RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 Q5VV11 94 aa8.68□□□□□ -1.02
CAPN1-211ENST00000527739 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
CAPN1-211ENST00000527739 A0A087WVE0 104 aa8.66□□□□□ -1.02
CAPN1-211ENST00000527739 UQCRQO14949 82 aa8.66□□□□□ -1.02
CAPN1-211ENST00000527739 H0Y9P7 68 aa8.65□□□□□ -1.02
CAPN1-211ENST00000527739 KLKP1Q107X0 134 aa8.65□□□□□ -1.02
CAPN1-211ENST00000527739 SPRR2GQ9BYE4 73 aa8.64□□□□□ -1.03
CAPN1-211ENST00000527739 MUC12Q9UKN1 5478 aa8.63□□□□□ -1.03
CAPN1-211ENST00000527739 A6NN06 94 aa8.63□□□□□ -1.03
CAPN1-211ENST00000527739 NEBP20929 6669 aa8.63□□□□□ -1.03
CAPN1-211ENST00000527739 MT1BP07438 61 aa8.62□□□□□ -1.03
CAPN1-211ENST00000527739 ATOX1O00244 68 aa8.61□□□□□ -1.03
CAPN1-211ENST00000527739 KRTAP19-8Q3LI54 63 aa8.59□□□□□ -1.03
CAPN1-211ENST00000527739 ANAPC13Q9BS18 74 aa8.59□□□□□ -1.03
CAPN1-211ENST00000527739 NDUFC1O43677 76 aa8.56□□□□□ -1.04
CAPN1-211ENST00000527739 LINC00643Q86TS7 51 aa8.56□□□□□ -1.04
CAPN1-211ENST00000527739 IMUPQ9GZP8 106 aa8.54□□□□□ -1.04
CAPN1-211ENST00000527739 LINC00208Q96KT6 92 aa8.52□□□□□ -1.05
CAPN1-211ENST00000527739 CRIPTQ9P021 101 aa8.51□□□□□ -1.05
CAPN1-211ENST00000527739 SMIM20Q8N5G0 67 aa8.5□□□□□ -1.05
CAPN1-211ENST00000527739 MP68P56378 58 aa8.46□□□□□ -1.06
CAPN1-211ENST00000527739 A8MUN3 132 aa8.45□□□□□ -1.06
CAPN1-211ENST00000527739 KRTAP10-5P60370 271 aa8.44□□□□□ -1.06
CAPN1-211ENST00000527739 KRTAP20-1Q3LI63 56 aa8.43□□□□□ -1.06
CAPN1-211ENST00000527739 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
CAPN1-211ENST00000527739 ADM2Q7Z4H4 148 aa8.41□□□□□ -1.06
CAPN1-211ENST00000527739 H0YAA0 97 aa8.4□□□□□ -1.06
CAPN1-211ENST00000527739 OCR1Q9BZK8 76 aa8.4□□□□□ -1.06
CAPN1-211ENST00000527739 KRTAP5-9P26371 169 aa8.33□□□□□ -1.08
CAPN1-211ENST00000527739 RPS28P62857 69 aaKnown RBP8.33□□□□□ -1.08
CAPN1-211ENST00000527739 KMT2DO14686 5537 aa8.32□□□□□ -1.08
CAPN1-211ENST00000527739 MDN1Q9NU22 5596 aa8.31□□□□□ -1.08
CAPN1-211ENST00000527739 CCDC179H3BU77 68 aa8.31□□□□□ -1.08
CAPN1-211ENST00000527739 H3BPC8 53 aa8.27□□□□□ -1.09
CAPN1-211ENST00000527739 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
CAPN1-211ENST00000527739 R4GN34 69 aa8.2□□□□□ -1.1
CAPN1-211ENST00000527739 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
CAPN1-211ENST00000527739 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
CAPN1-211ENST00000527739 P0C880 135 aa8.17□□□□□ -1.1
CAPN1-211ENST00000527739 PRO2289Q9P1D8 64 aa8.16□□□□□ -1.1
CAPN1-211ENST00000527739 M0QZ58 72 aa8.14□□□□□ -1.11
CAPN1-211ENST00000527739 TMEM258P61165 79 aa8.13□□□□□ -1.11
CAPN1-211ENST00000527739 KRTAP2-3P0C7H8 128 aa8.09□□□□□ -1.11
CAPN1-211ENST00000527739 COX7CP15954 63 aa8.09□□□□□ -1.11
CAPN1-211ENST00000527739 KRTAP2-4Q9BYR9 128 aa8.09□□□□□ -1.11
CAPN1-211ENST00000527739 MT1XP80297 61 aa8.08□□□□□ -1.12
CAPN1-211ENST00000527739 LINC01554Q52M75 96 aa8.08□□□□□ -1.12
CAPN1-211ENST00000527739 PRO0628Q9UI54 55 aa8.06□□□□□ -1.12
CAPN1-211ENST00000527739 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
CAPN1-211ENST00000527739 ACYP2P14621 99 aa8.04□□□□□ -1.12
CAPN1-211ENST00000527739 TRAV7A0A075B6U4 112 aa8.03□□□□□ -1.12
CAPN1-211ENST00000527739 SPRR2FQ96RM1 72 aa8□□□□□ -1.13
CAPN1-211ENST00000527739 SPRR2EP22531 72 aa7.98□□□□□ -1.13
CAPN1-211ENST00000527739 SPRR2BP35325 72 aa7.98□□□□□ -1.13
CAPN1-211ENST00000527739 SPRR2AP35326 72 aa7.98□□□□□ -1.13
CAPN1-211ENST00000527739 SPTSSBQ8NFR3 76 aa7.97□□□□□ -1.13
CAPN1-211ENST00000527739 CHKB-CPT1BH3BT56 60 aa7.94□□□□□ -1.14
CAPN1-211ENST00000527739 SEC61GP60059 68 aa7.94□□□□□ -1.14
CAPN1-211ENST00000527739 V9GYY9 64 aa7.94□□□□□ -1.14
CAPN1-211ENST00000527739 SERP2Q8N6R1 65 aa7.93□□□□□ -1.14
CAPN1-211ENST00000527739 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
CAPN1-211ENST00000527739 SNURFQ9Y675 71 aa7.88□□□□□ -1.15
CAPN1-211ENST00000527739 SERP1Q9Y6X1 66 aa7.88□□□□□ -1.15
CAPN1-211ENST00000527739 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
CAPN1-211ENST00000527739 SMIM26A0A096LP01 95 aa7.83□□□□□ -1.16
CAPN1-211ENST00000527739 LCE1AQ5T7P2 110 aa7.83□□□□□ -1.16
CAPN1-211ENST00000527739 ATP5EP56381 51 aaPredicted RBP7.82□□□□□ -1.16
CAPN1-211ENST00000527739 KRTAP2-2Q9BYT5 123 aa7.81□□□□□ -1.16
CAPN1-211ENST00000527739 KRTAP2-1Q9BYU5 128 aa7.81□□□□□ -1.16
CAPN1-211ENST00000527739 KRTAP4-8A0A0G2JLE6 195 aa7.78□□□□□ -1.16
CAPN1-211ENST00000527739 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
CAPN1-211ENST00000527739 KRTAP10-7P60409 375 aaPredicted RBP7.74□□□□□ -1.17
CAPN1-211ENST00000527739 SPANXA2-OT1Q8N9U9 137 aa7.72□□□□□ -1.17
CAPN1-211ENST00000527739 SPRR2DP22532 72 aa7.71□□□□□ -1.18
CAPN1-211ENST00000527739 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
CAPN1-211ENST00000527739 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
CAPN1-211ENST00000527739 BRK1Q8WUW1 75 aa7.62□□□□□ -1.19
CAPN1-211ENST00000527739 H7BZZ5 65 aa7.6□□□□□ -1.19
CAPN1-211ENST00000527739 PMAIP1Q13794 54 aa7.6□□□□□ -1.19
CAPN1-211ENST00000527739 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
CAPN1-211ENST00000527739 CAMK2N1Q7Z7J9 78 aa7.57□□□□□ -1.2
CAPN1-211ENST00000527739 COA5Q86WW8 74 aa7.56□□□□□ -1.2
CAPN1-211ENST00000527739 LCE3BQ5TA77 95 aa7.54□□□□□ -1.2
CAPN1-211ENST00000527739 A0A0D9SG42 100 aa7.46□□□□□ -1.22
CAPN1-211ENST00000527739 Q1T7F1 81 aa7.39□□□□□ -1.23
CAPN1-211ENST00000527739 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
CAPN1-211ENST00000527739 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
CAPN1-211ENST00000527739 A0A1B0GU33 70 aa7.35□□□□□ -1.23
CAPN1-211ENST00000527739 KTN1-AS1Q86SY8 53 aa7.33□□□□□ -1.24
CAPN1-211ENST00000527739 GPR98Q8WXG9 6306 aa7.25□□□□□ -1.25
CAPN1-211ENST00000527739 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
CAPN1-211ENST00000527739 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.26
CAPN1-211ENST00000527739 A0A1B0GU69 56 aa7.2□□□□□ -1.26
CAPN1-211ENST00000527739 KRTAP4-9Q9BYQ8 210 aa7.18□□□□□ -1.26
CAPN1-211ENST00000527739 MT1EP04732 61 aa7.17□□□□□ -1.26
CAPN1-211ENST00000527739 LCE5AQ5TCM9 118 aa7.12□□□□□ -1.27
CAPN1-211ENST00000527739 KRTAP19-3Q7Z4W3 81 aa7.12□□□□□ -1.27
CAPN1-211ENST00000527739 DSTQ03001 7570 aaKnown RBP7.11□□□□□ -1.27
CAPN1-211ENST00000527739 A8MU10 97 aa7.09□□□□□ -1.27
CAPN1-211ENST00000527739 PSPHP1O15172 72 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms