RNA–Protein interactions for RNA: ENST00000526772.5

CTNND1-214, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-214ENST00000526772 RYR3Q15413 4870 aa2.67□□□□□ -1.98
CTNND1-214ENST00000526772 DNAH2Q9P225 4427 aa2.67□□□□□ -1.98
CTNND1-214ENST00000526772 CUBNO60494 3623 aa2.67□□□□□ -1.98
CTNND1-214ENST00000526772 SRRM2Q9UQ35 2752 aaKnown RBP2.66□□□□□ -1.98
CTNND1-214ENST00000526772 MT1HL1P0DM35 61 aa2.65□□□□□ -1.99
CTNND1-214ENST00000526772 KRTAP10-5P60370 271 aa2.64□□□□□ -1.99
CTNND1-214ENST00000526772 MEGF8Q7Z7M0 2845 aa2.64□□□□□ -1.99
CTNND1-214ENST00000526772 DNAH1Q9P2D7 4330 aa2.64□□□□□ -1.99
CTNND1-214ENST00000526772 LORP23490 312 aaPredicted RBP2.63□□□□□ -1.99
CTNND1-214ENST00000526772 TENM1Q9UKZ4 2725 aa2.62□□□□□ -1.99
CTNND1-214ENST00000526772 KMT2CQ8NEZ4 4911 aaKnown RBP2.62□□□□□ -1.99
CTNND1-214ENST00000526772 DNAH7Q8WXX0 4024 aa2.61□□□□□ -1.99
CTNND1-214ENST00000526772 VWFP04275 2813 aa2.61□□□□□ -1.99
CTNND1-214ENST00000526772 KRTAP19-4Q3LI73 84 aa2.61□□□□□ -1.99
CTNND1-214ENST00000526772 PKHD1L1Q86WI1 4243 aa2.61□□□□□ -1.99
CTNND1-214ENST00000526772 PRKDCP78527 4128 aaKnown RBP2.61□□□□□ -1.99
CTNND1-214ENST00000526772 TRRAPQ9Y4A5 3859 aa2.6□□□□□ -1.99
CTNND1-214ENST00000526772 DNAH11Q96DT5 4516 aa2.59□□□□□ -1.99
CTNND1-214ENST00000526772 PKD1L1Q8TDX9 2849 aa2.59□□□□□ -2
CTNND1-214ENST00000526772 FAT2Q9NYQ8 4349 aa2.59□□□□□ -2
CTNND1-214ENST00000526772 HERC2O95714 4834 aa2.57□□□□□ -2
CTNND1-214ENST00000526772 LYSTQ99698 3801 aa2.56□□□□□ -2
CTNND1-214ENST00000526772 SVEP1Q4LDE5 3571 aa2.56□□□□□ -2
CTNND1-214ENST00000526772 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
CTNND1-214ENST00000526772 RYR2Q92736 4967 aa2.55□□□□□ -2
CTNND1-214ENST00000526772 HECTD4Q9Y4D8 3996 aa2.55□□□□□ -2
CTNND1-214ENST00000526772 EPPK1P58107 5090 aaKnown RBP2.55□□□□□ -2
CTNND1-214ENST00000526772 VPS13DQ5THJ4 4388 aa2.54□□□□□ -2
CTNND1-214ENST00000526772 DNAH10Q8IVF4 4471 aa2.53□□□□□ -2
CTNND1-214ENST00000526772 PCLOQ9Y6V0 5065 aa2.53□□□□□ -2
CTNND1-214ENST00000526772 MT3P25713 68 aa2.53□□□□□ -2
CTNND1-214ENST00000526772 HYDINQ4G0P3 5121 aa2.52□□□□□ -2.01
CTNND1-214ENST00000526772 DNAH17Q9UFH2 4485 aa2.52□□□□□ -2.01
CTNND1-214ENST00000526772 FRAS1Q86XX4 4008 aa2.52□□□□□ -2.01
CTNND1-214ENST00000526772 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
CTNND1-214ENST00000526772 SACSQ9NZJ4 4579 aa2.5□□□□□ -2.01
CTNND1-214ENST00000526772 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
CTNND1-214ENST00000526772 KMT2AQ03164 3969 aa2.49□□□□□ -2.01
CTNND1-214ENST00000526772 PKHD1P08F94 4074 aa2.49□□□□□ -2.01
CTNND1-214ENST00000526772 CSMD3Q7Z407 3707 aa2.48□□□□□ -2.01
CTNND1-214ENST00000526772 DNAH8Q96JB1 4490 aa2.48□□□□□ -2.01
CTNND1-214ENST00000526772 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
CTNND1-214ENST00000526772 DNAH9Q9NYC9 4486 aa2.47□□□□□ -2.01
CTNND1-214ENST00000526772 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
CTNND1-214ENST00000526772 COL7A1Q02388 2944 aa2.43□□□□□ -2.02
CTNND1-214ENST00000526772 LCE2AQ5TA79 106 aaPredicted RBP2.43□□□□□ -2.02
CTNND1-214ENST00000526772 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
CTNND1-214ENST00000526772 TNXBP22105 4242 aa2.39□□□□□ -2.03
CTNND1-214ENST00000526772 RYR1P21817 5038 aa2.36□□□□□ -2.03
CTNND1-214ENST00000526772 PLECQ15149 4684 aaKnown RBP2.35□□□□□ -2.03
CTNND1-214ENST00000526772 KRTAP4-1Q9BYQ7 146 aa2.35□□□□□ -2.03
CTNND1-214ENST00000526772 KRTAP19-5Q3LI72 72 aa2.34□□□□□ -2.03
CTNND1-214ENST00000526772 DYNC1H1Q14204 4646 aaKnown RBP2.33□□□□□ -2.04
CTNND1-214ENST00000526772 KRTAP19-8Q3LI54 63 aa2.33□□□□□ -2.04
CTNND1-214ENST00000526772 DNAH5Q8TE73 4624 aa2.33□□□□□ -2.04
CTNND1-214ENST00000526772 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
CTNND1-214ENST00000526772 FAT3Q8TDW7 4589 aa2.32□□□□□ -2.04
CTNND1-214ENST00000526772 LCE2CQ5TA81 110 aa2.31□□□□□ -2.04
CTNND1-214ENST00000526772 MT2AP02795 61 aa2.31□□□□□ -2.04
CTNND1-214ENST00000526772 KIAA1109Q2LD37 5005 aa2.31□□□□□ -2.04
CTNND1-214ENST00000526772 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
CTNND1-214ENST00000526772 LRP1BQ9NZR2 4599 aa2.3□□□□□ -2.04
CTNND1-214ENST00000526772 STARD9Q9P2P6 4700 aa2.3□□□□□ -2.04
CTNND1-214ENST00000526772 LCE2BO14633 110 aa2.28□□□□□ -2.04
CTNND1-214ENST00000526772 MT1HP80294 61 aa2.27□□□□□ -2.05
CTNND1-214ENST00000526772 KRTAP19-1Q8IUB9 90 aa2.27□□□□□ -2.05
CTNND1-214ENST00000526772 KRTAP4-5Q9BYR2 181 aa2.27□□□□□ -2.05
CTNND1-214ENST00000526772 HSPG2P98160 4391 aa2.26□□□□□ -2.05
CTNND1-214ENST00000526772 FAT1Q14517 4588 aa2.25□□□□□ -2.05
CTNND1-214ENST00000526772 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
CTNND1-214ENST00000526772 PKD1P98161 4303 aa2.25□□□□□ -2.05
CTNND1-214ENST00000526772 MT1FP04733 61 aa2.25□□□□□ -2.05
CTNND1-214ENST00000526772 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
CTNND1-214ENST00000526772 MT1XP80297 61 aa2.22□□□□□ -2.05
CTNND1-214ENST00000526772 MUC17Q685J3 4493 aa2.21□□□□□ -2.06
CTNND1-214ENST00000526772 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
CTNND1-214ENST00000526772 KRTAP10-7P60409 375 aaPredicted RBP2.21□□□□□ -2.06
CTNND1-214ENST00000526772 HERC1Q15751 4861 aa2.2□□□□□ -2.06
CTNND1-214ENST00000526772 UBR4Q5T4S7 5183 aa2.19□□□□□ -2.06
CTNND1-214ENST00000526772 LRP1Q07954 4544 aaKnown RBP2.18□□□□□ -2.06
CTNND1-214ENST00000526772 KRTAP9-6A0A140TA67 174 aa2.18□□□□□ -2.06
CTNND1-214ENST00000526772 PRM1P04553 51 aa2.16□□□□□ -2.06
CTNND1-214ENST00000526772 MT1BP07438 61 aa2.15□□□□□ -2.06
CTNND1-214ENST00000526772 HMCN2Q8NDA2 5059 aa2.15□□□□□ -2.07
CTNND1-214ENST00000526772 LCE3BQ5TA77 95 aa2.13□□□□□ -2.07
CTNND1-214ENST00000526772 KRTAP9-2Q9BYQ4 174 aa2.12□□□□□ -2.07
CTNND1-214ENST00000526772 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
CTNND1-214ENST00000526772 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
CTNND1-214ENST00000526772 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
CTNND1-214ENST00000526772 MT1LQ93083 61 aa2.1□□□□□ -2.07
CTNND1-214ENST00000526772 FAT4Q6V0I7 4981 aa2.09□□□□□ -2.08
CTNND1-214ENST00000526772 MT1GP13640 62 aa2.07□□□□□ -2.08
CTNND1-214ENST00000526772 MT1EP04732 61 aa2.06□□□□□ -2.08
CTNND1-214ENST00000526772 KRTAP19-2Q3LHN2 52 aa2.06□□□□□ -2.08
CTNND1-214ENST00000526772 KRTAP9-8Q9BYQ0 159 aa2.06□□□□□ -2.08
CTNND1-214ENST00000526772 RNF213Q63HN8 5207 aa2.01□□□□□ -2.09
CTNND1-214ENST00000526772 LOC100996750A0A140TA64 210 aa2.01□□□□□ -2.09
CTNND1-214ENST00000526772 KRTAP9-3Q9BYQ3 159 aa2.01□□□□□ -2.09
CTNND1-214ENST00000526772 KRTAP4-6Q9BYQ5 205 aa2.01□□□□□ -2.09
CTNND1-214ENST00000526772 MUC2Q02817 5179 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 710.9 ms