RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 LCE2CQ5TA81 110 aa3.93□□□□□ -1.78
HMGB4-204ENST00000522796 DNAH17Q9UFH2 4485 aa3.93□□□□□ -1.78
HMGB4-204ENST00000522796 DNAH7Q8WXX0 4024 aa3.92□□□□□ -1.78
HMGB4-204ENST00000522796 DYNC2H1Q8NCM8 4307 aaKnown RBP3.9□□□□□ -1.78
HMGB4-204ENST00000522796 STARD9Q9P2P6 4700 aa3.9□□□□□ -1.79
HMGB4-204ENST00000522796 PLECQ15149 4684 aaKnown RBP3.89□□□□□ -1.79
HMGB4-204ENST00000522796 STAB2Q8WWQ8 2551 aa3.88□□□□□ -1.79
HMGB4-204ENST00000522796 FBN3Q75N90 2809 aa3.87□□□□□ -1.79
HMGB4-204ENST00000522796 KRTAP21-3Q3LHN1 58 aa3.86□□□□□ -1.79
HMGB4-204ENST00000522796 RPS29P62273 56 aaKnown RBP3.85□□□□□ -1.79
HMGB4-204ENST00000522796 DNAH11Q96DT5 4516 aa3.83□□□□□ -1.8
HMGB4-204ENST00000522796 LORP23490 312 aaPredicted RBP3.82□□□□□ -1.8
HMGB4-204ENST00000522796 KMT2AQ03164 3969 aa3.82□□□□□ -1.8
HMGB4-204ENST00000522796 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
HMGB4-204ENST00000522796 C9orf92A6NGG3 77 aa3.79□□□□□ -1.8
HMGB4-204ENST00000522796 HYDINQ4G0P3 5121 aa3.79□□□□□ -1.8
HMGB4-204ENST00000522796 MYCBP2O75592 4640 aa3.78□□□□□ -1.8
HMGB4-204ENST00000522796 DNAH2Q9P225 4427 aa3.78□□□□□ -1.8
HMGB4-204ENST00000522796 SACSQ9NZJ4 4579 aa3.74□□□□□ -1.81
HMGB4-204ENST00000522796 KRTAP4-8Q9BYQ9 185 aa3.74□□□□□ -1.81
HMGB4-204ENST00000522796 DNAH6Q9C0G6 4158 aa3.74□□□□□ -1.81
HMGB4-204ENST00000522796 Q5VSD8 79 aa3.71□□□□□ -1.82
HMGB4-204ENST00000522796 RYR2Q92736 4967 aa3.69□□□□□ -1.82
HMGB4-204ENST00000522796 KMT2CQ8NEZ4 4911 aaKnown RBP3.69□□□□□ -1.82
HMGB4-204ENST00000522796 FAT2Q9NYQ8 4349 aa3.68□□□□□ -1.82
HMGB4-204ENST00000522796 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
HMGB4-204ENST00000522796 RYR3Q15413 4870 aa3.66□□□□□ -1.82
HMGB4-204ENST00000522796 A0A1B0GVY2 172 aa3.66□□□□□ -1.82
HMGB4-204ENST00000522796 DNAH5Q8TE73 4624 aa3.66□□□□□ -1.82
HMGB4-204ENST00000522796 PKD1P98161 4303 aa3.66□□□□□ -1.82
HMGB4-204ENST00000522796 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
HMGB4-204ENST00000522796 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
HMGB4-204ENST00000522796 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
HMGB4-204ENST00000522796 PKHD1P08F94 4074 aa3.59□□□□□ -1.83
HMGB4-204ENST00000522796 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
HMGB4-204ENST00000522796 KRTAP10-2P60368 255 aa3.55□□□□□ -1.84
HMGB4-204ENST00000522796 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
HMGB4-204ENST00000522796 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
HMGB4-204ENST00000522796 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
HMGB4-204ENST00000522796 LRP1BQ9NZR2 4599 aa3.53□□□□□ -1.84
HMGB4-204ENST00000522796 TNP1P09430 55 aa3.52□□□□□ -1.85
HMGB4-204ENST00000522796 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
HMGB4-204ENST00000522796 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
HMGB4-204ENST00000522796 FAT1Q14517 4588 aa3.45□□□□□ -1.86
HMGB4-204ENST00000522796 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
HMGB4-204ENST00000522796 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
HMGB4-204ENST00000522796 KRTAP10-1P60331 282 aa3.44□□□□□ -1.86
HMGB4-204ENST00000522796 HSPG2P98160 4391 aa3.44□□□□□ -1.86
HMGB4-204ENST00000522796 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
HMGB4-204ENST00000522796 KIAA1109Q2LD37 5005 aa3.43□□□□□ -1.86
HMGB4-204ENST00000522796 RYR1P21817 5038 aa3.43□□□□□ -1.86
HMGB4-204ENST00000522796 KRTAP10-10P60014 251 aa3.42□□□□□ -1.86
HMGB4-204ENST00000522796 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
HMGB4-204ENST00000522796 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.86
HMGB4-204ENST00000522796 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
HMGB4-204ENST00000522796 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
HMGB4-204ENST00000522796 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
HMGB4-204ENST00000522796 BIRC6Q9NR09 4857 aa3.36□□□□□ -1.87
HMGB4-204ENST00000522796 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
HMGB4-204ENST00000522796 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
HMGB4-204ENST00000522796 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
HMGB4-204ENST00000522796 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
HMGB4-204ENST00000522796 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
HMGB4-204ENST00000522796 HERC2O95714 4834 aa3.31□□□□□ -1.88
HMGB4-204ENST00000522796 TNXBP22105 4242 aa3.29□□□□□ -1.88
HMGB4-204ENST00000522796 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
HMGB4-204ENST00000522796 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
HMGB4-204ENST00000522796 KRTAP4-5Q9BYR2 181 aa3.25□□□□□ -1.89
HMGB4-204ENST00000522796 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
HMGB4-204ENST00000522796 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
HMGB4-204ENST00000522796 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
HMGB4-204ENST00000522796 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
HMGB4-204ENST00000522796 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
HMGB4-204ENST00000522796 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.91
HMGB4-204ENST00000522796 MT1HL1P0DM35 61 aa3.13□□□□□ -1.91
HMGB4-204ENST00000522796 HERC1Q15751 4861 aa3.13□□□□□ -1.91
HMGB4-204ENST00000522796 LPAP08519 4548 aa3.12□□□□□ -1.91
HMGB4-204ENST00000522796 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
HMGB4-204ENST00000522796 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
HMGB4-204ENST00000522796 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
HMGB4-204ENST00000522796 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
HMGB4-204ENST00000522796 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
HMGB4-204ENST00000522796 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
HMGB4-204ENST00000522796 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
HMGB4-204ENST00000522796 LRP2P98164 4655 aa3.04□□□□□ -1.92
HMGB4-204ENST00000522796 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
HMGB4-204ENST00000522796 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
HMGB4-204ENST00000522796 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
HMGB4-204ENST00000522796 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
HMGB4-204ENST00000522796 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
HMGB4-204ENST00000522796 MUC17Q685J3 4493 aa2.97□□□□□ -1.93
HMGB4-204ENST00000522796 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
HMGB4-204ENST00000522796 UBR4Q5T4S7 5183 aa2.96□□□□□ -1.93
HMGB4-204ENST00000522796 RNF213Q63HN8 5207 aa2.93□□□□□ -1.94
HMGB4-204ENST00000522796 M0R2T5 61 aa2.93□□□□□ -1.94
HMGB4-204ENST00000522796 MUC2Q02817 5179 aa2.92□□□□□ -1.94
HMGB4-204ENST00000522796 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
HMGB4-204ENST00000522796 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
HMGB4-204ENST00000522796 KRTAP12-4P60329 112 aa2.9□□□□□ -1.94
HMGB4-204ENST00000522796 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms