RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 H1FX-AS1Q4G0G2 97 aa10.55□□□□□ -0.72
SMIM3-201ENST00000526627 XP32Q5T750 250 aa10.55□□□□□ -0.72
SMIM3-201ENST00000526627 RYR3Q15413 4870 aa10.54□□□□□ -0.72
SMIM3-201ENST00000526627 DMBT1Q9UGM3 2413 aaPredicted RBP10.52□□□□□ -0.73
SMIM3-201ENST00000526627 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
SMIM3-201ENST00000526627 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
SMIM3-201ENST00000526627 MYCBP2O75592 4640 aa10.47□□□□□ -0.73
SMIM3-201ENST00000526627 H3BS24 57 aa10.42□□□□□ -0.74
SMIM3-201ENST00000526627 KIAA1109Q2LD37 5005 aa10.4□□□□□ -0.75
SMIM3-201ENST00000526627 KRTAP10-6P60371 365 aaPredicted RBP10.35□□□□□ -0.75
SMIM3-201ENST00000526627 S4R3F8 94 aa10.3□□□□□ -0.76
SMIM3-201ENST00000526627 CSAG1Q6PB30 78 aa10.3□□□□□ -0.76
SMIM3-201ENST00000526627 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
SMIM3-201ENST00000526627 LINC01554Q52M75 96 aa10.25□□□□□ -0.77
SMIM3-201ENST00000526627 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
SMIM3-201ENST00000526627 LPAP08519 4548 aa10.19□□□□□ -0.78
SMIM3-201ENST00000526627 TPRXLQ17RH7 258 aa10.18□□□□□ -0.78
SMIM3-201ENST00000526627 EPPK1P58107 5090 aaKnown RBP10.15□□□□□ -0.78
SMIM3-201ENST00000526627 LRP2P98164 4655 aa10.15□□□□□ -0.78
SMIM3-201ENST00000526627 P0C880 135 aa10.13□□□□□ -0.79
SMIM3-201ENST00000526627 K7ERS5 55 aa10.12□□□□□ -0.79
SMIM3-201ENST00000526627 KRTAP4-5Q9BYR2 181 aa10.06□□□□□ -0.8
SMIM3-201ENST00000526627 A0A0D9SG42 100 aa10.05□□□□□ -0.8
SMIM3-201ENST00000526627 KRTAP25-1Q3LHN0 102 aa10.05□□□□□ -0.8
SMIM3-201ENST00000526627 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
SMIM3-201ENST00000526627 ROMO1P60602 79 aa9.95□□□□□ -0.82
SMIM3-201ENST00000526627 CRIPTQ9P021 101 aa9.93□□□□□ -0.82
SMIM3-201ENST00000526627 KRTAP12-2P59991 146 aa9.87□□□□□ -0.83
SMIM3-201ENST00000526627 KRTAP12-1P59990 96 aa9.81□□□□□ -0.84
SMIM3-201ENST00000526627 MUC17Q685J3 4493 aa9.79□□□□□ -0.84
SMIM3-201ENST00000526627 M0QZ58 72 aa9.77□□□□□ -0.85
SMIM3-201ENST00000526627 SEC61BP60468 96 aaKnown RBP9.76□□□□□ -0.85
SMIM3-201ENST00000526627 KRTAP4-1Q9BYQ7 146 aa9.74□□□□□ -0.85
SMIM3-201ENST00000526627 SPINT4Q6UDR6 99 aa9.71□□□□□ -0.85
SMIM3-201ENST00000526627 J3QL48 77 aa9.63□□□□□ -0.87
SMIM3-201ENST00000526627 C10orf95Q9H7T3 257 aa9.62□□□□□ -0.87
SMIM3-201ENST00000526627 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
SMIM3-201ENST00000526627 HERC2O95714 4834 aa9.59□□□□□ -0.87
SMIM3-201ENST00000526627 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
SMIM3-201ENST00000526627 R4GN34 69 aa9.53□□□□□ -0.88
SMIM3-201ENST00000526627 BIRC6Q9NR09 4857 aa9.35□□□□□ -0.91
SMIM3-201ENST00000526627 MUC2Q02817 5179 aa9.24□□□□□ -0.93
SMIM3-201ENST00000526627 FLGP20930 4061 aaPredicted RBP9.24□□□□□ -0.93
SMIM3-201ENST00000526627 KRTAP15-1Q3LI76 137 aa9.17□□□□□ -0.94
SMIM3-201ENST00000526627 HMCN2Q8NDA2 5059 aa9.1□□□□□ -0.95
SMIM3-201ENST00000526627 HERC1Q15751 4861 aa9.09□□□□□ -0.95
SMIM3-201ENST00000526627 PCLOQ9Y6V0 5065 aa9.04□□□□□ -0.96
SMIM3-201ENST00000526627 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
SMIM3-201ENST00000526627 CAMK2N1Q7Z7J9 78 aa9.02□□□□□ -0.97
SMIM3-201ENST00000526627 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
SMIM3-201ENST00000526627 NDUFAF8A1L188 74 aa8.94□□□□□ -0.98
SMIM3-201ENST00000526627 FAT4Q6V0I7 4981 aa8.84□□□□□ -0.99
SMIM3-201ENST00000526627 PP632Q6XCG6 107 aa8.83□□□□□ -1
SMIM3-201ENST00000526627 PLAC4Q8WY50 150 aa8.79□□□□□ -1
SMIM3-201ENST00000526627 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
SMIM3-201ENST00000526627 MT1HP80294 61 aa8.75□□□□□ -1.01
SMIM3-201ENST00000526627 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
SMIM3-201ENST00000526627 TNP1P09430 55 aa8.7□□□□□ -1.02
SMIM3-201ENST00000526627 RNF213Q63HN8 5207 aa8.69□□□□□ -1.02
SMIM3-201ENST00000526627 M0R2T5 61 aa8.66□□□□□ -1.02
SMIM3-201ENST00000526627 KRTAP23-1A1A580 65 aa8.62□□□□□ -1.03
SMIM3-201ENST00000526627 UBR4Q5T4S7 5183 aa8.61□□□□□ -1.03
SMIM3-201ENST00000526627 MT2AP02795 61 aa8.6□□□□□ -1.03
SMIM3-201ENST00000526627 MT1FP04733 61 aa8.6□□□□□ -1.03
SMIM3-201ENST00000526627 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
SMIM3-201ENST00000526627 KRTAP10-10P60014 251 aa8.52□□□□□ -1.05
SMIM3-201ENST00000526627 LUZP6Q538Z0 58 aa8.47□□□□□ -1.05
SMIM3-201ENST00000526627 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
SMIM3-201ENST00000526627 MT1BP07438 61 aa8.32□□□□□ -1.08
SMIM3-201ENST00000526627 LCE3AQ5TA76 89 aa8.3□□□□□ -1.08
SMIM3-201ENST00000526627 SPRR5A0A1B0GTR4 108 aa8.29□□□□□ -1.08
SMIM3-201ENST00000526627 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
SMIM3-201ENST00000526627 MT1XP80297 61 aa8.23□□□□□ -1.09
SMIM3-201ENST00000526627 KRTAP9-3Q9BYQ3 159 aa8.21□□□□□ -1.1
SMIM3-201ENST00000526627 KRTAP8-1Q8IUC2 63 aa8.11□□□□□ -1.11
SMIM3-201ENST00000526627 KRTAP10-12P60413 245 aa7.99□□□□□ -1.13
SMIM3-201ENST00000526627 KRTAP10-7P60409 375 aaPredicted RBP7.98□□□□□ -1.13
SMIM3-201ENST00000526627 LCE2BO14633 110 aa7.89□□□□□ -1.15
SMIM3-201ENST00000526627 KRTAP12-3P60328 96 aa7.89□□□□□ -1.15
SMIM3-201ENST00000526627 PRO2289Q9P1D8 64 aa7.84□□□□□ -1.15
SMIM3-201ENST00000526627 LCE2AQ5TA79 106 aaPredicted RBP7.8□□□□□ -1.16
SMIM3-201ENST00000526627 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
SMIM3-201ENST00000526627 USH2AO75445 5202 aa7.62□□□□□ -1.19
SMIM3-201ENST00000526627 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
SMIM3-201ENST00000526627 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
SMIM3-201ENST00000526627 KMT2DO14686 5537 aa7.47□□□□□ -1.21
SMIM3-201ENST00000526627 LCE3CQ5T5A8 94 aa7.44□□□□□ -1.22
SMIM3-201ENST00000526627 KRTAP19-7Q3SYF9 63 aa7.34□□□□□ -1.23
SMIM3-201ENST00000526627 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
SMIM3-201ENST00000526627 KRTAP9-6A8MVA2 160 aa7.21□□□□□ -1.26
SMIM3-201ENST00000526627 INE1O15225 51 aa7.17□□□□□ -1.26
SMIM3-201ENST00000526627 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.27
SMIM3-201ENST00000526627 MT1EP04732 61 aa7.12□□□□□ -1.27
SMIM3-201ENST00000526627 MT1LQ93083 61 aa7.11□□□□□ -1.27
SMIM3-201ENST00000526627 KRTAP19-6Q3LI70 58 aa7.1□□□□□ -1.27
SMIM3-201ENST00000526627 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
SMIM3-201ENST00000526627 FSIP2Q5CZC0 6907 aa7.04□□□□□ -1.28
SMIM3-201ENST00000526627 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
SMIM3-201ENST00000526627 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
SMIM3-201ENST00000526627 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms