47944 62 aa5.41□□□□□ -1.54
CAPN1-219ENST00000530495 LINC01558Q9Y6Z2 57 aa5.4□□□□□ -1.54
CAPN1-219ENST00000530495 A0A1B0GU69 56 aa5.39□□□□□ -1.55
CAPN1-219ENST00000530495 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
CAPN1-219ENST00000530495 V9GYY9 64 aa5.39□□□□□ -1.55
CAPN1-219ENST00000530495 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
CAPN1-219ENST00000530495 KRTAP19-5Q3LI72 72 aa5.38□□□□□ -1.55
CAPN1-219ENST00000530495 PRR15LQ9BU68 103 aa5.38□□□□□ -1.55
CAPN1-219ENST00000530495 A0A0D9SG42 100 aa5.37□□□□□ -1.55
CAPN1-219ENST00000530495 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
CAPN1-219ENST00000530495 Q1T7F1 81 aa5.34□□□□□ -1.55
CAPN1-219ENST00000530495 MT1MQ8N339 61 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms