RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
CLN8-207ENST00000524258 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
CLN8-207ENST00000524258 H3BPC8 53 aa5.47□□□□□ -1.53
CLN8-207ENST00000524258 SCGB1A1P11684 91 aa5.45□□□□□ -1.54
CLN8-207ENST00000524258 A8MUN3 132 aa5.44□□□□□ -1.54
CLN8-207ENST00000524258 FAM236AA0A1B0GUQ0 79 aa5.42□□□□□ -1.54
CLN8-207ENST00000524258 FAM236BA0A1B0GV22 79 aa5.42□□□□□ -1.54
CLN8-207ENST00000524258 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
CLN8-207ENST00000524258 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
CLN8-207ENST00000524258 SPRR2GQ9BYE4 73 aa5.4□□□□□ -1.54
CLN8-207ENST00000524258 DMAC1Q96GE9 116 aa5.38□□□□□ -1.55
CLN8-207ENST00000524258 H0YAA0 97 aa5.37□□□□□ -1.55
CLN8-207ENST00000524258 NDUFC1O43677 76 aa5.37□□□□□ -1.55
CLN8-207ENST00000524258 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
CLN8-207ENST00000524258 SMIM20Q8N5G0 67 aa5.37□□□□□ -1.55
CLN8-207ENST00000524258 MT1BP07438 61 aa5.36□□□□□ -1.55
CLN8-207ENST00000524258 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
CLN8-207ENST00000524258 CRIPTQ9P021 101 aa5.29□□□□□ -1.56
CLN8-207ENST00000524258 ADM2Q7Z4H4 148 aa5.27□□□□□ -1.57
CLN8-207ENST00000524258 SERP2Q8N6R1 65 aa5.27□□□□□ -1.57
CLN8-207ENST00000524258 SNURFQ9Y675 71 aa5.27□□□□□ -1.57
CLN8-207ENST00000524258 Q5VV11 94 aa5.25□□□□□ -1.57
CLN8-207ENST00000524258 P0C880 135 aa5.23□□□□□ -1.57
CLN8-207ENST00000524258 ACYP2P14621 99 aa5.22□□□□□ -1.57
CLN8-207ENST00000524258 C20orf197Q8N268 126 aa5.22□□□□□ -1.57
CLN8-207ENST00000524258 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
CLN8-207ENST00000524258 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
CLN8-207ENST00000524258 MACF1Q9UPN3 7388 aaKnown RBP5.18□□□□□ -1.58
CLN8-207ENST00000524258 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
CLN8-207ENST00000524258 COX7CP15954 63 aa5.15□□□□□ -1.59
CLN8-207ENST00000524258 A6NN06 94 aa5.13□□□□□ -1.59
CLN8-207ENST00000524258 CYSTM1Q9H1C7 97 aa5.12□□□□□ -1.59
CLN8-207ENST00000524258 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
CLN8-207ENST00000524258 SPTSSBQ8NFR3 76 aa5.08□□□□□ -1.6
CLN8-207ENST00000524258 R4GN34 69 aa5.08□□□□□ -1.6
CLN8-207ENST00000524258 H7BZZ5 65 aa5.07□□□□□ -1.6
CLN8-207ENST00000524258 M0QZ58 72 aa5.07□□□□□ -1.6
CLN8-207ENST00000524258 CHKB-CPT1BH3BT56 60 aa5.06□□□□□ -1.6
CLN8-207ENST00000524258 MT1XP80297 61 aa5.05□□□□□ -1.6
CLN8-207ENST00000524258 KRTAP6-3Q3LI67 103 aa5.04□□□□□ -1.6
CLN8-207ENST00000524258 COA5Q86WW8 74 aa5.03□□□□□ -1.6
CLN8-207ENST00000524258 PLAC4Q8WY50 150 aa4.98□□□□□ -1.61
CLN8-207ENST00000524258 ANAPC13Q9BS18 74 aa4.98□□□□□ -1.61
CLN8-207ENST00000524258 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
CLN8-207ENST00000524258 LINC01554Q52M75 96 aa4.96□□□□□ -1.62
CLN8-207ENST00000524258 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
CLN8-207ENST00000524258 PRO2289Q9P1D8 64 aa4.92□□□□□ -1.62
CLN8-207ENST00000524258 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
CLN8-207ENST00000524258 KMT2DO14686 5537 aa4.88□□□□□ -1.63
CLN8-207ENST00000524258 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
CLN8-207ENST00000524258 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
CLN8-207ENST00000524258 NEBP20929 6669 aa4.82□□□□□ -1.64
CLN8-207ENST00000524258 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
CLN8-207ENST00000524258 SERP1Q9Y6X1 66 aa4.8□□□□□ -1.64
CLN8-207ENST00000524258 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
CLN8-207ENST00000524258 SEC61GP60059 68 aa4.79□□□□□ -1.64
CLN8-207ENST00000524258 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
CLN8-207ENST00000524258 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
CLN8-207ENST00000524258 A0A1B0GU33 70 aa4.78□□□□□ -1.64
CLN8-207ENST00000524258 ATP5EP56381 51 aaPredicted RBP4.78□□□□□ -1.64
CLN8-207ENST00000524258 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
CLN8-207ENST00000524258 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
CLN8-207ENST00000524258 A0A0D9SG42 100 aa4.72□□□□□ -1.65
CLN8-207ENST00000524258 TMEM258P61165 79 aa4.72□□□□□ -1.65
CLN8-207ENST00000524258 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
CLN8-207ENST00000524258 A0A1B0GU69 56 aa4.71□□□□□ -1.66
CLN8-207ENST00000524258 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
CLN8-207ENST00000524258 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
CLN8-207ENST00000524258 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
CLN8-207ENST00000524258 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
CLN8-207ENST00000524258 CAMK2N1Q7Z7J9 78 aa4.66□□□□□ -1.66
CLN8-207ENST00000524258 A8MU10 97 aa4.64□□□□□ -1.67
CLN8-207ENST00000524258 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
CLN8-207ENST00000524258 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
CLN8-207ENST00000524258 SMIM26A0A096LP01 95 aa4.61□□□□□ -1.67
CLN8-207ENST00000524258 SPRR2EP22531 72 aa4.6□□□□□ -1.67
CLN8-207ENST00000524258 SPRR2BP35325 72 aa4.6□□□□□ -1.67
CLN8-207ENST00000524258 SPRR2AP35326 72 aa4.6□□□□□ -1.67
CLN8-207ENST00000524258 PRR15LQ9BU68 103 aa4.57□□□□□ -1.68
CLN8-207ENST00000524258 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
CLN8-207ENST00000524258 KRTAP19-7Q3SYF9 63 aa4.53□□□□□ -1.68
CLN8-207ENST00000524258 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
CLN8-207ENST00000524258 PCP4P48539 62 aa4.52□□□□□ -1.69
CLN8-207ENST00000524258 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
CLN8-207ENST00000524258 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
CLN8-207ENST00000524258 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
CLN8-207ENST00000524258 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
CLN8-207ENST00000524258 UQCR11O14957 56 aa4.48□□□□□ -1.69
CLN8-207ENST00000524258 MT1EP04732 61 aa4.46□□□□□ -1.7
CLN8-207ENST00000524258 Q1T7F1 81 aa4.45□□□□□ -1.7
CLN8-207ENST00000524258 SPRR2DP22532 72 aa4.44□□□□□ -1.7
CLN8-207ENST00000524258 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
CLN8-207ENST00000524258 V9GYY9 64 aa4.4□□□□□ -1.71
CLN8-207ENST00000524258 PSPHP1O15172 72 aa4.39□□□□□ -1.71
CLN8-207ENST00000524258 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
CLN8-207ENST00000524258 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
CLN8-207ENST00000524258 TNP1P09430 55 aa4.37□□□□□ -1.71
CLN8-207ENST00000524258 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
CLN8-207ENST00000524258 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
CLN8-207ENST00000524258 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms