RNA–Protein interactions for RNA: ENST00000530388.1

ARHGEF12-209, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 1 (best)

Gene ARHGEF12, Length 4,309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-209ENST00000530388 CHIC1Q5VXU3 224 aa9.59□□□□□ -0.87
ARHGEF12-209ENST00000530388 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
ARHGEF12-209ENST00000530388 PHF23Q9BUL5 403 aaPredicted RBP8.79□□□□□ -1
ARHGEF12-209ENST00000530388 EHMT2Q96KQ7 1210 aa8.35□□□□□ -1.07
ARHGEF12-209ENST00000530388 SLC24A1O60721 1099 aa8.14□□□□□ -1.11
ARHGEF12-209ENST00000530388 PLPPR3Q6T4P5 718 aa8.05□□□□□ -1.12
ARHGEF12-209ENST00000530388 KCNA4P22459 653 aa8.03□□□□□ -1.12
ARHGEF12-209ENST00000530388 CSRNP3Q8WYN3 585 aa7.92□□□□□ -1.14
ARHGEF12-209ENST00000530388 ADRA2BP18089 450 aa7.9□□□□□ -1.14
ARHGEF12-209ENST00000530388 RTN4Q9NQC3 1192 aaKnown RBP7.76□□□□□ -1.17
ARHGEF12-209ENST00000530388 PPP6R1Q9UPN7 881 aa7.61□□□□□ -1.19
ARHGEF12-209ENST00000530388 ZBTB22O15209 634 aa7.57□□□□□ -1.2
ARHGEF12-209ENST00000530388 SLC4A1APQ9BWU0 796 aaKnown RBP7.54□□□□□ -1.2
ARHGEF12-209ENST00000530388 SENP3Q9H4L4 574 aaPredicted RBP7.47□□□□□ -1.21
ARHGEF12-209ENST00000530388 AMER1Q5JTC6 1135 aaPredicted RBP7.43□□□□□ -1.22
ARHGEF12-209ENST00000530388 PRKCSHP14314 528 aaPredicted RBP7.29□□□□□ -1.24
ARHGEF12-209ENST00000530388 NPM3O75607 178 aaKnown RBP7.27□□□□□ -1.25
ARHGEF12-209ENST00000530388 DAXXQ9UER7 740 aaPredicted RBP7.26□□□□□ -1.25
ARHGEF12-209ENST00000530388 NCBP3Q53F19 620 aaKnown RBP7.24□□□□□ -1.25
ARHGEF12-209ENST00000530388 PPP4R3CPQ6ZMV5 832 aa7.22□□□□□ -1.25
ARHGEF12-209ENST00000530388 FOXD1Q16676 465 aa7.15□□□□□ -1.26
ARHGEF12-209ENST00000530388 RANGAP1P46060 587 aaPredicted RBP7.09□□□□□ -1.27
ARHGEF12-209ENST00000530388 FKBP8Q14318 412 aa7.01□□□□□ -1.29
ARHGEF12-209ENST00000530388 BCANQ96GW7 911 aa6.97□□□□□ -1.29
ARHGEF12-209ENST00000530388 ARXQ96QS3 562 aa6.97□□□□□ -1.29
ARHGEF12-209ENST00000530388 PELP1Q8IZL8 1130 aaKnown RBP6.94□□□□□ -1.3
ARHGEF12-209ENST00000530388 MYT1Q01538 1121 aa6.93□□□□□ -1.3
ARHGEF12-209ENST00000530388 TAOK2Q9UL54 1235 aa6.93□□□□□ -1.3
ARHGEF12-209ENST00000530388 FOXD4L1Q9NU39 408 aa6.92□□□□□ -1.3
ARHGEF12-209ENST00000530388 TTBK1Q5TCY1 1321 aaPredicted RBP6.92□□□□□ -1.3
ARHGEF12-209ENST00000530388 TIMELESSQ9UNS1 1208 aa6.91□□□□□ -1.3
ARHGEF12-209ENST00000530388 PLCB2Q00722 1185 aa6.9□□□□□ -1.31
ARHGEF12-209ENST00000530388 HAP1P54257 671 aaPredicted RBP6.89□□□□□ -1.31
ARHGEF12-209ENST00000530388 ERICH6Q7L0X2 663 aa6.88□□□□□ -1.31
ARHGEF12-209ENST00000530388 HOMEZQ8IX15 550 aa6.87□□□□□ -1.31
ARHGEF12-209ENST00000530388 TPRNQ4KMQ1 711 aa6.86□□□□□ -1.31
ARHGEF12-209ENST00000530388 TULP1O00294 542 aaPredicted RBP6.85□□□□□ -1.31
ARHGEF12-209ENST00000530388 PIAS4Q8N2W9 510 aaPredicted RBP6.8□□□□□ -1.32
ARHGEF12-209ENST00000530388 KDM2AQ9Y2K7 1162 aa6.8□□□□□ -1.32
ARHGEF12-209ENST00000530388 DCAF8L2P0C7V8 631 aa6.79□□□□□ -1.32
ARHGEF12-209ENST00000530388 FBLN2P98095 1184 aa6.78□□□□□ -1.32
ARHGEF12-209ENST00000530388 SLC4A2P04920 1241 aa6.75□□□□□ -1.33
ARHGEF12-209ENST00000530388 MAPK8IP2Q13387 824 aaPredicted RBP6.74□□□□□ -1.33
ARHGEF12-209ENST00000530388 CNKSR2Q8WXI2 1034 aa6.73□□□□□ -1.33
ARHGEF12-209ENST00000530388 PODXL2Q9NZ53 605 aa6.68□□□□□ -1.34
ARHGEF12-209ENST00000530388 GTF3C3Q9Y5Q9 886 aa6.68□□□□□ -1.34
ARHGEF12-209ENST00000530388 ATF5Q9Y2D1 282 aaPredicted RBP6.66□□□□□ -1.34
ARHGEF12-209ENST00000530388 C14orf37Q86TY3 774 aa6.65□□□□□ -1.34
ARHGEF12-209ENST00000530388 VSIG10Q8N0Z9 540 aa6.59□□□□□ -1.35
ARHGEF12-209ENST00000530388 DNAJC5BQ9UF47 199 aa6.59□□□□□ -1.36
ARHGEF12-209ENST00000530388 NPM1P06748 294 aaKnown RBP eCLIP6.58□□□□□ -1.36
ARHGEF12-209ENST00000530388 PKD2Q13563 968 aa6.57□□□□□ -1.36
ARHGEF12-209ENST00000530388 APLP2Q06481 763 aa6.54□□□□□ -1.36
ARHGEF12-209ENST00000530388 NPM2Q86SE8 214 aaKnown RBP6.53□□□□□ -1.36
ARHGEF12-209ENST00000530388 IFNLR1Q8IU57 520 aaPredicted RBP6.52□□□□□ -1.37
ARHGEF12-209ENST00000530388 NBR1Q14596 966 aa6.5□□□□□ -1.37
ARHGEF12-209ENST00000530388 TSHZ2Q9NRE2 1034 aa6.49□□□□□ -1.37
ARHGEF12-209ENST00000530388 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.47□□□□□ -1.37
ARHGEF12-209ENST00000530388 TMEM132AQ24JP5 1023 aa6.46□□□□□ -1.38
ARHGEF12-209ENST00000530388 PAXIP1Q6ZW49 1069 aaPredicted RBP6.45□□□□□ -1.38
ARHGEF12-209ENST00000530388 RNF216Q9NWF9 866 aaPredicted RBP6.45□□□□□ -1.38
ARHGEF12-209ENST00000530388 EIF5BO60841 1220 aaKnown RBP6.44□□□□□ -1.38
ARHGEF12-209ENST00000530388 ATXN8OSP0DMR3 200 aa6.44□□□□□ -1.38
ARHGEF12-209ENST00000530388 CFAP44Q96MT7 982 aa6.43□□□□□ -1.38
ARHGEF12-209ENST00000530388 SUPT5HO00267 1087 aaKnown RBP6.43□□□□□ -1.38
ARHGEF12-209ENST00000530388 FBXO3Q9UK99 471 aa6.42□□□□□ -1.38
ARHGEF12-209ENST00000530388 MYCNP04198 464 aaPredicted RBP6.42□□□□□ -1.38
ARHGEF12-209ENST00000530388 KLHL34Q8N239 644 aa6.42□□□□□ -1.38
ARHGEF12-209ENST00000530388 VASPP50552 380 aaPredicted RBP6.39□□□□□ -1.39
ARHGEF12-209ENST00000530388 TRHP20396 242 aaPredicted RBP6.37□□□□□ -1.39
ARHGEF12-209ENST00000530388 SCAF1Q9H7N4 1312 aaKnown RBP6.34□□□□□ -1.39
ARHGEF12-209ENST00000530388 RGL2O15211 777 aa6.33□□□□□ -1.4
ARHGEF12-209ENST00000530388 MKRN4PQ13434 485 aaPredicted RBP6.3□□□□□ -1.4
ARHGEF12-209ENST00000530388 HOXD11P31277 338 aaPredicted RBP6.3□□□□□ -1.4
ARHGEF12-209ENST00000530388 BBXQ8WY36 941 aaPredicted RBP6.3□□□□□ -1.4
ARHGEF12-209ENST00000530388 UBTFP17480 764 aaKnown RBP6.29□□□□□ -1.4
ARHGEF12-209ENST00000530388 PROM2Q8N271 834 aa6.29□□□□□ -1.4
ARHGEF12-209ENST00000530388 DNAJC5Q9H3Z4 198 aa6.26□□□□□ -1.41
ARHGEF12-209ENST00000530388 SPDYE4A6NLX3 237 aa6.26□□□□□ -1.41
ARHGEF12-209ENST00000530388 TRIM26Q12899 539 aaPredicted RBP6.25□□□□□ -1.41
ARHGEF12-209ENST00000530388 HRCP23327 699 aa6.25□□□□□ -1.41
ARHGEF12-209ENST00000530388 HMGB1P09429 215 aaKnown RBP6.22□□□□□ -1.41
ARHGEF12-209ENST00000530388 CCDC9Q9Y3X0 531 aaKnown RBP6.22□□□□□ -1.41
ARHGEF12-209ENST00000530388 CDK11BP21127 795 aaKnown RBP6.21□□□□□ -1.42
ARHGEF12-209ENST00000530388 CDK11AQ9UQ88 783 aaPredicted RBP6.21□□□□□ -1.42
ARHGEF12-209ENST00000530388 ECM2O94769 699 aaPredicted RBP6.21□□□□□ -1.42
ARHGEF12-209ENST00000530388 SPRYD3Q8NCJ5 442 aa6.2□□□□□ -1.42
ARHGEF12-209ENST00000530388 ZBTB7CA1YPR0 619 aa6.2□□□□□ -1.42
ARHGEF12-209ENST00000530388 ARID3AQ99856 593 aa6.19□□□□□ -1.42
ARHGEF12-209ENST00000530388 DMRT2Q9Y5R5 561 aa6.16□□□□□ -1.42
ARHGEF12-209ENST00000530388 NKX1-1Q15270 411 aaPredicted RBP6.15□□□□□ -1.42
ARHGEF12-209ENST00000530388 CHGAP10645 457 aaKnown RBP6.15□□□□□ -1.43
ARHGEF12-209ENST00000530388 BRPF1P55201 1214 aaPredicted RBP6.14□□□□□ -1.43
ARHGEF12-209ENST00000530388 U3KPZ7 1027 aaPredicted RBP6.14□□□□□ -1.43
ARHGEF12-209ENST00000530388 ZNF219Q9P2Y4 722 aaPredicted RBP6.12□□□□□ -1.43
ARHGEF12-209ENST00000530388 RNF25Q96BH1 459 aaPredicted RBP6.1□□□□□ -1.43
ARHGEF12-209ENST00000530388 C1orf115Q9H7X2 142 aa6.08□□□□□ -1.44
ARHGEF12-209ENST00000530388 PDIA4P13667 645 aaKnown RBP6.07□□□□□ -1.44
ARHGEF12-209ENST00000530388 POLR3GLQ9BT43 218 aa6.07□□□□□ -1.44
ARHGEF12-209ENST00000530388 SHROOM4Q9ULL8 1493 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms