RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 IMUPQ9GZP8 106 aa6.19□□□□□ -1.42
CAPN1-209ENST00000527469 NDUFC1O43677 76 aa6.18□□□□□ -1.42
CAPN1-209ENST00000527469 KLKP1Q107X0 134 aa6.18□□□□□ -1.42
CAPN1-209ENST00000527469 MT-ATP8P03928 68 aa6.16□□□□□ -1.42
CAPN1-209ENST00000527469 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
CAPN1-209ENST00000527469 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
CAPN1-209ENST00000527469 SMIM20Q8N5G0 67 aa6.13□□□□□ -1.43
CAPN1-209ENST00000527469 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
CAPN1-209ENST00000527469 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
CAPN1-209ENST00000527469 KRTAP19-6Q3LI70 58 aa6.05□□□□□ -1.44
CAPN1-209ENST00000527469 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
CAPN1-209ENST00000527469 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
CAPN1-209ENST00000527469 Q5VV11 94 aa6.03□□□□□ -1.44
CAPN1-209ENST00000527469 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
CAPN1-209ENST00000527469 H0YAA0 97 aa6.02□□□□□ -1.45
CAPN1-209ENST00000527469 SPRR2GQ9BYE4 73 aa6.02□□□□□ -1.45
CAPN1-209ENST00000527469 ADM2Q7Z4H4 148 aa6.01□□□□□ -1.45
CAPN1-209ENST00000527469 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
CAPN1-209ENST00000527469 ACYP2P14621 99 aa5.96□□□□□ -1.46
CAPN1-209ENST00000527469 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
CAPN1-209ENST00000527469 C20orf197Q8N268 126 aa5.94□□□□□ -1.46
CAPN1-209ENST00000527469 SNURFQ9Y675 71 aa5.94□□□□□ -1.46
CAPN1-209ENST00000527469 MT1BP07438 61 aa5.92□□□□□ -1.46
CAPN1-209ENST00000527469 SERP2Q8N6R1 65 aa5.92□□□□□ -1.46
CAPN1-209ENST00000527469 CHKB-CPT1BH3BT56 60 aa5.91□□□□□ -1.46
CAPN1-209ENST00000527469 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
CAPN1-209ENST00000527469 A6NN06 94 aa5.9□□□□□ -1.46
CAPN1-209ENST00000527469 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
CAPN1-209ENST00000527469 R4GN34 69 aa5.87□□□□□ -1.47
CAPN1-209ENST00000527469 P0C880 135 aa5.84□□□□□ -1.47
CAPN1-209ENST00000527469 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
CAPN1-209ENST00000527469 SYNE2Q8WXH0 6885 aaKnown RBP5.82□□□□□ -1.48
CAPN1-209ENST00000527469 M0QZ58 72 aa5.82□□□□□ -1.48
CAPN1-209ENST00000527469 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
CAPN1-209ENST00000527469 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
CAPN1-209ENST00000527469 KRTAP3-2Q9BYR7 98 aa5.77□□□□□ -1.49
CAPN1-209ENST00000527469 COX7CP15954 63 aa5.76□□□□□ -1.49
CAPN1-209ENST00000527469 LINC01554Q52M75 96 aa5.76□□□□□ -1.49
CAPN1-209ENST00000527469 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
CAPN1-209ENST00000527469 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
CAPN1-209ENST00000527469 COA5Q86WW8 74 aa5.68□□□□□ -1.5
CAPN1-209ENST00000527469 SVIPQ8NHG7 77 aa5.67□□□□□ -1.5
CAPN1-209ENST00000527469 ANAPC13Q9BS18 74 aa5.67□□□□□ -1.5
CAPN1-209ENST00000527469 H7BZZ5 65 aa5.62□□□□□ -1.51
CAPN1-209ENST00000527469 SEC61GP60059 68 aa5.62□□□□□ -1.51
CAPN1-209ENST00000527469 MT1XP80297 61 aa5.59□□□□□ -1.51
CAPN1-209ENST00000527469 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
CAPN1-209ENST00000527469 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
CAPN1-209ENST00000527469 NEBP20929 6669 aa5.53□□□□□ -1.52
CAPN1-209ENST00000527469 CCDC179H3BU77 68 aa5.5□□□□□ -1.53
CAPN1-209ENST00000527469 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
CAPN1-209ENST00000527469 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
CAPN1-209ENST00000527469 A0A1B0GU33 70 aa5.45□□□□□ -1.54
CAPN1-209ENST00000527469 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
CAPN1-209ENST00000527469 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
CAPN1-209ENST00000527469 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
CAPN1-209ENST00000527469 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
CAPN1-209ENST00000527469 A0A0D9SG42 100 aa5.43□□□□□ -1.54
CAPN1-209ENST00000527469 A0A1B0GU69 56 aa5.43□□□□□ -1.54
CAPN1-209ENST00000527469 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
CAPN1-209ENST00000527469 KMT2DO14686 5537 aa5.4□□□□□ -1.55
CAPN1-209ENST00000527469 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
CAPN1-209ENST00000527469 SPRR2FQ96RM1 72 aa5.39□□□□□ -1.55
CAPN1-209ENST00000527469 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
CAPN1-209ENST00000527469 SPINT4Q6UDR6 99 aa5.35□□□□□ -1.55
CAPN1-209ENST00000527469 PRR15LQ9BU68 103 aa5.34□□□□□ -1.55
CAPN1-209ENST00000527469 TMEM258P61165 79 aa5.33□□□□□ -1.56
CAPN1-209ENST00000527469 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
CAPN1-209ENST00000527469 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
CAPN1-209ENST00000527469 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
CAPN1-209ENST00000527469 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
CAPN1-209ENST00000527469 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
CAPN1-209ENST00000527469 SPRR2EP22531 72 aa5.28□□□□□ -1.56
CAPN1-209ENST00000527469 SPRR2BP35325 72 aa5.28□□□□□ -1.56
CAPN1-209ENST00000527469 SPRR2AP35326 72 aa5.28□□□□□ -1.56
CAPN1-209ENST00000527469 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
CAPN1-209ENST00000527469 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
CAPN1-209ENST00000527469 LINC01558Q9Y6Z2 57 aa5.22□□□□□ -1.57
CAPN1-209ENST00000527469 A8MU10 97 aa5.21□□□□□ -1.58
CAPN1-209ENST00000527469 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
CAPN1-209ENST00000527469 UQCR11O14957 56 aa5.12□□□□□ -1.59
CAPN1-209ENST00000527469 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
CAPN1-209ENST00000527469 PCP4P48539 62 aa5.12□□□□□ -1.59
CAPN1-209ENST00000527469 KRTAP2-4Q9BYR9 128 aa5.12□□□□□ -1.59
CAPN1-209ENST00000527469 SPRR2DP22532 72 aa5.1□□□□□ -1.59
CAPN1-209ENST00000527469 V9GYY9 64 aa5.06□□□□□ -1.6
CAPN1-209ENST00000527469 TNP1P09430 55 aa5.03□□□□□ -1.6
CAPN1-209ENST00000527469 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
CAPN1-209ENST00000527469 PSPHP1O15172 72 aa4.99□□□□□ -1.61
CAPN1-209ENST00000527469 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
CAPN1-209ENST00000527469 K7ERS5 55 aa4.98□□□□□ -1.61
CAPN1-209ENST00000527469 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
CAPN1-209ENST00000527469 Q1T7F1 81 aa4.97□□□□□ -1.61
CAPN1-209ENST00000527469 MT1EP04732 61 aa4.96□□□□□ -1.62
CAPN1-209ENST00000527469 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
CAPN1-209ENST00000527469 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.62
CAPN1-209ENST00000527469 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
CAPN1-209ENST00000527469 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
CAPN1-209ENST00000527469 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
CAPN1-209ENST00000527469 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms