RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 DEFB105AQ8NG35 78 aa1.73□□□□□ -2.13
SKP1-211ENST00000523359 CRIPTQ9P021 101 aa1.73□□□□□ -2.13
SKP1-211ENST00000523359 MGAM2Q2M2H8 2515 aa1.72□□□□□ -2.13
SKP1-211ENST00000523359 C10orf95Q9H7T3 257 aa1.72□□□□□ -2.13
SKP1-211ENST00000523359 RYR2Q92736 4967 aa1.71□□□□□ -2.13
SKP1-211ENST00000523359 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
SKP1-211ENST00000523359 SMR3AQ99954 134 aa1.71□□□□□ -2.14
SKP1-211ENST00000523359 TENM2Q9NT68 2774 aa1.7□□□□□ -2.14
SKP1-211ENST00000523359 LAMA1P25391 3075 aa1.7□□□□□ -2.14
SKP1-211ENST00000523359 NSD1Q96L73 2696 aaPredicted RBP1.7□□□□□ -2.14
SKP1-211ENST00000523359 TGP01266 2768 aa1.7□□□□□ -2.14
SKP1-211ENST00000523359 HTN1P15515 57 aa1.7□□□□□ -2.14
SKP1-211ENST00000523359 SPRR1BP22528 89 aa1.7□□□□□ -2.14
SKP1-211ENST00000523359 DEFB1P60022 68 aa1.7□□□□□ -2.14
SKP1-211ENST00000523359 CENPEQ02224 2701 aa1.69□□□□□ -2.14
SKP1-211ENST00000523359 H0YAA0 97 aa1.69□□□□□ -2.14
SKP1-211ENST00000523359 DEFB133Q30KQ1 61 aa1.69□□□□□ -2.14
SKP1-211ENST00000523359 Q6ZSA8 131 aa1.69□□□□□ -2.14
SKP1-211ENST00000523359 APCP25054 2843 aa1.69□□□□□ -2.14
SKP1-211ENST00000523359 MEGF8Q7Z7M0 2845 aa1.68□□□□□ -2.14
SKP1-211ENST00000523359 CUBNO60494 3623 aa1.68□□□□□ -2.14
SKP1-211ENST00000523359 NIPBLQ6KC79 2804 aaeCLIP1.68□□□□□ -2.14
SKP1-211ENST00000523359 WNK1Q9H4A3 2382 aa1.67□□□□□ -2.14
SKP1-211ENST00000523359 HERC2O95714 4834 aa1.67□□□□□ -2.14
SKP1-211ENST00000523359 H1FX-AS1Q4G0G2 97 aa1.67□□□□□ -2.14
SKP1-211ENST00000523359 HERC1Q15751 4861 aa1.67□□□□□ -2.14
SKP1-211ENST00000523359 PRO0255Q9UI72 69 aa1.66□□□□□ -2.14
SKP1-211ENST00000523359 NOP10Q9NPE3 64 aaKnown RBP1.65□□□□□ -2.15
SKP1-211ENST00000523359 MXRA5Q9NR99 2828 aa1.65□□□□□ -2.15
SKP1-211ENST00000523359 LELP1Q5T871 98 aa1.64□□□□□ -2.15
SKP1-211ENST00000523359 TENM3Q9P273 2699 aa1.64□□□□□ -2.15
SKP1-211ENST00000523359 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
SKP1-211ENST00000523359 ZNF469Q96JG9 3925 aaPredicted RBP1.64□□□□□ -2.15
SKP1-211ENST00000523359 PKDREJQ9NTG1 2253 aa1.64□□□□□ -2.15
SKP1-211ENST00000523359 DEFB130BP0DP73 79 aa1.63□□□□□ -2.15
SKP1-211ENST00000523359 DEFB130AP0DP74 79 aa1.63□□□□□ -2.15
SKP1-211ENST00000523359 PRRC2CQ9Y520 2896 aaKnown RBP1.63□□□□□ -2.15
SKP1-211ENST00000523359 AKAP6Q13023 2319 aa1.62□□□□□ -2.15
SKP1-211ENST00000523359 DCHS2Q6V1P9 2916 aa1.62□□□□□ -2.15
SKP1-211ENST00000523359 Q5VSD8 79 aa1.62□□□□□ -2.15
SKP1-211ENST00000523359 PLCE1Q9P212 2302 aa1.62□□□□□ -2.15
SKP1-211ENST00000523359 PRKDCP78527 4128 aaKnown RBP1.61□□□□□ -2.15
SKP1-211ENST00000523359 ROS1P08922 2347 aa1.61□□□□□ -2.15
SKP1-211ENST00000523359 TACC2O95359 2948 aa1.6□□□□□ -2.15
SKP1-211ENST00000523359 U3KQA8 63 aa1.6□□□□□ -2.15
SKP1-211ENST00000523359 VPS13CQ709C8 3753 aa1.6□□□□□ -2.15
SKP1-211ENST00000523359 KNL1Q8NG31 2342 aa1.6□□□□□ -2.15
SKP1-211ENST00000523359 SONP18583 2426 aaKnown RBP1.59□□□□□ -2.15
SKP1-211ENST00000523359 PRLHP81277 87 aa1.59□□□□□ -2.15
SKP1-211ENST00000523359 SVEP1Q4LDE5 3571 aa1.59□□□□□ -2.16
SKP1-211ENST00000523359 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.16
SKP1-211ENST00000523359 H3BNG1 76 aa1.58□□□□□ -2.16
SKP1-211ENST00000523359 A0A0D9SG42 100 aa1.57□□□□□ -2.16
SKP1-211ENST00000523359 ANK3Q12955 4377 aaKnown RBP1.56□□□□□ -2.16
SKP1-211ENST00000523359 DMBT1Q9UGM3 2413 aaPredicted RBP1.56□□□□□ -2.16
SKP1-211ENST00000523359 DEFB136Q30KP8 78 aa1.56□□□□□ -2.16
SKP1-211ENST00000523359 MAP1AP78559 2803 aaPredicted RBP1.56□□□□□ -2.16
SKP1-211ENST00000523359 ANK2Q01484 3957 aa1.55□□□□□ -2.16
SKP1-211ENST00000523359 STAB2Q8WWQ8 2551 aa1.54□□□□□ -2.16
SKP1-211ENST00000523359 KRTAP10-4P60372 401 aaPredicted RBP1.54□□□□□ -2.16
SKP1-211ENST00000523359 WNK2Q9Y3S1 2297 aa1.54□□□□□ -2.16
SKP1-211ENST00000523359 SPINK1P00995 79 aa1.53□□□□□ -2.16
SKP1-211ENST00000523359 LINC01556Q5JQF7 62 aa1.53□□□□□ -2.16
SKP1-211ENST00000523359 SACSQ9NZJ4 4579 aa1.53□□□□□ -2.16
SKP1-211ENST00000523359 S4R3F8 94 aa1.53□□□□□ -2.16
SKP1-211ENST00000523359 TRRAPQ9Y4A5 3859 aa1.52□□□□□ -2.17
SKP1-211ENST00000523359 SPART-AS1P0CW21 52 aa1.52□□□□□ -2.17
SKP1-211ENST00000523359 SSPOA2VEC9 5147 aa1.52□□□□□ -2.17
SKP1-211ENST00000523359 A0A096LPF7 62 aa1.51□□□□□ -2.17
SKP1-211ENST00000523359 DYNC2H1Q8NCM8 4307 aaKnown RBP1.51□□□□□ -2.17
SKP1-211ENST00000523359 NEBP20929 6669 aa1.51□□□□□ -2.17
SKP1-211ENST00000523359 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
SKP1-211ENST00000523359 APLNQ9ULZ1 77 aa1.5□□□□□ -2.17
SKP1-211ENST00000523359 KRTAP20-1Q3LI63 56 aa1.49□□□□□ -2.17
SKP1-211ENST00000523359 M0QZ58 72 aa1.48□□□□□ -2.17
SKP1-211ENST00000523359 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
SKP1-211ENST00000523359 A0A096LNI7 61 aa1.47□□□□□ -2.17
SKP1-211ENST00000523359 DNAH1Q9P2D7 4330 aa1.47□□□□□ -2.17
SKP1-211ENST00000523359 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
SKP1-211ENST00000523359 SPINK6Q6UWN8 80 aa1.46□□□□□ -2.18
SKP1-211ENST00000523359 CMYA5Q8N3K9 4069 aa1.46□□□□□ -2.18
SKP1-211ENST00000523359 SYNE2Q8WXH0 6885 aaKnown RBP1.45□□□□□ -2.18
SKP1-211ENST00000523359 COL7A1Q02388 2944 aa1.45□□□□□ -2.18
SKP1-211ENST00000523359 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
SKP1-211ENST00000523359 HTN3P15516 51 aa1.42□□□□□ -2.18
SKP1-211ENST00000523359 FRAS1Q86XX4 4008 aa1.42□□□□□ -2.18
SKP1-211ENST00000523359 RPS29P62273 56 aaKnown RBP1.4□□□□□ -2.19
SKP1-211ENST00000523359 CSMD3Q7Z407 3707 aa1.4□□□□□ -2.19
SKP1-211ENST00000523359 HECTD4Q9Y4D8 3996 aa1.39□□□□□ -2.19
SKP1-211ENST00000523359 RNF213Q63HN8 5207 aa1.39□□□□□ -2.19
SKP1-211ENST00000523359 DNAH9Q9NYC9 4486 aa1.38□□□□□ -2.19
SKP1-211ENST00000523359 HMCN2Q8NDA2 5059 aa1.38□□□□□ -2.19
SKP1-211ENST00000523359 DEFB135Q30KP9 77 aa1.38□□□□□ -2.19
SKP1-211ENST00000523359 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
SKP1-211ENST00000523359 HRNRQ86YZ3 2850 aaPredicted RBP1.37□□□□□ -2.19
SKP1-211ENST00000523359 KMT2AQ03164 3969 aa1.35□□□□□ -2.19
SKP1-211ENST00000523359 DEFB4AO15263 64 aa1.35□□□□□ -2.19
SKP1-211ENST00000523359 LYSTQ99698 3801 aa1.35□□□□□ -2.19
SKP1-211ENST00000523359 HSPG2P98160 4391 aa1.34□□□□□ -2.19
SKP1-211ENST00000523359 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms