RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 A0A1B0GVX0 72 aa3.91□□□□□ -1.78
PVT1-213ENST00000522414 SPINK7P58062 85 aa3.91□□□□□ -1.78
PVT1-213ENST00000522414 C8orf87E5RJ46 101 aa3.89□□□□□ -1.79
PVT1-213ENST00000522414 ATP5EP2Q5VTU8 51 aa3.89□□□□□ -1.79
PVT1-213ENST00000522414 ZCCHC13Q8WW36 166 aaKnown RBP3.89□□□□□ -1.79
PVT1-213ENST00000522414 BPY2O14599 106 aa3.88□□□□□ -1.79
PVT1-213ENST00000522414 CXCL6P80162 114 aa3.87□□□□□ -1.79
PVT1-213ENST00000522414 Q8N9L7 120 aa3.87□□□□□ -1.79
PVT1-213ENST00000522414 A0A087WVE0 104 aa3.86□□□□□ -1.79
PVT1-213ENST00000522414 HIST1H4AP62805 103 aaKnown RBP3.86□□□□□ -1.79
PVT1-213ENST00000522414 J3KT08 172 aa3.85□□□□□ -1.79
PVT1-213ENST00000522414 K7EQZ3 153 aa3.85□□□□□ -1.79
PVT1-213ENST00000522414 IMUPQ9GZP8 106 aa3.85□□□□□ -1.79
PVT1-213ENST00000522414 A8MWP4 228 aa3.83□□□□□ -1.8
PVT1-213ENST00000522414 NDUFB1O75438 58 aa3.83□□□□□ -1.8
PVT1-213ENST00000522414 WFDC13Q8IUB5 93 aa3.83□□□□□ -1.8
PVT1-213ENST00000522414 C8orf17Q9NRJ1 99 aa3.83□□□□□ -1.8
PVT1-213ENST00000522414 FAM236AA0A1B0GUQ0 79 aa3.82□□□□□ -1.8
PVT1-213ENST00000522414 FAM236BA0A1B0GV22 79 aa3.82□□□□□ -1.8
PVT1-213ENST00000522414 KRTAP19-6Q3LI70 58 aa3.81□□□□□ -1.8
PVT1-213ENST00000522414 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
PVT1-213ENST00000522414 PRR15Q8IV56 129 aa3.81□□□□□ -1.8
PVT1-213ENST00000522414 SCGB1A1P11684 91 aa3.8□□□□□ -1.8
PVT1-213ENST00000522414 MMP24-AS1A0A0U1RRL7 71 aa3.79□□□□□ -1.8
PVT1-213ENST00000522414 HCG22E2RYF7 251 aa3.78□□□□□ -1.8
PVT1-213ENST00000522414 CASC2Q6XLA1 102 aa3.77□□□□□ -1.81
PVT1-213ENST00000522414 H1FX-AS1Q4G0G2 97 aa3.76□□□□□ -1.81
PVT1-213ENST00000522414 hDV103S1A0JD37 113 aa3.75□□□□□ -1.81
PVT1-213ENST00000522414 ATOX1O00244 68 aa3.75□□□□□ -1.81
PVT1-213ENST00000522414 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
PVT1-213ENST00000522414 NDUFS5O43920 106 aa3.74□□□□□ -1.81
PVT1-213ENST00000522414 TMEM254Q8TBM7 123 aa3.74□□□□□ -1.81
PVT1-213ENST00000522414 ANAPC13Q9BS18 74 aa3.74□□□□□ -1.81
PVT1-213ENST00000522414 Q5W150 140 aa3.73□□□□□ -1.81
PVT1-213ENST00000522414 TRAV7A0A075B6U4 112 aa3.71□□□□□ -1.82
PVT1-213ENST00000522414 PCP4P48539 62 aa3.71□□□□□ -1.82
PVT1-213ENST00000522414 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
PVT1-213ENST00000522414 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
PVT1-213ENST00000522414 SMIM20Q8N5G0 67 aa3.7□□□□□ -1.82
PVT1-213ENST00000522414 SERP2Q8N6R1 65 aa3.7□□□□□ -1.82
PVT1-213ENST00000522414 COX7CP15954 63 aa3.69□□□□□ -1.82
PVT1-213ENST00000522414 C4orf26Q17RF5 130 aa3.69□□□□□ -1.82
PVT1-213ENST00000522414 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
PVT1-213ENST00000522414 NEBP20929 6669 aa3.68□□□□□ -1.82
PVT1-213ENST00000522414 CCDC179H3BU77 68 aa3.68□□□□□ -1.82
PVT1-213ENST00000522414 UQCRQO14949 82 aa3.67□□□□□ -1.82
PVT1-213ENST00000522414 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
PVT1-213ENST00000522414 C7orf65Q6ZTY9 151 aa3.66□□□□□ -1.82
PVT1-213ENST00000522414 TP53AIP1Q9HCN2 124 aa3.66□□□□□ -1.82
PVT1-213ENST00000522414 H0Y9P7 68 aa3.65□□□□□ -1.83
PVT1-213ENST00000522414 C5orf47Q569G3 176 aa3.65□□□□□ -1.83
PVT1-213ENST00000522414 C20orf197Q8N268 126 aa3.65□□□□□ -1.83
PVT1-213ENST00000522414 TRAV22A0A0B4J277 110 aa3.64□□□□□ -1.83
PVT1-213ENST00000522414 SNURFQ9Y675 71 aa3.64□□□□□ -1.83
PVT1-213ENST00000522414 MP68P56378 58 aa3.63□□□□□ -1.83
PVT1-213ENST00000522414 LINC00208Q96KT6 92 aa3.62□□□□□ -1.83
PVT1-213ENST00000522414 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
PVT1-213ENST00000522414 MT1BP07438 61 aa3.61□□□□□ -1.83
PVT1-213ENST00000522414 A6NN06 94 aa3.6□□□□□ -1.83
PVT1-213ENST00000522414 H3BPC8 53 aa3.6□□□□□ -1.83
PVT1-213ENST00000522414 KLKP1Q107X0 134 aa3.6□□□□□ -1.83
PVT1-213ENST00000522414 C1orf64Q8NEQ6 169 aa3.6□□□□□ -1.83
PVT1-213ENST00000522414 CSAG1Q6PB30 78 aa3.59□□□□□ -1.83
PVT1-213ENST00000522414 SPRR2GQ9BYE4 73 aa3.59□□□□□ -1.83
PVT1-213ENST00000522414 MDN1Q9NU22 5596 aa3.59□□□□□ -1.84
PVT1-213ENST00000522414 KRTAP19-8Q3LI54 63 aa3.58□□□□□ -1.84
PVT1-213ENST00000522414 Q5VV11 94 aa3.58□□□□□ -1.84
PVT1-213ENST00000522414 LCA10Q71F78 164 aa3.58□□□□□ -1.84
PVT1-213ENST00000522414 S4R3F8 94 aa3.58□□□□□ -1.84
PVT1-213ENST00000522414 KMT2DO14686 5537 aa3.57□□□□□ -1.84
PVT1-213ENST00000522414 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
PVT1-213ENST00000522414 H7BZZ5 65 aa3.56□□□□□ -1.84
PVT1-213ENST00000522414 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
PVT1-213ENST00000522414 CYP4F30PQ9H0H9 118 aa3.55□□□□□ -1.84
PVT1-213ENST00000522414 NDUFC1O43677 76 aa3.54□□□□□ -1.84
PVT1-213ENST00000522414 TMEM258P61165 79 aa3.52□□□□□ -1.85
PVT1-213ENST00000522414 SPANXA2-OT1Q8N9U9 137 aa3.49□□□□□ -1.85
PVT1-213ENST00000522414 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
PVT1-213ENST00000522414 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
PVT1-213ENST00000522414 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
PVT1-213ENST00000522414 CRIPTQ9P021 101 aa3.46□□□□□ -1.86
PVT1-213ENST00000522414 H0YAA0 97 aa3.44□□□□□ -1.86
PVT1-213ENST00000522414 DMAC1Q96GE9 116 aa3.44□□□□□ -1.86
PVT1-213ENST00000522414 COA5Q86WW8 74 aa3.41□□□□□ -1.86
PVT1-213ENST00000522414 SERP1Q9Y6X1 66 aa3.41□□□□□ -1.86
PVT1-213ENST00000522414 A8MUN3 132 aa3.4□□□□□ -1.87
PVT1-213ENST00000522414 ACYP2P14621 99 aa3.4□□□□□ -1.87
PVT1-213ENST00000522414 ADM2Q7Z4H4 148 aa3.39□□□□□ -1.87
PVT1-213ENST00000522414 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
PVT1-213ENST00000522414 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
PVT1-213ENST00000522414 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
PVT1-213ENST00000522414 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
PVT1-213ENST00000522414 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
PVT1-213ENST00000522414 MT1XP80297 61 aa3.36□□□□□ -1.87
PVT1-213ENST00000522414 SPRR2EP22531 72 aa3.34□□□□□ -1.87
PVT1-213ENST00000522414 SPRR2BP35325 72 aa3.34□□□□□ -1.87
PVT1-213ENST00000522414 SPRR2AP35326 72 aa3.34□□□□□ -1.87
PVT1-213ENST00000522414 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
PVT1-213ENST00000522414 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
PVT1-213ENST00000522414 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms