RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	UQCRQ	O14949	82 aa		5.37	□□□□□ -1.55
PSMC3-205	ENST00000528362	FAM236A	A0A1B0GUQ0	79 aa		5.36	□□□□□ -1.55
PSMC3-205	ENST00000528362	FAM236B	A0A1B0GV22	79 aa		5.36	□□□□□ -1.55
PSMC3-205	ENST00000528362		H0Y9P7	68 aa		5.34	□□□□□ -1.55
PSMC3-205	ENST00000528362	ATOX1	O00244	68 aa		5.33	□□□□□ -1.56
PSMC3-205	ENST00000528362	MT-ATP8	P03928	68 aa		5.33	□□□□□ -1.56
PSMC3-205	ENST00000528362	SPRR2G	Q9BYE4	73 aa		5.3	□□□□□ -1.56
PSMC3-205	ENST00000528362	IMUP	Q9GZP8	106 aa		5.3	□□□□□ -1.56
PSMC3-205	ENST00000528362	SCGB1A1	P11684	91 aa		5.29	□□□□□ -1.56
PSMC3-205	ENST00000528362	MT1B	P07438	61 aa		5.28	□□□□□ -1.56
PSMC3-205	ENST00000528362	KLKP1	Q107X0	134 aa		5.28	□□□□□ -1.56
PSMC3-205	ENST00000528362	KRTAP19-8	Q3LI54	63 aa		5.27	□□□□□ -1.57
PSMC3-205	ENST00000528362	KRTAP6-3	Q3LI67	103 aa		5.27	□□□□□ -1.57
PSMC3-205	ENST00000528362	OCR1	Q9BZK8	76 aa		5.27	□□□□□ -1.57
PSMC3-205	ENST00000528362	LINC00208	Q96KT6	92 aa		5.26	□□□□□ -1.57
PSMC3-205	ENST00000528362		Q5VV11	94 aa		5.25	□□□□□ -1.57
PSMC3-205	ENST00000528362	NDUFC1	O43677	76 aa		5.23	□□□□□ -1.57
PSMC3-205	ENST00000528362		A8MUN3	132 aa		5.22	□□□□□ -1.57
PSMC3-205	ENST00000528362	MP68	P56378	58 aa		5.22	□□□□□ -1.57
PSMC3-205	ENST00000528362		H0YAA0	97 aa		5.19	□□□□□ -1.58
PSMC3-205	ENST00000528362	SMIM20	Q8N5G0	67 aa		5.19	□□□□□ -1.58
PSMC3-205	ENST00000528362	CRIPT	Q9P021	101 aa		5.19	□□□□□ -1.58
PSMC3-205	ENST00000528362		A6NN06	94 aa		5.18	□□□□□ -1.58
PSMC3-205	ENST00000528362	NEB	P20929	6669 aa		5.18	□□□□□ -1.58
PSMC3-205	ENST00000528362		H3BPC8	53 aa		5.16	□□□□□ -1.58
PSMC3-205	ENST00000528362	TRAV7	A0A075B6U4	112 aa		5.15	□□□□□ -1.59
PSMC3-205	ENST00000528362	KRTAP10-5	P60370	271 aa		5.14	□□□□□ -1.59
PSMC3-205	ENST00000528362	ADM2	Q7Z4H4	148 aa		5.13	□□□□□ -1.59
PSMC3-205	ENST00000528362	MUC12	Q9UKN1	5478 aa		5.12	□□□□□ -1.59
PSMC3-205	ENST00000528362	DMAC1	Q96GE9	116 aa		5.1	□□□□□ -1.59
PSMC3-205	ENST00000528362	SERP2	Q8N6R1	65 aa		5.08	□□□□□ -1.6
PSMC3-205	ENST00000528362		P0C880	135 aa		5.04	□□□□□ -1.6
PSMC3-205	ENST00000528362	C20orf197	Q8N268	126 aa		5.03	□□□□□ -1.6
PSMC3-205	ENST00000528362	SNURF	Q9Y675	71 aa		5.03	□□□□□ -1.6
PSMC3-205	ENST00000528362	ANAPC13	Q9BS18	74 aa		5.02	□□□□□ -1.61
PSMC3-205	ENST00000528362	COX7C	P15954	63 aa		5	□□□□□ -1.61
PSMC3-205	ENST00000528362	KRTAP20-1	Q3LI63	56 aa		4.99	□□□□□ -1.61
PSMC3-205	ENST00000528362		R4GN34	69 aa		4.99	□□□□□ -1.61
PSMC3-205	ENST00000528362	KRTAP4-8	Q9BYQ9	185 aa		4.97	□□□□□ -1.61
PSMC3-205	ENST00000528362		M0QZ58	72 aa		4.96	□□□□□ -1.62
PSMC3-205	ENST00000528362	MT1X	P80297	61 aa		4.96	□□□□□ -1.62
PSMC3-205	ENST00000528362	KMT2D	O14686	5537 aa		4.96	□□□□□ -1.62
PSMC3-205	ENST00000528362	MDN1	Q9NU22	5596 aa		4.95	□□□□□ -1.62
PSMC3-205	ENST00000528362	ACYP2	P14621	99 aa		4.95	□□□□□ -1.62
PSMC3-205	ENST00000528362	KRTAP5-9	P26371	169 aa		4.94	□□□□□ -1.62
PSMC3-205	ENST00000528362	PLAC4	Q8WY50	150 aa		4.93	□□□□□ -1.62
PSMC3-205	ENST00000528362	PRO2289	Q9P1D8	64 aa		4.92	□□□□□ -1.62
PSMC3-205	ENST00000528362	SPANXA2-OT1	Q8N9U9	137 aa		4.9	□□□□□ -1.63
PSMC3-205	ENST00000528362	LINC01554	Q52M75	96 aa		4.89	□□□□□ -1.63
PSMC3-205	ENST00000528362	SPTSSB	Q8NFR3	76 aa		4.88	□□□□□ -1.63
PSMC3-205	ENST00000528362	CHKB-CPT1B	H3BT56	60 aa		4.87	□□□□□ -1.63
PSMC3-205	ENST00000528362	CCDC179	H3BU77	68 aa		4.87	□□□□□ -1.63
PSMC3-205	ENST00000528362		H7BZZ5	65 aa		4.84	□□□□□ -1.63
PSMC3-205	ENST00000528362	CYSTM1	Q9H1C7	97 aa		4.84	□□□□□ -1.63
PSMC3-205	ENST00000528362	KRTAP12-2	P59991	146 aa		4.81	□□□□□ -1.64
PSMC3-205	ENST00000528362	KRTAP2-3	P0C7H8	128 aa		4.79	□□□□□ -1.64
PSMC3-205	ENST00000528362	KRTAP2-4	Q9BYR9	128 aa		4.79	□□□□□ -1.64
PSMC3-205	ENST00000528362	SPRR2F	Q96RM1	72 aa		4.78	□□□□□ -1.64
PSMC3-205	ENST00000528362	COA5	Q86WW8	74 aa		4.77	□□□□□ -1.65
PSMC3-205	ENST00000528362	ATP5E	P56381	51 aa	Predicted RBP	4.76	□□□□□ -1.65
PSMC3-205	ENST00000528362	KRTAP8-1	Q8IUC2	63 aa		4.76	□□□□□ -1.65
PSMC3-205	ENST00000528362	KRTAP4-8	A0A0G2JLE6	195 aa		4.73	□□□□□ -1.65
PSMC3-205	ENST00000528362	KRTAP10-7	P60409	375 aa	Predicted RBP	4.73	□□□□□ -1.65
PSMC3-205	ENST00000528362	TMEM258	P61165	79 aa		4.73	□□□□□ -1.65
PSMC3-205	ENST00000528362	KRTAP13-4	Q3LI77	160 aa		4.73	□□□□□ -1.65
PSMC3-205	ENST00000528362	LCE3B	Q5TA77	95 aa		4.71	□□□□□ -1.66
PSMC3-205	ENST00000528362	SPRR2E	P22531	72 aa		4.7	□□□□□ -1.66
PSMC3-205	ENST00000528362	SPRR2B	P35325	72 aa		4.7	□□□□□ -1.66
PSMC3-205	ENST00000528362	SPRR2A	P35326	72 aa		4.7	□□□□□ -1.66
PSMC3-205	ENST00000528362	KRTAP10-12	P60413	245 aa		4.7	□□□□□ -1.66
PSMC3-205	ENST00000528362	KRTAP4-12	Q9BQ66	201 aa		4.67	□□□□□ -1.66
PSMC3-205	ENST00000528362	PCP4	P48539	62 aa		4.66	□□□□□ -1.66
PSMC3-205	ENST00000528362	LCE1A	Q5T7P2	110 aa		4.66	□□□□□ -1.66
PSMC3-205	ENST00000528362	KRTAP9-9	Q9BYP9	154 aa		4.64	□□□□□ -1.67
PSMC3-205	ENST00000528362	KRTAP9-4	Q9BYQ2	154 aa		4.64	□□□□□ -1.67
PSMC3-205	ENST00000528362	SEC61G	P60059	68 aa		4.63	□□□□□ -1.67
PSMC3-205	ENST00000528362	KRTAP2-2	Q9BYT5	123 aa		4.63	□□□□□ -1.67
PSMC3-205	ENST00000528362	KRTAP2-1	Q9BYU5	128 aa		4.63	□□□□□ -1.67
PSMC3-205	ENST00000528362	SERP1	Q9Y6X1	66 aa		4.6	□□□□□ -1.67
PSMC3-205	ENST00000528362	CAMK2N1	Q7Z7J9	78 aa		4.59	□□□□□ -1.67
PSMC3-205	ENST00000528362		A0A0D9SG42	100 aa		4.56	□□□□□ -1.68
PSMC3-205	ENST00000528362	SPRR2D	P22532	72 aa		4.55	□□□□□ -1.68
PSMC3-205	ENST00000528362	SPATA8	Q6RVD6	105 aa		4.55	□□□□□ -1.68
PSMC3-205	ENST00000528362		A0A1B0GU69	56 aa		4.54	□□□□□ -1.68
PSMC3-205	ENST00000528362		A0A1B0GU33	70 aa		4.53	□□□□□ -1.68
PSMC3-205	ENST00000528362	PRR15L	Q9BU68	103 aa		4.52	□□□□□ -1.69
PSMC3-205	ENST00000528362	KRTAP12-1	P59990	96 aa		4.48	□□□□□ -1.69
PSMC3-205	ENST00000528362	SPINT4	Q6UDR6	99 aa		4.48	□□□□□ -1.69
PSMC3-205	ENST00000528362	KRTAP4-7	Q9BYR0	210 aa		4.46	□□□□□ -1.7
PSMC3-205	ENST00000528362	LINC01558	Q9Y6Z2	57 aa		4.46	□□□□□ -1.7
PSMC3-205	ENST00000528362	KRTAP19-7	Q3SYF9	63 aa		4.43	□□□□□ -1.7
PSMC3-205	ENST00000528362		V9GYY9	64 aa		4.43	□□□□□ -1.7
PSMC3-205	ENST00000528362	SMIM26	A0A096LP01	95 aa		4.41	□□□□□ -1.7
PSMC3-205	ENST00000528362	LCE1D	Q5T752	114 aa		4.41	□□□□□ -1.7
PSMC3-205	ENST00000528362		A8MU10	97 aa		4.4	□□□□□ -1.71
PSMC3-205	ENST00000528362	MT1E	P04732	61 aa		4.39	□□□□□ -1.71
PSMC3-205	ENST00000528362	RPS28	P62857	69 aa	Known RBP	4.38	□□□□□ -1.71
PSMC3-205	ENST00000528362	GPR98	Q8WXG9	6306 aa		4.38	□□□□□ -1.71
PSMC3-205	ENST00000528362		Q1T7F1	81 aa		4.37	□□□□□ -1.71
PSMC3-205	ENST00000528362	PSPHP1	O15172	72 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 79 ms