RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 CELSR3Q9NYQ7 3312 aa1.13□□□□□ -2.23
SOX6-212ENST00000529469 DNAH8Q96JB1 4490 aa1.13□□□□□ -2.23
SOX6-212ENST00000529469 LAMA5O15230 3695 aa1.13□□□□□ -2.23
SOX6-212ENST00000529469 FAM186AA6NE01 2351 aa1.13□□□□□ -2.23
SOX6-212ENST00000529469 DNAH3Q8TD57 4116 aa1.13□□□□□ -2.23
SOX6-212ENST00000529469 UBR4Q5T4S7 5183 aa1.12□□□□□ -2.23
SOX6-212ENST00000529469 SACSQ9NZJ4 4579 aa1.12□□□□□ -2.23
SOX6-212ENST00000529469 CSMD3Q7Z407 3707 aa1.12□□□□□ -2.23
SOX6-212ENST00000529469 DMXL2Q8TDJ6 3036 aa1.12□□□□□ -2.23
SOX6-212ENST00000529469 KMT2AQ03164 3969 aa1.12□□□□□ -2.23
SOX6-212ENST00000529469 NIPBLQ6KC79 2804 aaeCLIP1.12□□□□□ -2.23
SOX6-212ENST00000529469 HIVEP3Q5T1R4 2406 aa1.11□□□□□ -2.23
SOX6-212ENST00000529469 TEX15Q9BXT5 2789 aa1.11□□□□□ -2.23
SOX6-212ENST00000529469 POLQO75417 2590 aa1.11□□□□□ -2.23
SOX6-212ENST00000529469 CFAP46Q8IYW2 2715 aa1.11□□□□□ -2.23
SOX6-212ENST00000529469 RIF1Q5UIP0 2472 aaKnown RBP1.11□□□□□ -2.23
SOX6-212ENST00000529469 ATRQ13535 2644 aa1.11□□□□□ -2.23
SOX6-212ENST00000529469 USP34Q70CQ2 3546 aa1.11□□□□□ -2.23
SOX6-212ENST00000529469 UNC80Q8N2C7 3258 aa1.11□□□□□ -2.23
SOX6-212ENST00000529469 FREM2Q5SZK8 3169 aa1.1□□□□□ -2.23
SOX6-212ENST00000529469 LAMA1P25391 3075 aa1.1□□□□□ -2.23
SOX6-212ENST00000529469 UTP20O75691 2785 aaKnown RBP1.1□□□□□ -2.23
SOX6-212ENST00000529469 SPTAN1Q13813 2472 aaKnown RBP1.1□□□□□ -2.23
SOX6-212ENST00000529469 M0R2T5 61 aa1.1□□□□□ -2.23
SOX6-212ENST00000529469 SONP18583 2426 aaKnown RBP1.1□□□□□ -2.23
SOX6-212ENST00000529469 NBEAL2Q6ZNJ1 2754 aa1.1□□□□□ -2.23
SOX6-212ENST00000529469 ZNF469Q96JG9 3925 aaPredicted RBP1.1□□□□□ -2.23
SOX6-212ENST00000529469 APCP25054 2843 aa1.1□□□□□ -2.23
SOX6-212ENST00000529469 DNAH7Q8WXX0 4024 aa1.1□□□□□ -2.23
SOX6-212ENST00000529469 CSMD1Q96PZ7 3565 aa1.09□□□□□ -2.23
SOX6-212ENST00000529469 TRRAPQ9Y4A5 3859 aa1.09□□□□□ -2.24
SOX6-212ENST00000529469 EP400Q96L91 3159 aa1.09□□□□□ -2.24
SOX6-212ENST00000529469 ANK2Q01484 3957 aa1.09□□□□□ -2.24
SOX6-212ENST00000529469 FLNCQ14315 2725 aa1.09□□□□□ -2.24
SOX6-212ENST00000529469 PCLOQ9Y6V0 5065 aa1.09□□□□□ -2.24
SOX6-212ENST00000529469 RYR1P21817 5038 aa1.08□□□□□ -2.24
SOX6-212ENST00000529469 RPS29P62273 56 aaKnown RBP1.08□□□□□ -2.24
SOX6-212ENST00000529469 TGP01266 2768 aa1.08□□□□□ -2.24
SOX6-212ENST00000529469 KIAA1109Q2LD37 5005 aa1.07□□□□□ -2.24
SOX6-212ENST00000529469 LOC400499M0QZD8 3231 aa1.07□□□□□ -2.24
SOX6-212ENST00000529469 ZFYVE26Q68DK2 2539 aa1.07□□□□□ -2.24
SOX6-212ENST00000529469 MXRA5Q9NR99 2828 aa1.07□□□□□ -2.24
SOX6-212ENST00000529469 TENM4Q6N022 2769 aa1.06□□□□□ -2.24
SOX6-212ENST00000529469 PKD1L1Q8TDX9 2849 aa1.06□□□□□ -2.24
SOX6-212ENST00000529469 ZANQ9Y493 2812 aa1.06□□□□□ -2.24
SOX6-212ENST00000529469 TACC2O95359 2948 aa1.06□□□□□ -2.24
SOX6-212ENST00000529469 MUC3AQ02505 3323 aa1.06□□□□□ -2.24
SOX6-212ENST00000529469 CMYA5Q8N3K9 4069 aa1.06□□□□□ -2.24
SOX6-212ENST00000529469 DNHD1Q96M86 4753 aa1.05□□□□□ -2.24
SOX6-212ENST00000529469 FLGP20930 4061 aaPredicted RBP1.05□□□□□ -2.24
SOX6-212ENST00000529469 ACACBO00763 2458 aa1.05□□□□□ -2.24
SOX6-212ENST00000529469 XIRP2A4UGR9 3374 aa1.05□□□□□ -2.24
SOX6-212ENST00000529469 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
SOX6-212ENST00000529469 IGSF10Q6WRI0 2623 aa1.05□□□□□ -2.24
SOX6-212ENST00000529469 FBN2P35556 2912 aa1.05□□□□□ -2.24
SOX6-212ENST00000529469 PRKDCP78527 4128 aaKnown RBP1.04□□□□□ -2.24
SOX6-212ENST00000529469 NBEAL1Q6ZS30 2694 aa1.04□□□□□ -2.24
SOX6-212ENST00000529469 DYNC2H1Q8NCM8 4307 aaKnown RBP1.04□□□□□ -2.24
SOX6-212ENST00000529469 CENPEQ02224 2701 aa1.04□□□□□ -2.24
SOX6-212ENST00000529469 DNAH2Q9P225 4427 aa1.04□□□□□ -2.24
SOX6-212ENST00000529469 KRTAP2-3P0C7H8 128 aa1.04□□□□□ -2.24
SOX6-212ENST00000529469 KRTAP2-4Q9BYR9 128 aa1.04□□□□□ -2.24
SOX6-212ENST00000529469 KRTAP2-1Q9BYU5 128 aa1.04□□□□□ -2.24
SOX6-212ENST00000529469 FLNAP21333 2647 aaKnown RBP1.03□□□□□ -2.24
SOX6-212ENST00000529469 HECTD4Q9Y4D8 3996 aa1.03□□□□□ -2.24
SOX6-212ENST00000529469 PKHD1L1Q86WI1 4243 aa1.03□□□□□ -2.24
SOX6-212ENST00000529469 LAMA3Q16787 3333 aa1.03□□□□□ -2.24
SOX6-212ENST00000529469 SMR3AQ99954 134 aa1.03□□□□□ -2.24
SOX6-212ENST00000529469 CEP295Q9C0D2 2601 aa1.03□□□□□ -2.24
SOX6-212ENST00000529469 CSMD2Q7Z408 3487 aa1.03□□□□□ -2.24
SOX6-212ENST00000529469 ITPR2Q14571 2701 aa1.02□□□□□ -2.25
SOX6-212ENST00000529469 SVEP1Q4LDE5 3571 aa1.02□□□□□ -2.25
SOX6-212ENST00000529469 HRNRQ86YZ3 2850 aaPredicted RBP1.02□□□□□ -2.25
SOX6-212ENST00000529469 TLN1Q9Y490 2541 aaKnown RBP1.02□□□□□ -2.25
SOX6-212ENST00000529469 ACANP16112 2415 aa1.01□□□□□ -2.25
SOX6-212ENST00000529469 BRCA2P51587 3418 aa1.01□□□□□ -2.25
SOX6-212ENST00000529469 HIVEP1P15822 2718 aa1.01□□□□□ -2.25
SOX6-212ENST00000529469 WDFY3Q8IZQ1 3526 aa1.01□□□□□ -2.25
SOX6-212ENST00000529469 DNAH10Q8IVF4 4471 aa1.01□□□□□ -2.25
SOX6-212ENST00000529469 KRTAP8-1Q8IUC2 63 aa1□□□□□ -2.25
SOX6-212ENST00000529469 DNAH6Q9C0G6 4158 aa1□□□□□ -2.25
SOX6-212ENST00000529469 CUBNO60494 3623 aa1□□□□□ -2.25
SOX6-212ENST00000529469 MTORP42345 2549 aa0.99□□□□□ -2.25
SOX6-212ENST00000529469 FAT2Q9NYQ8 4349 aa0.99□□□□□ -2.25
SOX6-212ENST00000529469 DNAH9Q9NYC9 4486 aa0.99□□□□□ -2.25
SOX6-212ENST00000529469 DNAH14Q0VDD8 3507 aa0.99□□□□□ -2.25
SOX6-212ENST00000529469 DNAH1Q9P2D7 4330 aa0.99□□□□□ -2.25
SOX6-212ENST00000529469 ADGRG4Q8IZF6 3080 aa0.99□□□□□ -2.25
SOX6-212ENST00000529469 RYR3Q15413 4870 aa0.98□□□□□ -2.25
SOX6-212ENST00000529469 TENM3Q9P273 2699 aa0.98□□□□□ -2.25
SOX6-212ENST00000529469 MUC2Q02817 5179 aa0.98□□□□□ -2.25
SOX6-212ENST00000529469 ANK3Q12955 4377 aaKnown RBP0.97□□□□□ -2.25
SOX6-212ENST00000529469 MYO15AQ9UKN7 3530 aa0.97□□□□□ -2.25
SOX6-212ENST00000529469 PKD1P98161 4303 aa0.97□□□□□ -2.25
SOX6-212ENST00000529469 VPS13CQ709C8 3753 aa0.97□□□□□ -2.25
SOX6-212ENST00000529469 FAT3Q8TDW7 4589 aa0.97□□□□□ -2.25
SOX6-212ENST00000529469 APOBP04114 4563 aaKnown RBP0.97□□□□□ -2.25
SOX6-212ENST00000529469 GPR98Q8WXG9 6306 aa0.97□□□□□ -2.25
SOX6-212ENST00000529469 BIRC6Q9NR09 4857 aa0.97□□□□□ -2.25
SOX6-212ENST00000529469 STAB2Q8WWQ8 2551 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms