RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 KRTAP10-4P60372 401 aaPredicted RBP4.31□□□□□ -1.72
TNFRSF10B-208ENST00000523752 CSAG1Q6PB30 78 aa4.31□□□□□ -1.72
TNFRSF10B-208ENST00000523752 A0A1B0GU33 70 aa4.3□□□□□ -1.72
TNFRSF10B-208ENST00000523752 A8MUU9 505 aa4.3□□□□□ -1.72
TNFRSF10B-208ENST00000523752 C20orf166-AS1Q96NR2 134 aa4.3□□□□□ -1.72
TNFRSF10B-208ENST00000523752 CRIPTQ9P021 101 aa4.29□□□□□ -1.72
TNFRSF10B-208ENST00000523752 LRP1Q07954 4544 aaKnown RBP4.29□□□□□ -1.72
TNFRSF10B-208ENST00000523752 A0A0D9SG42 100 aa4.29□□□□□ -1.72
TNFRSF10B-208ENST00000523752 H0YAA0 97 aa4.28□□□□□ -1.72
TNFRSF10B-208ENST00000523752 A0A1B0GVY2 172 aa4.27□□□□□ -1.73
TNFRSF10B-208ENST00000523752 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
TNFRSF10B-208ENST00000523752 KRTAP4-5Q9BYR2 181 aa4.26□□□□□ -1.73
TNFRSF10B-208ENST00000523752 HSPG2P98160 4391 aa4.25□□□□□ -1.73
TNFRSF10B-208ENST00000523752 FAT3Q8TDW7 4589 aa4.24□□□□□ -1.73
TNFRSF10B-208ENST00000523752 HERC1Q15751 4861 aa4.24□□□□□ -1.73
TNFRSF10B-208ENST00000523752 TNXBP22105 4242 aa4.23□□□□□ -1.73
TNFRSF10B-208ENST00000523752 MYCBP2O75592 4640 aa4.23□□□□□ -1.73
TNFRSF10B-208ENST00000523752 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.74
TNFRSF10B-208ENST00000523752 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
TNFRSF10B-208ENST00000523752 Q5VSD8 79 aa4.19□□□□□ -1.74
TNFRSF10B-208ENST00000523752 J3QL48 77 aa4.18□□□□□ -1.74
TNFRSF10B-208ENST00000523752 P0C880 135 aa4.17□□□□□ -1.74
TNFRSF10B-208ENST00000523752 KRTAP25-1Q3LHN0 102 aa4.15□□□□□ -1.75
TNFRSF10B-208ENST00000523752 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.75
TNFRSF10B-208ENST00000523752 KRTAP10-8P60410 259 aa4.13□□□□□ -1.75
TNFRSF10B-208ENST00000523752 KRTAP3-3Q9BYR6 98 aa4.13□□□□□ -1.75
TNFRSF10B-208ENST00000523752 S4R3F8 94 aa4.13□□□□□ -1.75
TNFRSF10B-208ENST00000523752 LPAP08519 4548 aa4.13□□□□□ -1.75
TNFRSF10B-208ENST00000523752 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
TNFRSF10B-208ENST00000523752 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
TNFRSF10B-208ENST00000523752 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
TNFRSF10B-208ENST00000523752 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
TNFRSF10B-208ENST00000523752 RPL37P61927 97 aaKnown RBP4.1□□□□□ -1.75
TNFRSF10B-208ENST00000523752 XP32Q5T750 250 aa4.09□□□□□ -1.75
TNFRSF10B-208ENST00000523752 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
TNFRSF10B-208ENST00000523752 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
TNFRSF10B-208ENST00000523752 LRP2P98164 4655 aa4.06□□□□□ -1.76
TNFRSF10B-208ENST00000523752 MT1HL1P0DM35 61 aa4□□□□□ -1.77
TNFRSF10B-208ENST00000523752 C10orf95Q9H7T3 257 aa4□□□□□ -1.77
TNFRSF10B-208ENST00000523752 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
TNFRSF10B-208ENST00000523752 M0QZ58 72 aa3.96□□□□□ -1.78
TNFRSF10B-208ENST00000523752 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
TNFRSF10B-208ENST00000523752 R4GN34 69 aa3.95□□□□□ -1.78
TNFRSF10B-208ENST00000523752 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
TNFRSF10B-208ENST00000523752 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
TNFRSF10B-208ENST00000523752 KRTAP12-1P59990 96 aa3.9□□□□□ -1.78
TNFRSF10B-208ENST00000523752 CAMK2N1Q7Z7J9 78 aa3.85□□□□□ -1.79
TNFRSF10B-208ENST00000523752 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
TNFRSF10B-208ENST00000523752 MUC17Q685J3 4493 aa3.84□□□□□ -1.79
TNFRSF10B-208ENST00000523752 MUC2Q02817 5179 aa3.79□□□□□ -1.8
TNFRSF10B-208ENST00000523752 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
TNFRSF10B-208ENST00000523752 KRTAP4-1Q9BYQ7 146 aa3.78□□□□□ -1.8
TNFRSF10B-208ENST00000523752 LCE2DQ5TA82 110 aaPredicted RBP3.75□□□□□ -1.81
TNFRSF10B-208ENST00000523752 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
TNFRSF10B-208ENST00000523752 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
TNFRSF10B-208ENST00000523752 M0R2T5 61 aa3.7□□□□□ -1.82
TNFRSF10B-208ENST00000523752 KRTAP19-2Q3LHN2 52 aa3.7□□□□□ -1.82
TNFRSF10B-208ENST00000523752 FAT4Q6V0I7 4981 aa3.65□□□□□ -1.83
TNFRSF10B-208ENST00000523752 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
TNFRSF10B-208ENST00000523752 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
TNFRSF10B-208ENST00000523752 TNP1P09430 55 aa3.56□□□□□ -1.84
TNFRSF10B-208ENST00000523752 LCE2AQ5TA79 106 aaPredicted RBP3.54□□□□□ -1.84
TNFRSF10B-208ENST00000523752 PRO2289Q9P1D8 64 aa3.54□□□□□ -1.84
TNFRSF10B-208ENST00000523752 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
TNFRSF10B-208ENST00000523752 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
TNFRSF10B-208ENST00000523752 CRCT1Q9UGL9 99 aa3.48□□□□□ -1.85
TNFRSF10B-208ENST00000523752 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
TNFRSF10B-208ENST00000523752 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
TNFRSF10B-208ENST00000523752 LCE2CQ5TA81 110 aa3.45□□□□□ -1.86
TNFRSF10B-208ENST00000523752 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.87
TNFRSF10B-208ENST00000523752 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
TNFRSF10B-208ENST00000523752 MT1HP80294 61 aa3.35□□□□□ -1.87
TNFRSF10B-208ENST00000523752 INE1O15225 51 aa3.34□□□□□ -1.87
TNFRSF10B-208ENST00000523752 MT1FP04733 61 aa3.33□□□□□ -1.88
TNFRSF10B-208ENST00000523752 MT2AP02795 61 aa3.31□□□□□ -1.88
TNFRSF10B-208ENST00000523752 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
TNFRSF10B-208ENST00000523752 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
TNFRSF10B-208ENST00000523752 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
TNFRSF10B-208ENST00000523752 KRTAP9-8Q9BYQ0 159 aa3.28□□□□□ -1.88
TNFRSF10B-208ENST00000523752 USH2AO75445 5202 aa3.26□□□□□ -1.89
TNFRSF10B-208ENST00000523752 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
TNFRSF10B-208ENST00000523752 MT1BP07438 61 aa3.21□□□□□ -1.9
TNFRSF10B-208ENST00000523752 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
TNFRSF10B-208ENST00000523752 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
TNFRSF10B-208ENST00000523752 MT1XP80297 61 aa3.21□□□□□ -1.9
TNFRSF10B-208ENST00000523752 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
TNFRSF10B-208ENST00000523752 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
TNFRSF10B-208ENST00000523752 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
TNFRSF10B-208ENST00000523752 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
TNFRSF10B-208ENST00000523752 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
TNFRSF10B-208ENST00000523752 KRTAP9-3Q9BYQ3 159 aa3.13□□□□□ -1.91
TNFRSF10B-208ENST00000523752 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
TNFRSF10B-208ENST00000523752 KMT2DO14686 5537 aa3.08□□□□□ -1.92
TNFRSF10B-208ENST00000523752 LCE2BO14633 110 aa3.06□□□□□ -1.92
TNFRSF10B-208ENST00000523752 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
TNFRSF10B-208ENST00000523752 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
TNFRSF10B-208ENST00000523752 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
TNFRSF10B-208ENST00000523752 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.93
TNFRSF10B-208ENST00000523752 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.93
TNFRSF10B-208ENST00000523752 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms