RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
CTNNA1-220ENST00000520260 PKHD1L1Q86WI1 4243 aa3.24□□□□□ -1.89
CTNNA1-220ENST00000520260 ASB16-AS1Q495Z4 193 aa3.24□□□□□ -1.89
CTNNA1-220ENST00000520260 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
CTNNA1-220ENST00000520260 MMP24-AS1A0A0U1RRL7 71 aa3.23□□□□□ -1.89
CTNNA1-220ENST00000520260 A6NED7 52 aa3.23□□□□□ -1.89
CTNNA1-220ENST00000520260 A8MU10 97 aa3.23□□□□□ -1.89
CTNNA1-220ENST00000520260 TP53AIP1Q9HCN2 124 aa3.23□□□□□ -1.89
CTNNA1-220ENST00000520260 DEFB116Q30KQ4 102 aa3.22□□□□□ -1.89
CTNNA1-220ENST00000520260 C7orf65Q6ZTY9 151 aa3.22□□□□□ -1.89
CTNNA1-220ENST00000520260 A0A0G2JQZ4 141 aa3.21□□□□□ -1.9
CTNNA1-220ENST00000520260 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
CTNNA1-220ENST00000520260 SPTSSBQ8NFR3 76 aa3.21□□□□□ -1.9
CTNNA1-220ENST00000520260 RETNLBQ9BQ08 111 aa3.2□□□□□ -1.9
CTNNA1-220ENST00000520260 FAT3Q8TDW7 4589 aa3.19□□□□□ -1.9
CTNNA1-220ENST00000520260 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
CTNNA1-220ENST00000520260 HRES1P13985 223 aa3.17□□□□□ -1.9
CTNNA1-220ENST00000520260 Q96NJ1 140 aa3.17□□□□□ -1.9
CTNNA1-220ENST00000520260 C8orf17Q9NRJ1 99 aa3.17□□□□□ -1.9
CTNNA1-220ENST00000520260 HERC1Q15751 4861 aa3.16□□□□□ -1.9
CTNNA1-220ENST00000520260 C8orf87E5RJ46 101 aa3.16□□□□□ -1.9
CTNNA1-220ENST00000520260 TNXBP22105 4242 aa3.16□□□□□ -1.9
CTNNA1-220ENST00000520260 SPINK7P58062 85 aa3.15□□□□□ -1.91
CTNNA1-220ENST00000520260 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.91
CTNNA1-220ENST00000520260 PCOTHQ58A44 107 aa3.15□□□□□ -1.91
CTNNA1-220ENST00000520260 A0A1B0GVX0 72 aa3.14□□□□□ -1.91
CTNNA1-220ENST00000520260 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
CTNNA1-220ENST00000520260 MRPL34Q9BQ48 92 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-220ENST00000520260 LINC00313P59037 77 aa3.13□□□□□ -1.91
CTNNA1-220ENST00000520260 C9orf92A6NGG3 77 aa3.12□□□□□ -1.91
CTNNA1-220ENST00000520260 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
CTNNA1-220ENST00000520260 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
CTNNA1-220ENST00000520260 IGHV6-1A0A0B4J1U7 121 aa3.11□□□□□ -1.91
CTNNA1-220ENST00000520260 ACYP2P14621 99 aa3.11□□□□□ -1.91
CTNNA1-220ENST00000520260 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
CTNNA1-220ENST00000520260 RPL37P61927 97 aaKnown RBP3.09□□□□□ -1.91
CTNNA1-220ENST00000520260 DMAC1Q96GE9 116 aa3.09□□□□□ -1.91
CTNNA1-220ENST00000520260 KRTAP3-1Q9BYR8 98 aa3.09□□□□□ -1.91
CTNNA1-220ENST00000520260 LINC01554Q52M75 96 aa3.06□□□□□ -1.92
CTNNA1-220ENST00000520260 Q5W150 140 aa3.06□□□□□ -1.92
CTNNA1-220ENST00000520260 C20orf166-AS1Q96NR2 134 aa3.06□□□□□ -1.92
CTNNA1-220ENST00000520260 A0A1B0GU69 56 aa3.05□□□□□ -1.92
CTNNA1-220ENST00000520260 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
CTNNA1-220ENST00000520260 A8MUU9 505 aa3.04□□□□□ -1.92
CTNNA1-220ENST00000520260 COX6B2Q6YFQ2 88 aa3.04□□□□□ -1.92
CTNNA1-220ENST00000520260 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
CTNNA1-220ENST00000520260 KRTAP23-1A1A580 65 aa3.03□□□□□ -1.92
CTNNA1-220ENST00000520260 UQCR11O14957 56 aa3.03□□□□□ -1.92
CTNNA1-220ENST00000520260 IGKV2-30P06310 120 aa3.03□□□□□ -1.92
CTNNA1-220ENST00000520260 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
CTNNA1-220ENST00000520260 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
CTNNA1-220ENST00000520260 LRP2P98164 4655 aa3.02□□□□□ -1.93
CTNNA1-220ENST00000520260 ADM2Q7Z4H4 148 aa3.01□□□□□ -1.93
CTNNA1-220ENST00000520260 IGKV2D-30A0A075B6S6 120 aa2.98□□□□□ -1.93
CTNNA1-220ENST00000520260 KRTAP16-1A8MUX0 517 aa2.97□□□□□ -1.93
CTNNA1-220ENST00000520260 CSAG1Q6PB30 78 aa2.96□□□□□ -1.94
CTNNA1-220ENST00000520260 M0R2T5 61 aa2.95□□□□□ -1.94
CTNNA1-220ENST00000520260 LPAP08519 4548 aa2.94□□□□□ -1.94
CTNNA1-220ENST00000520260 RNF213Q63HN8 5207 aa2.94□□□□□ -1.94
CTNNA1-220ENST00000520260 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
CTNNA1-220ENST00000520260 KRTAP5-9P26371 169 aa2.9□□□□□ -1.95
CTNNA1-220ENST00000520260 MUC2Q02817 5179 aa2.89□□□□□ -1.95
CTNNA1-220ENST00000520260 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
CTNNA1-220ENST00000520260 H0YAA0 97 aa2.88□□□□□ -1.95
CTNNA1-220ENST00000520260 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
CTNNA1-220ENST00000520260 A0A1B0GU33 70 aa2.86□□□□□ -1.95
CTNNA1-220ENST00000520260 ROMO1P60602 79 aa2.86□□□□□ -1.95
CTNNA1-220ENST00000520260 H1FX-AS1Q4G0G2 97 aa2.86□□□□□ -1.95
CTNNA1-220ENST00000520260 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
CTNNA1-220ENST00000520260 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
CTNNA1-220ENST00000520260 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
CTNNA1-220ENST00000520260 KRTAP15-1Q3LI76 137 aa2.83□□□□□ -1.96
CTNNA1-220ENST00000520260 K7ERS5 55 aa2.82□□□□□ -1.96
CTNNA1-220ENST00000520260 MT1HP80294 61 aa2.82□□□□□ -1.96
CTNNA1-220ENST00000520260 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
CTNNA1-220ENST00000520260 S4R3F8 94 aa2.81□□□□□ -1.96
CTNNA1-220ENST00000520260 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
CTNNA1-220ENST00000520260 KRTAP19-2Q3LHN2 52 aa2.78□□□□□ -1.96
CTNNA1-220ENST00000520260 P0C880 135 aa2.76□□□□□ -1.97
CTNNA1-220ENST00000520260 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
CTNNA1-220ENST00000520260 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
CTNNA1-220ENST00000520260 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
CTNNA1-220ENST00000520260 CRIPTQ9P021 101 aa2.71□□□□□ -1.98
CTNNA1-220ENST00000520260 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
CTNNA1-220ENST00000520260 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
CTNNA1-220ENST00000520260 MT2AP02795 61 aa2.65□□□□□ -1.99
CTNNA1-220ENST00000520260 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
CTNNA1-220ENST00000520260 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
CTNNA1-220ENST00000520260 A0A0D9SG42 100 aa2.62□□□□□ -1.99
CTNNA1-220ENST00000520260 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
CTNNA1-220ENST00000520260 R4GN34 69 aa2.62□□□□□ -1.99
CTNNA1-220ENST00000520260 MT1FP04733 61 aa2.61□□□□□ -1.99
CTNNA1-220ENST00000520260 C10orf95Q9H7T3 257 aa2.61□□□□□ -1.99
CTNNA1-220ENST00000520260 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
CTNNA1-220ENST00000520260 LCE1AQ5T7P2 110 aa2.6□□□□□ -1.99
CTNNA1-220ENST00000520260 KRTAP12-2P59991 146 aa2.59□□□□□ -1.99
CTNNA1-220ENST00000520260 M0QZ58 72 aa2.58□□□□□ -2
CTNNA1-220ENST00000520260 A0A0A0MQY5 61 aa2.57□□□□□ -2
CTNNA1-220ENST00000520260 PLAC4Q8WY50 150 aa2.57□□□□□ -2
CTNNA1-220ENST00000520260 PRO2289Q9P1D8 64 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms