RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
SPIDR-224ENST00000524126 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
SPIDR-224ENST00000524126 EPPK1P58107 5090 aaKnown RBP5.47□□□□□ -1.53
SPIDR-224ENST00000524126 A0A0D9SG42 100 aa5.46□□□□□ -1.54
SPIDR-224ENST00000524126 FAT1Q14517 4588 aa5.45□□□□□ -1.54
SPIDR-224ENST00000524126 RPL37P61927 97 aaKnown RBP5.42□□□□□ -1.54
SPIDR-224ENST00000524126 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
SPIDR-224ENST00000524126 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
SPIDR-224ENST00000524126 SMR3BP02814 79 aaPredicted RBP5.4□□□□□ -1.54
SPIDR-224ENST00000524126 A0A1B0GVY2 172 aa5.37□□□□□ -1.55
SPIDR-224ENST00000524126 C9orf92A6NGG3 77 aa5.35□□□□□ -1.55
SPIDR-224ENST00000524126 KRTAP1-4P0C5Y4 121 aa5.34□□□□□ -1.55
SPIDR-224ENST00000524126 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
SPIDR-224ENST00000524126 KIAA1109Q2LD37 5005 aa5.31□□□□□ -1.56
SPIDR-224ENST00000524126 HERC2O95714 4834 aa5.3□□□□□ -1.56
SPIDR-224ENST00000524126 HSPG2P98160 4391 aa5.29□□□□□ -1.56
SPIDR-224ENST00000524126 PCLOQ9Y6V0 5065 aa5.28□□□□□ -1.56
SPIDR-224ENST00000524126 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
SPIDR-224ENST00000524126 S4R3F8 94 aa5.27□□□□□ -1.57
SPIDR-224ENST00000524126 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
SPIDR-224ENST00000524126 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
SPIDR-224ENST00000524126 KRTAP3-2Q9BYR7 98 aa5.25□□□□□ -1.57
SPIDR-224ENST00000524126 RYR1P21817 5038 aa5.24□□□□□ -1.57
SPIDR-224ENST00000524126 PKHD1L1Q86WI1 4243 aa5.23□□□□□ -1.57
SPIDR-224ENST00000524126 KRTAP10-4P60372 401 aaPredicted RBP5.23□□□□□ -1.57
SPIDR-224ENST00000524126 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
SPIDR-224ENST00000524126 MYCBP2O75592 4640 aa5.19□□□□□ -1.58
SPIDR-224ENST00000524126 XP32Q5T750 250 aa5.17□□□□□ -1.58
SPIDR-224ENST00000524126 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
SPIDR-224ENST00000524126 KRTAP12-1P59990 96 aa5.15□□□□□ -1.59
SPIDR-224ENST00000524126 TNXBP22105 4242 aa5.12□□□□□ -1.59
SPIDR-224ENST00000524126 Q5VSD8 79 aa5.12□□□□□ -1.59
SPIDR-224ENST00000524126 FAT3Q8TDW7 4589 aa5.08□□□□□ -1.6
SPIDR-224ENST00000524126 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
SPIDR-224ENST00000524126 SEC61BP60468 96 aaKnown RBP5.06□□□□□ -1.6
SPIDR-224ENST00000524126 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
SPIDR-224ENST00000524126 KRTAP10-8P60410 259 aa5.05□□□□□ -1.6
SPIDR-224ENST00000524126 ABCA13Q86UQ4 5058 aa5.04□□□□□ -1.6
SPIDR-224ENST00000524126 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
SPIDR-224ENST00000524126 LPAP08519 4548 aa4.95□□□□□ -1.62
SPIDR-224ENST00000524126 UBR4Q5T4S7 5183 aa4.91□□□□□ -1.62
SPIDR-224ENST00000524126 M0QZ58 72 aa4.88□□□□□ -1.63
SPIDR-224ENST00000524126 LRP2P98164 4655 aa4.87□□□□□ -1.63
SPIDR-224ENST00000524126 HERC1Q15751 4861 aa4.86□□□□□ -1.63
SPIDR-224ENST00000524126 R4GN34 69 aa4.75□□□□□ -1.65
SPIDR-224ENST00000524126 MUC2Q02817 5179 aa4.73□□□□□ -1.65
SPIDR-224ENST00000524126 J3QL48 77 aa4.73□□□□□ -1.65
SPIDR-224ENST00000524126 LORP23490 312 aaPredicted RBP4.71□□□□□ -1.66
SPIDR-224ENST00000524126 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
SPIDR-224ENST00000524126 PP632Q6XCG6 107 aa4.65□□□□□ -1.66
SPIDR-224ENST00000524126 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
SPIDR-224ENST00000524126 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
SPIDR-224ENST00000524126 KRTAP4-1Q9BYQ7 146 aa4.59□□□□□ -1.67
SPIDR-224ENST00000524126 MUC17Q685J3 4493 aa4.59□□□□□ -1.68
SPIDR-224ENST00000524126 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
SPIDR-224ENST00000524126 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
SPIDR-224ENST00000524126 PRO2289Q9P1D8 64 aa4.57□□□□□ -1.68
SPIDR-224ENST00000524126 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
SPIDR-224ENST00000524126 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
SPIDR-224ENST00000524126 TNP1P09430 55 aa4.42□□□□□ -1.7
SPIDR-224ENST00000524126 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.71
SPIDR-224ENST00000524126 INE1O15225 51 aa4.36□□□□□ -1.71
SPIDR-224ENST00000524126 FLGP20930 4061 aaPredicted RBP4.35□□□□□ -1.71
SPIDR-224ENST00000524126 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
SPIDR-224ENST00000524126 LCE2CQ5TA81 110 aa4.27□□□□□ -1.73
SPIDR-224ENST00000524126 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
SPIDR-224ENST00000524126 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
SPIDR-224ENST00000524126 MT1HP80294 61 aa4.17□□□□□ -1.74
SPIDR-224ENST00000524126 M0R2T5 61 aa4.14□□□□□ -1.75
SPIDR-224ENST00000524126 LCE2AQ5TA79 106 aaPredicted RBP4.11□□□□□ -1.75
SPIDR-224ENST00000524126 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
SPIDR-224ENST00000524126 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
SPIDR-224ENST00000524126 MT1FP04733 61 aa4.04□□□□□ -1.76
SPIDR-224ENST00000524126 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
SPIDR-224ENST00000524126 MT2AP02795 61 aa4.02□□□□□ -1.77
SPIDR-224ENST00000524126 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
SPIDR-224ENST00000524126 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
SPIDR-224ENST00000524126 USH2AO75445 5202 aa3.98□□□□□ -1.77
SPIDR-224ENST00000524126 KRTAP10-10P60014 251 aa3.98□□□□□ -1.77
SPIDR-224ENST00000524126 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
SPIDR-224ENST00000524126 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.77
SPIDR-224ENST00000524126 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
SPIDR-224ENST00000524126 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
SPIDR-224ENST00000524126 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
SPIDR-224ENST00000524126 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
SPIDR-224ENST00000524126 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
SPIDR-224ENST00000524126 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
SPIDR-224ENST00000524126 LCE2BO14633 110 aa3.81□□□□□ -1.8
SPIDR-224ENST00000524126 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
SPIDR-224ENST00000524126 MT1BP07438 61 aa3.81□□□□□ -1.8
SPIDR-224ENST00000524126 MT1XP80297 61 aa3.77□□□□□ -1.81
SPIDR-224ENST00000524126 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
SPIDR-224ENST00000524126 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
SPIDR-224ENST00000524126 KMT2DO14686 5537 aa3.74□□□□□ -1.81
SPIDR-224ENST00000524126 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
SPIDR-224ENST00000524126 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
SPIDR-224ENST00000524126 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
SPIDR-224ENST00000524126 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
SPIDR-224ENST00000524126 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
SPIDR-224ENST00000524126 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms