RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
CCDC90B-203ENST00000525503 H0YAA0 97 aa8.52□□□□□ -1.05
CCDC90B-203ENST00000525503 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
CCDC90B-203ENST00000525503 S4R3F8 94 aa8.43□□□□□ -1.06
CCDC90B-203ENST00000525503 KRTAP3-3Q9BYR6 98 aa8.42□□□□□ -1.06
CCDC90B-203ENST00000525503 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
CCDC90B-203ENST00000525503 PRAC1Q96KF2 57 aa8.4□□□□□ -1.06
CCDC90B-203ENST00000525503 MYCBP2O75592 4640 aa8.4□□□□□ -1.07
CCDC90B-203ENST00000525503 LINC01554Q52M75 96 aa8.39□□□□□ -1.07
CCDC90B-203ENST00000525503 KIAA1109Q2LD37 5005 aa8.39□□□□□ -1.07
CCDC90B-203ENST00000525503 ADM2Q7Z4H4 148 aa8.39□□□□□ -1.07
CCDC90B-203ENST00000525503 EPPK1P58107 5090 aaKnown RBP8.36□□□□□ -1.07
CCDC90B-203ENST00000525503 K7ERS5 55 aa8.31□□□□□ -1.08
CCDC90B-203ENST00000525503 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
CCDC90B-203ENST00000525503 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
CCDC90B-203ENST00000525503 H3BS24 57 aa8.21□□□□□ -1.09
CCDC90B-203ENST00000525503 CSAG1Q6PB30 78 aa8.21□□□□□ -1.09
CCDC90B-203ENST00000525503 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
CCDC90B-203ENST00000525503 KRTAP13-4Q3LI77 160 aa8.17□□□□□ -1.1
CCDC90B-203ENST00000525503 P0C880 135 aa8.16□□□□□ -1.1
CCDC90B-203ENST00000525503 LRP2P98164 4655 aa8.12□□□□□ -1.11
CCDC90B-203ENST00000525503 BIRC6Q9NR09 4857 aa8.12□□□□□ -1.11
CCDC90B-203ENST00000525503 A0A0D9SG42 100 aa8.11□□□□□ -1.11
CCDC90B-203ENST00000525503 SEC61BP60468 96 aaKnown RBP8.11□□□□□ -1.11
CCDC90B-203ENST00000525503 LPAP08519 4548 aa8.1□□□□□ -1.11
CCDC90B-203ENST00000525503 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
CCDC90B-203ENST00000525503 J3QL48 77 aa8.05□□□□□ -1.12
CCDC90B-203ENST00000525503 ROMO1P60602 79 aa8.05□□□□□ -1.12
CCDC90B-203ENST00000525503 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
CCDC90B-203ENST00000525503 M0QZ58 72 aa8□□□□□ -1.13
CCDC90B-203ENST00000525503 HERC2O95714 4834 aa7.95□□□□□ -1.14
CCDC90B-203ENST00000525503 KRTAP12-2P59991 146 aa7.91□□□□□ -1.14
CCDC90B-203ENST00000525503 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
CCDC90B-203ENST00000525503 MUC17Q685J3 4493 aa7.89□□□□□ -1.15
CCDC90B-203ENST00000525503 SPINT4Q6UDR6 99 aa7.88□□□□□ -1.15
CCDC90B-203ENST00000525503 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
CCDC90B-203ENST00000525503 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
CCDC90B-203ENST00000525503 R4GN34 69 aa7.8□□□□□ -1.16
CCDC90B-203ENST00000525503 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
CCDC90B-203ENST00000525503 PCLOQ9Y6V0 5065 aa7.69□□□□□ -1.18
CCDC90B-203ENST00000525503 C10orf95Q9H7T3 257 aa7.65□□□□□ -1.18
CCDC90B-203ENST00000525503 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
CCDC90B-203ENST00000525503 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
CCDC90B-203ENST00000525503 HERC1Q15751 4861 aa7.48□□□□□ -1.21
CCDC90B-203ENST00000525503 HMCN2Q8NDA2 5059 aa7.43□□□□□ -1.22
CCDC90B-203ENST00000525503 MUC2Q02817 5179 aa7.41□□□□□ -1.22
CCDC90B-203ENST00000525503 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
CCDC90B-203ENST00000525503 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
CCDC90B-203ENST00000525503 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
CCDC90B-203ENST00000525503 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
CCDC90B-203ENST00000525503 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
CCDC90B-203ENST00000525503 M0R2T5 61 aa7.19□□□□□ -1.26
CCDC90B-203ENST00000525503 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
CCDC90B-203ENST00000525503 MT1HP80294 61 aa7.16□□□□□ -1.26
CCDC90B-203ENST00000525503 LCE2DQ5TA82 110 aaPredicted RBP7.16□□□□□ -1.26
CCDC90B-203ENST00000525503 TNP1P09430 55 aa7.11□□□□□ -1.27
CCDC90B-203ENST00000525503 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
CCDC90B-203ENST00000525503 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
CCDC90B-203ENST00000525503 RNF213Q63HN8 5207 aa7.08□□□□□ -1.28
CCDC90B-203ENST00000525503 UBR4Q5T4S7 5183 aa7.08□□□□□ -1.28
CCDC90B-203ENST00000525503 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
CCDC90B-203ENST00000525503 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
CCDC90B-203ENST00000525503 MT2AP02795 61 aa7.02□□□□□ -1.29
CCDC90B-203ENST00000525503 KRTAP10-10P60014 251 aa7.01□□□□□ -1.29
CCDC90B-203ENST00000525503 MT1FP04733 61 aa6.99□□□□□ -1.29
CCDC90B-203ENST00000525503 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
CCDC90B-203ENST00000525503 A0A0A0MQY5 61 aa6.9□□□□□ -1.3
CCDC90B-203ENST00000525503 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
CCDC90B-203ENST00000525503 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
CCDC90B-203ENST00000525503 KRTAP4-6Q9BYQ5 205 aa6.82□□□□□ -1.32
CCDC90B-203ENST00000525503 LUZP6Q538Z0 58 aa6.8□□□□□ -1.32
CCDC90B-203ENST00000525503 MT1BP07438 61 aa6.74□□□□□ -1.33
CCDC90B-203ENST00000525503 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
CCDC90B-203ENST00000525503 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
CCDC90B-203ENST00000525503 KRTAP10-5P60370 271 aa6.68□□□□□ -1.34
CCDC90B-203ENST00000525503 MT1XP80297 61 aa6.66□□□□□ -1.34
CCDC90B-203ENST00000525503 SPRR5A0A1B0GTR4 108 aa6.63□□□□□ -1.35
CCDC90B-203ENST00000525503 KRTAP8-1Q8IUC2 63 aa6.58□□□□□ -1.36
CCDC90B-203ENST00000525503 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
CCDC90B-203ENST00000525503 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
CCDC90B-203ENST00000525503 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
CCDC90B-203ENST00000525503 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
CCDC90B-203ENST00000525503 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
CCDC90B-203ENST00000525503 LCE2BO14633 110 aa6.41□□□□□ -1.38
CCDC90B-203ENST00000525503 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
CCDC90B-203ENST00000525503 USH2AO75445 5202 aa6.08□□□□□ -1.44
CCDC90B-203ENST00000525503 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
CCDC90B-203ENST00000525503 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
CCDC90B-203ENST00000525503 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
CCDC90B-203ENST00000525503 INE1O15225 51 aa5.98□□□□□ -1.45
CCDC90B-203ENST00000525503 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
CCDC90B-203ENST00000525503 KMT2DO14686 5537 aa5.91□□□□□ -1.46
CCDC90B-203ENST00000525503 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
CCDC90B-203ENST00000525503 SSPOA2VEC9 5147 aa5.89□□□□□ -1.47
CCDC90B-203ENST00000525503 KRTAP19-6Q3LI70 58 aa5.87□□□□□ -1.47
CCDC90B-203ENST00000525503 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
CCDC90B-203ENST00000525503 MT1EP04732 61 aa5.8□□□□□ -1.48
CCDC90B-203ENST00000525503 MT1LQ93083 61 aa5.77□□□□□ -1.49
CCDC90B-203ENST00000525503 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
CCDC90B-203ENST00000525503 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms