RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 FAM186AA6NE01 2351 aa1.29□□□□□ -2.2
ARHGEF12-209ENST00000530388 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
ARHGEF12-209ENST00000530388 ADGRG4Q8IZF6 3080 aa1.29□□□□□ -2.2
ARHGEF12-209ENST00000530388 PRRC2CQ9Y520 2896 aaKnown RBP1.29□□□□□ -2.2
ARHGEF12-209ENST00000530388 STATHP02808 62 aa1.29□□□□□ -2.2
ARHGEF12-209ENST00000530388 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
ARHGEF12-209ENST00000530388 CCDC168Q8NDH2 2452 aa1.28□□□□□ -2.2
ARHGEF12-209ENST00000530388 NCOR2Q9Y618 2525 aa1.28□□□□□ -2.2
ARHGEF12-209ENST00000530388 EPG5Q9HCE0 2579 aa1.27□□□□□ -2.21
ARHGEF12-209ENST00000530388 RIF1Q5UIP0 2472 aaKnown RBP1.27□□□□□ -2.21
ARHGEF12-209ENST00000530388 ATRQ13535 2644 aa1.27□□□□□ -2.21
ARHGEF12-209ENST00000530388 BDP1A6H8Y1 2624 aa1.27□□□□□ -2.21
ARHGEF12-209ENST00000530388 MTORP42345 2549 aa1.27□□□□□ -2.21
ARHGEF12-209ENST00000530388 TEX15Q9BXT5 2789 aa1.26□□□□□ -2.21
ARHGEF12-209ENST00000530388 KIAA1109Q2LD37 5005 aa1.26□□□□□ -2.21
ARHGEF12-209ENST00000530388 DEFB136Q30KP8 78 aa1.26□□□□□ -2.21
ARHGEF12-209ENST00000530388 FAT4Q6V0I7 4981 aa1.25□□□□□ -2.21
ARHGEF12-209ENST00000530388 TENM2Q9NT68 2774 aa1.25□□□□□ -2.21
ARHGEF12-209ENST00000530388 SPG11Q96JI7 2443 aa1.25□□□□□ -2.21
ARHGEF12-209ENST00000530388 DEFB124Q8NES8 71 aa1.25□□□□□ -2.21
ARHGEF12-209ENST00000530388 KRTAP5-5Q701N2 237 aaPredicted RBP1.24□□□□□ -2.21
ARHGEF12-209ENST00000530388 ANK3Q12955 4377 aaKnown RBP1.24□□□□□ -2.21
ARHGEF12-209ENST00000530388 DEFB108BQ8NET1 73 aa1.24□□□□□ -2.21
ARHGEF12-209ENST00000530388 DEFB1P60022 68 aa1.24□□□□□ -2.21
ARHGEF12-209ENST00000530388 SONP18583 2426 aaKnown RBP1.23□□□□□ -2.21
ARHGEF12-209ENST00000530388 PKD1L1Q8TDX9 2849 aa1.23□□□□□ -2.21
ARHGEF12-209ENST00000530388 COX14Q96I36 57 aa1.22□□□□□ -2.21
ARHGEF12-209ENST00000530388 ZANQ9Y493 2812 aa1.22□□□□□ -2.21
ARHGEF12-209ENST00000530388 HUWE1Q7Z6Z7 4374 aaKnown RBP1.22□□□□□ -2.21
ARHGEF12-209ENST00000530388 LRBAP50851 2863 aa1.22□□□□□ -2.21
ARHGEF12-209ENST00000530388 MYO18BQ8IUG5 2567 aa1.21□□□□□ -2.22
ARHGEF12-209ENST00000530388 LRRK2Q5S007 2527 aa1.21□□□□□ -2.22
ARHGEF12-209ENST00000530388 TEP1Q99973 2627 aaKnown RBP1.2□□□□□ -2.22
ARHGEF12-209ENST00000530388 TENM1Q9UKZ4 2725 aa1.2□□□□□ -2.22
ARHGEF12-209ENST00000530388 SACSQ9NZJ4 4579 aa1.19□□□□□ -2.22
ARHGEF12-209ENST00000530388 AKAP13Q12802 2813 aa1.18□□□□□ -2.22
ARHGEF12-209ENST00000530388 ACACBO00763 2458 aa1.18□□□□□ -2.22
ARHGEF12-209ENST00000530388 COL6A5A8TX70 2615 aa1.18□□□□□ -2.22
ARHGEF12-209ENST00000530388 UTP20O75691 2785 aaKnown RBP1.18□□□□□ -2.22
ARHGEF12-209ENST00000530388 RNF213Q63HN8 5207 aa1.17□□□□□ -2.22
ARHGEF12-209ENST00000530388 TGP01266 2768 aa1.17□□□□□ -2.22
ARHGEF12-209ENST00000530388 SRRM2Q9UQ35 2752 aaKnown RBP1.17□□□□□ -2.22
ARHGEF12-209ENST00000530388 SETD2Q9BYW2 2564 aaPredicted RBP1.16□□□□□ -2.22
ARHGEF12-209ENST00000530388 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
ARHGEF12-209ENST00000530388 DEFB133Q30KQ1 61 aa1.16□□□□□ -2.22
ARHGEF12-209ENST00000530388 FAT2Q9NYQ8 4349 aa1.15□□□□□ -2.22
ARHGEF12-209ENST00000530388 SMR3AQ99954 134 aa1.15□□□□□ -2.22
ARHGEF12-209ENST00000530388 HSPG2P98160 4391 aa1.15□□□□□ -2.23
ARHGEF12-209ENST00000530388 A0A096LPF7 62 aa1.15□□□□□ -2.23
ARHGEF12-209ENST00000530388 KRTAP5-1Q6L8H4 278 aa1.15□□□□□ -2.23
ARHGEF12-209ENST00000530388 FASNP49327 2511 aaKnown RBP1.15□□□□□ -2.23
ARHGEF12-209ENST00000530388 LCE3AQ5TA76 89 aa1.14□□□□□ -2.23
ARHGEF12-209ENST00000530388 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
ARHGEF12-209ENST00000530388 MGAM2Q2M2H8 2515 aa1.14□□□□□ -2.23
ARHGEF12-209ENST00000530388 CFAP46Q8IYW2 2715 aa1.14□□□□□ -2.23
ARHGEF12-209ENST00000530388 APCP25054 2843 aa1.14□□□□□ -2.23
ARHGEF12-209ENST00000530388 CD52P31358 61 aa1.14□□□□□ -2.23
ARHGEF12-209ENST00000530388 DYNC2H1Q8NCM8 4307 aaKnown RBP1.14□□□□□ -2.23
ARHGEF12-209ENST00000530388 DCHS2Q6V1P9 2916 aa1.13□□□□□ -2.23
ARHGEF12-209ENST00000530388 SPTBN4Q9H254 2564 aa1.12□□□□□ -2.23
ARHGEF12-209ENST00000530388 SSPOA2VEC9 5147 aa1.11□□□□□ -2.23
ARHGEF12-209ENST00000530388 ANKHD1Q8IWZ3 2542 aaKnown RBP1.1□□□□□ -2.23
ARHGEF12-209ENST00000530388 NBEAL2Q6ZNJ1 2754 aa1.1□□□□□ -2.23
ARHGEF12-209ENST00000530388 ANKRD11Q6UB99 2663 aaPredicted RBP1.1□□□□□ -2.23
ARHGEF12-209ENST00000530388 TNXBP22105 4242 aa1.1□□□□□ -2.23
ARHGEF12-209ENST00000530388 FAT3Q8TDW7 4589 aa1.1□□□□□ -2.23
ARHGEF12-209ENST00000530388 HMCN2Q8NDA2 5059 aa1.09□□□□□ -2.23
ARHGEF12-209ENST00000530388 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
ARHGEF12-209ENST00000530388 MXRA5Q9NR99 2828 aa1.08□□□□□ -2.24
ARHGEF12-209ENST00000530388 PRM1P04553 51 aa1.07□□□□□ -2.24
ARHGEF12-209ENST00000530388 STAB1Q9NY15 2570 aa1.07□□□□□ -2.24
ARHGEF12-209ENST00000530388 PKD1P98161 4303 aa1.06□□□□□ -2.24
ARHGEF12-209ENST00000530388 LCE1CQ5T751 118 aa1.06□□□□□ -2.24
ARHGEF12-209ENST00000530388 LCE1BQ5T7P3 118 aa1.06□□□□□ -2.24
ARHGEF12-209ENST00000530388 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
ARHGEF12-209ENST00000530388 HTN3P15516 51 aa1.06□□□□□ -2.24
ARHGEF12-209ENST00000530388 COL7A1Q02388 2944 aa1.05□□□□□ -2.24
ARHGEF12-209ENST00000530388 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
ARHGEF12-209ENST00000530388 IGSF10Q6WRI0 2623 aa1.05□□□□□ -2.24
ARHGEF12-209ENST00000530388 KRTAP2-3P0C7H8 128 aa1.05□□□□□ -2.24
ARHGEF12-209ENST00000530388 KRTAP2-4Q9BYR9 128 aa1.05□□□□□ -2.24
ARHGEF12-209ENST00000530388 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
ARHGEF12-209ENST00000530388 TACC2O95359 2948 aa1.04□□□□□ -2.24
ARHGEF12-209ENST00000530388 USP9XQ93008 2570 aaPredicted RBP1.03□□□□□ -2.24
ARHGEF12-209ENST00000530388 LINC01556Q5JQF7 62 aa1.02□□□□□ -2.25
ARHGEF12-209ENST00000530388 TLN1Q9Y490 2541 aaKnown RBP1.02□□□□□ -2.25
ARHGEF12-209ENST00000530388 NOTCH1P46531 2555 aa1.02□□□□□ -2.25
ARHGEF12-209ENST00000530388 DNAH9Q9NYC9 4486 aa1.01□□□□□ -2.25
ARHGEF12-209ENST00000530388 MYCBP2O75592 4640 aa1.01□□□□□ -2.25
ARHGEF12-209ENST00000530388 ITPR3Q14573 2671 aa1.01□□□□□ -2.25
ARHGEF12-209ENST00000530388 NBEAL1Q6ZS30 2694 aa1□□□□□ -2.25
ARHGEF12-209ENST00000530388 VPS13BQ7Z7G8 4022 aa1□□□□□ -2.25
ARHGEF12-209ENST00000530388 NSD1Q96L73 2696 aaPredicted RBP0.99□□□□□ -2.25
ARHGEF12-209ENST00000530388 MAP1AP78559 2803 aaPredicted RBP0.99□□□□□ -2.25
ARHGEF12-209ENST00000530388 TLN2Q9Y4G6 2542 aa0.99□□□□□ -2.25
ARHGEF12-209ENST00000530388 LRP1Q07954 4544 aaKnown RBP0.98□□□□□ -2.25
ARHGEF12-209ENST00000530388 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
ARHGEF12-209ENST00000530388 ITPR2Q14571 2701 aa0.98□□□□□ -2.25
ARHGEF12-209ENST00000530388 TENM3Q9P273 2699 aa0.98□□□□□ -2.25
ARHGEF12-209ENST00000530388 VPS13DQ5THJ4 4388 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms