RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
CCDC90B-214ENST00000529689 LRP1BQ9NZR2 4599 aa5.03□□□□□ -1.6
CCDC90B-214ENST00000529689 DNAH17Q9UFH2 4485 aa5.02□□□□□ -1.61
CCDC90B-214ENST00000529689 KMT2CQ8NEZ4 4911 aaKnown RBP5.02□□□□□ -1.61
CCDC90B-214ENST00000529689 DNAH5Q8TE73 4624 aa4.99□□□□□ -1.61
CCDC90B-214ENST00000529689 HECTD4Q9Y4D8 3996 aa4.98□□□□□ -1.61
CCDC90B-214ENST00000529689 KRTAP13-4Q3LI77 160 aa4.98□□□□□ -1.61
CCDC90B-214ENST00000529689 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
CCDC90B-214ENST00000529689 MYCBP2O75592 4640 aa4.93□□□□□ -1.62
CCDC90B-214ENST00000529689 FAT2Q9NYQ8 4349 aa4.93□□□□□ -1.62
CCDC90B-214ENST00000529689 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
CCDC90B-214ENST00000529689 DYNC2H1Q8NCM8 4307 aaKnown RBP4.92□□□□□ -1.62
CCDC90B-214ENST00000529689 VPS13BQ7Z7G8 4022 aa4.91□□□□□ -1.62
CCDC90B-214ENST00000529689 TPRXLQ17RH7 258 aa4.9□□□□□ -1.62
CCDC90B-214ENST00000529689 SACSQ9NZJ4 4579 aa4.88□□□□□ -1.63
CCDC90B-214ENST00000529689 KIAA1109Q2LD37 5005 aa4.87□□□□□ -1.63
CCDC90B-214ENST00000529689 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
CCDC90B-214ENST00000529689 LRP1Q07954 4544 aaKnown RBP4.86□□□□□ -1.63
CCDC90B-214ENST00000529689 DYNC1H1Q14204 4646 aaKnown RBP4.86□□□□□ -1.63
CCDC90B-214ENST00000529689 KRTAP10-4P60372 401 aaPredicted RBP4.85□□□□□ -1.63
CCDC90B-214ENST00000529689 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
CCDC90B-214ENST00000529689 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.63
CCDC90B-214ENST00000529689 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
CCDC90B-214ENST00000529689 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
CCDC90B-214ENST00000529689 APOBP04114 4563 aaKnown RBP4.79□□□□□ -1.64
CCDC90B-214ENST00000529689 RYR3Q15413 4870 aa4.78□□□□□ -1.64
CCDC90B-214ENST00000529689 A0A0A0MQY5 61 aa4.77□□□□□ -1.65
CCDC90B-214ENST00000529689 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
CCDC90B-214ENST00000529689 ALMS1Q8TCU4 4167 aa4.76□□□□□ -1.65
CCDC90B-214ENST00000529689 TNP1P09430 55 aa4.75□□□□□ -1.65
CCDC90B-214ENST00000529689 RYR1P21817 5038 aa4.75□□□□□ -1.65
CCDC90B-214ENST00000529689 PKD1P98161 4303 aa4.73□□□□□ -1.65
CCDC90B-214ENST00000529689 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
CCDC90B-214ENST00000529689 RYR2Q92736 4967 aa4.71□□□□□ -1.66
CCDC90B-214ENST00000529689 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
CCDC90B-214ENST00000529689 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
CCDC90B-214ENST00000529689 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
CCDC90B-214ENST00000529689 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
CCDC90B-214ENST00000529689 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
CCDC90B-214ENST00000529689 HSPG2P98160 4391 aa4.59□□□□□ -1.67
CCDC90B-214ENST00000529689 LRP2P98164 4655 aa4.58□□□□□ -1.68
CCDC90B-214ENST00000529689 LPAP08519 4548 aa4.54□□□□□ -1.68
CCDC90B-214ENST00000529689 MUC2Q02817 5179 aa4.53□□□□□ -1.68
CCDC90B-214ENST00000529689 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
CCDC90B-214ENST00000529689 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
CCDC90B-214ENST00000529689 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
CCDC90B-214ENST00000529689 HERC2O95714 4834 aa4.46□□□□□ -1.7
CCDC90B-214ENST00000529689 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
CCDC90B-214ENST00000529689 HERC1Q15751 4861 aa4.41□□□□□ -1.7
CCDC90B-214ENST00000529689 LCE2DQ5TA82 110 aaPredicted RBP4.41□□□□□ -1.7
CCDC90B-214ENST00000529689 RNF213Q63HN8 5207 aa4.4□□□□□ -1.71
CCDC90B-214ENST00000529689 PCLOQ9Y6V0 5065 aa4.38□□□□□ -1.71
CCDC90B-214ENST00000529689 TNXBP22105 4242 aa4.33□□□□□ -1.72
CCDC90B-214ENST00000529689 FAT4Q6V0I7 4981 aa4.3□□□□□ -1.72
CCDC90B-214ENST00000529689 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
CCDC90B-214ENST00000529689 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
CCDC90B-214ENST00000529689 PRO2289Q9P1D8 64 aa4.22□□□□□ -1.73
CCDC90B-214ENST00000529689 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
CCDC90B-214ENST00000529689 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
CCDC90B-214ENST00000529689 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
CCDC90B-214ENST00000529689 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
CCDC90B-214ENST00000529689 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
CCDC90B-214ENST00000529689 MT1HP80294 61 aa4.04□□□□□ -1.76
CCDC90B-214ENST00000529689 MT2AP02795 61 aa4.02□□□□□ -1.77
CCDC90B-214ENST00000529689 MT1FP04733 61 aa4.02□□□□□ -1.77
CCDC90B-214ENST00000529689 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
CCDC90B-214ENST00000529689 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
CCDC90B-214ENST00000529689 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
CCDC90B-214ENST00000529689 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
CCDC90B-214ENST00000529689 LCE2BO14633 110 aa3.93□□□□□ -1.78
CCDC90B-214ENST00000529689 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
CCDC90B-214ENST00000529689 USH2AO75445 5202 aa3.91□□□□□ -1.78
CCDC90B-214ENST00000529689 MUC17Q685J3 4493 aa3.9□□□□□ -1.78
CCDC90B-214ENST00000529689 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
CCDC90B-214ENST00000529689 LCE2CQ5TA81 110 aa3.86□□□□□ -1.79
CCDC90B-214ENST00000529689 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
CCDC90B-214ENST00000529689 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
CCDC90B-214ENST00000529689 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
CCDC90B-214ENST00000529689 INE1O15225 51 aa3.8□□□□□ -1.8
CCDC90B-214ENST00000529689 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
CCDC90B-214ENST00000529689 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
CCDC90B-214ENST00000529689 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
CCDC90B-214ENST00000529689 MT1XP80297 61 aa3.76□□□□□ -1.81
CCDC90B-214ENST00000529689 MT1BP07438 61 aa3.75□□□□□ -1.81
CCDC90B-214ENST00000529689 KRTAP10-5P60370 271 aa3.74□□□□□ -1.81
CCDC90B-214ENST00000529689 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
CCDC90B-214ENST00000529689 KMT2DO14686 5537 aa3.71□□□□□ -1.82
CCDC90B-214ENST00000529689 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.82
CCDC90B-214ENST00000529689 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.82
CCDC90B-214ENST00000529689 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
CCDC90B-214ENST00000529689 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
CCDC90B-214ENST00000529689 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
CCDC90B-214ENST00000529689 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
CCDC90B-214ENST00000529689 KRTAP9-3Q9BYQ3 159 aa3.62□□□□□ -1.83
CCDC90B-214ENST00000529689 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
CCDC90B-214ENST00000529689 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
CCDC90B-214ENST00000529689 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
CCDC90B-214ENST00000529689 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
CCDC90B-214ENST00000529689 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
CCDC90B-214ENST00000529689 MT1GP13640 62 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms