RNA–Protein interactions for RNA: ENST00000521134.6

KCNQ3-204, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene KCNQ3, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-204ENST00000521134 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
KCNQ3-204ENST00000521134 LCE2BO14633 110 aa5.64□□□□□ -1.51
KCNQ3-204ENST00000521134 PKHD1P08F94 4074 aa5.64□□□□□ -1.51
KCNQ3-204ENST00000521134 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
KCNQ3-204ENST00000521134 LCE2AQ5TA79 106 aaPredicted RBP5.63□□□□□ -1.51
KCNQ3-204ENST00000521134 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
KCNQ3-204ENST00000521134 APOBP04114 4563 aaKnown RBP5.62□□□□□ -1.51
KCNQ3-204ENST00000521134 KMT2CQ8NEZ4 4911 aaKnown RBP5.62□□□□□ -1.51
KCNQ3-204ENST00000521134 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
KCNQ3-204ENST00000521134 SMR3BP02814 79 aaPredicted RBP5.61□□□□□ -1.51
KCNQ3-204ENST00000521134 RPS29P62273 56 aaKnown RBP5.61□□□□□ -1.51
KCNQ3-204ENST00000521134 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
KCNQ3-204ENST00000521134 DMBT1Q9UGM3 2413 aaPredicted RBP5.59□□□□□ -1.51
KCNQ3-204ENST00000521134 RPL37P61927 97 aaKnown RBP5.58□□□□□ -1.52
KCNQ3-204ENST00000521134 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
KCNQ3-204ENST00000521134 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
KCNQ3-204ENST00000521134 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
KCNQ3-204ENST00000521134 FAT1Q14517 4588 aa5.51□□□□□ -1.53
KCNQ3-204ENST00000521134 RYR3Q15413 4870 aa5.5□□□□□ -1.53
KCNQ3-204ENST00000521134 A0A0D9SG42 100 aa5.49□□□□□ -1.53
KCNQ3-204ENST00000521134 Q5VSD8 79 aa5.48□□□□□ -1.53
KCNQ3-204ENST00000521134 KRTAP10-8P60410 259 aa5.45□□□□□ -1.54
KCNQ3-204ENST00000521134 HSPG2P98160 4391 aa5.44□□□□□ -1.54
KCNQ3-204ENST00000521134 RYR1P21817 5038 aa5.43□□□□□ -1.54
KCNQ3-204ENST00000521134 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
KCNQ3-204ENST00000521134 MYCBP2O75592 4640 aa5.4□□□□□ -1.54
KCNQ3-204ENST00000521134 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
KCNQ3-204ENST00000521134 S4R3F8 94 aa5.37□□□□□ -1.55
KCNQ3-204ENST00000521134 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
KCNQ3-204ENST00000521134 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.55
KCNQ3-204ENST00000521134 TNXBP22105 4242 aa5.33□□□□□ -1.56
KCNQ3-204ENST00000521134 FAT3Q8TDW7 4589 aa5.31□□□□□ -1.56
KCNQ3-204ENST00000521134 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
KCNQ3-204ENST00000521134 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
KCNQ3-204ENST00000521134 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
KCNQ3-204ENST00000521134 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
KCNQ3-204ENST00000521134 KIAA1109Q2LD37 5005 aa5.3□□□□□ -1.56
KCNQ3-204ENST00000521134 XP32Q5T750 250 aa5.29□□□□□ -1.56
KCNQ3-204ENST00000521134 LPAP08519 4548 aa5.28□□□□□ -1.56
KCNQ3-204ENST00000521134 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
KCNQ3-204ENST00000521134 KRTAP12-1P59990 96 aa5.22□□□□□ -1.57
KCNQ3-204ENST00000521134 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
KCNQ3-204ENST00000521134 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
KCNQ3-204ENST00000521134 KRTAP4-5Q9BYR2 181 aa5.18□□□□□ -1.58
KCNQ3-204ENST00000521134 BIRC6Q9NR09 4857 aa5.12□□□□□ -1.59
KCNQ3-204ENST00000521134 R4GN34 69 aa5.1□□□□□ -1.59
KCNQ3-204ENST00000521134 HERC2O95714 4834 aa5.1□□□□□ -1.59
KCNQ3-204ENST00000521134 LRP2P98164 4655 aa5.1□□□□□ -1.59
KCNQ3-204ENST00000521134 ABCA13Q86UQ4 5058 aa5.03□□□□□ -1.6
KCNQ3-204ENST00000521134 M0QZ58 72 aa5.03□□□□□ -1.6
KCNQ3-204ENST00000521134 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
KCNQ3-204ENST00000521134 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
KCNQ3-204ENST00000521134 MUC2Q02817 5179 aa4.84□□□□□ -1.63
KCNQ3-204ENST00000521134 INE1O15225 51 aa4.84□□□□□ -1.64
KCNQ3-204ENST00000521134 PCLOQ9Y6V0 5065 aa4.81□□□□□ -1.64
KCNQ3-204ENST00000521134 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
KCNQ3-204ENST00000521134 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
KCNQ3-204ENST00000521134 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
KCNQ3-204ENST00000521134 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
KCNQ3-204ENST00000521134 HERC1Q15751 4861 aa4.72□□□□□ -1.65
KCNQ3-204ENST00000521134 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
KCNQ3-204ENST00000521134 TNP1P09430 55 aa4.53□□□□□ -1.68
KCNQ3-204ENST00000521134 FAT4Q6V0I7 4981 aa4.53□□□□□ -1.68
KCNQ3-204ENST00000521134 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
KCNQ3-204ENST00000521134 MT1HP80294 61 aa4.45□□□□□ -1.7
KCNQ3-204ENST00000521134 UBR4Q5T4S7 5183 aa4.43□□□□□ -1.7
KCNQ3-204ENST00000521134 M0R2T5 61 aa4.39□□□□□ -1.71
KCNQ3-204ENST00000521134 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
KCNQ3-204ENST00000521134 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
KCNQ3-204ENST00000521134 MT2AP02795 61 aa4.3□□□□□ -1.72
KCNQ3-204ENST00000521134 MT1FP04733 61 aa4.27□□□□□ -1.73
KCNQ3-204ENST00000521134 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
KCNQ3-204ENST00000521134 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
KCNQ3-204ENST00000521134 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
KCNQ3-204ENST00000521134 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
KCNQ3-204ENST00000521134 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
KCNQ3-204ENST00000521134 MT1BP07438 61 aa4.08□□□□□ -1.76
KCNQ3-204ENST00000521134 KRTAP8-1Q8IUC2 63 aa4.08□□□□□ -1.76
KCNQ3-204ENST00000521134 KMT2DO14686 5537 aa4.07□□□□□ -1.76
KCNQ3-204ENST00000521134 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
KCNQ3-204ENST00000521134 USH2AO75445 5202 aa4.02□□□□□ -1.77
KCNQ3-204ENST00000521134 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
KCNQ3-204ENST00000521134 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
KCNQ3-204ENST00000521134 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
KCNQ3-204ENST00000521134 MT1XP80297 61 aa3.98□□□□□ -1.77
KCNQ3-204ENST00000521134 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
KCNQ3-204ENST00000521134 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
KCNQ3-204ENST00000521134 KRTAP10-7P60409 375 aaPredicted RBP3.92□□□□□ -1.78
KCNQ3-204ENST00000521134 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
KCNQ3-204ENST00000521134 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
KCNQ3-204ENST00000521134 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
KCNQ3-204ENST00000521134 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
KCNQ3-204ENST00000521134 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
KCNQ3-204ENST00000521134 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
KCNQ3-204ENST00000521134 FSIP2Q5CZC0 6907 aa3.77□□□□□ -1.81
KCNQ3-204ENST00000521134 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
KCNQ3-204ENST00000521134 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
KCNQ3-204ENST00000521134 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
KCNQ3-204ENST00000521134 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
KCNQ3-204ENST00000521134 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms