RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 SPINK7P58062 85 aa7.36□□□□□ -1.23
VPS37A-206ENST00000520140 TP53AIP1Q9HCN2 124 aa7.36□□□□□ -1.23
VPS37A-206ENST00000520140 LCA10Q71F78 164 aa7.34□□□□□ -1.23
VPS37A-206ENST00000520140 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
VPS37A-206ENST00000520140 A6NED7 52 aa7.34□□□□□ -1.23
VPS37A-206ENST00000520140 IGKV2-30P06310 120 aa7.34□□□□□ -1.23
VPS37A-206ENST00000520140 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.23
VPS37A-206ENST00000520140 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
VPS37A-206ENST00000520140 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
VPS37A-206ENST00000520140 LINC01558Q9Y6Z2 57 aa7.29□□□□□ -1.24
VPS37A-206ENST00000520140 A6NN06 94 aa7.28□□□□□ -1.24
VPS37A-206ENST00000520140 HRES1P13985 223 aa7.27□□□□□ -1.25
VPS37A-206ENST00000520140 C7orf65Q6ZTY9 151 aa7.27□□□□□ -1.25
VPS37A-206ENST00000520140 KRTAP19-2Q3LHN2 52 aa7.25□□□□□ -1.25
VPS37A-206ENST00000520140 COX6B2Q6YFQ2 88 aa7.25□□□□□ -1.25
VPS37A-206ENST00000520140 RBM12B-AS1Q9P1G2 102 aa7.24□□□□□ -1.25
VPS37A-206ENST00000520140 LCE2CQ5TA81 110 aa7.21□□□□□ -1.25
VPS37A-206ENST00000520140 FLGP20930 4061 aaPredicted RBP7.12□□□□□ -1.27
VPS37A-206ENST00000520140 MT1HP80294 61 aa7.1□□□□□ -1.27
VPS37A-206ENST00000520140 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
VPS37A-206ENST00000520140 M0R2T5 61 aa7.06□□□□□ -1.28
VPS37A-206ENST00000520140 ACYP2P14621 99 aa7.06□□□□□ -1.28
VPS37A-206ENST00000520140 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
VPS37A-206ENST00000520140 H1FX-AS1Q4G0G2 97 aa7.01□□□□□ -1.29
VPS37A-206ENST00000520140 DMAC1Q96GE9 116 aa7□□□□□ -1.29
VPS37A-206ENST00000520140 A0A1B0GU69 56 aa6.95□□□□□ -1.3
VPS37A-206ENST00000520140 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
VPS37A-206ENST00000520140 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
VPS37A-206ENST00000520140 S4R3F8 94 aa6.9□□□□□ -1.3
VPS37A-206ENST00000520140 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
VPS37A-206ENST00000520140 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
VPS37A-206ENST00000520140 MIR22HGQ0VDD5 57 aa6.87□□□□□ -1.31
VPS37A-206ENST00000520140 UQCR11O14957 56 aa6.86□□□□□ -1.31
VPS37A-206ENST00000520140 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
VPS37A-206ENST00000520140 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
VPS37A-206ENST00000520140 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
VPS37A-206ENST00000520140 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
VPS37A-206ENST00000520140 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
VPS37A-206ENST00000520140 MT2AP02795 61 aa6.73□□□□□ -1.33
VPS37A-206ENST00000520140 MT1FP04733 61 aa6.7□□□□□ -1.34
VPS37A-206ENST00000520140 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
VPS37A-206ENST00000520140 FSIP2Q5CZC0 6907 aa6.58□□□□□ -1.36
VPS37A-206ENST00000520140 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
VPS37A-206ENST00000520140 H0YAA0 97 aa6.56□□□□□ -1.36
VPS37A-206ENST00000520140 H3BS24 57 aa6.56□□□□□ -1.36
VPS37A-206ENST00000520140 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
VPS37A-206ENST00000520140 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
VPS37A-206ENST00000520140 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
VPS37A-206ENST00000520140 A0A1B0GU33 70 aa6.5□□□□□ -1.37
VPS37A-206ENST00000520140 P0C880 135 aa6.49□□□□□ -1.37
VPS37A-206ENST00000520140 USH2AO75445 5202 aa6.48□□□□□ -1.37
VPS37A-206ENST00000520140 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.37
VPS37A-206ENST00000520140 LCE2BO14633 110 aa6.46□□□□□ -1.38
VPS37A-206ENST00000520140 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
VPS37A-206ENST00000520140 ROMO1P60602 79 aa6.4□□□□□ -1.38
VPS37A-206ENST00000520140 K7ERS5 55 aa6.38□□□□□ -1.39
VPS37A-206ENST00000520140 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
VPS37A-206ENST00000520140 CRIPTQ9P021 101 aa6.37□□□□□ -1.39
VPS37A-206ENST00000520140 R4GN34 69 aa6.36□□□□□ -1.39
VPS37A-206ENST00000520140 M0QZ58 72 aa6.34□□□□□ -1.4
VPS37A-206ENST00000520140 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
VPS37A-206ENST00000520140 CRCT1Q9UGL9 99 aa6.26□□□□□ -1.41
VPS37A-206ENST00000520140 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
VPS37A-206ENST00000520140 MT1BP07438 61 aa6.23□□□□□ -1.41
VPS37A-206ENST00000520140 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
VPS37A-206ENST00000520140 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
VPS37A-206ENST00000520140 A0A0D9SG42 100 aa6.14□□□□□ -1.43
VPS37A-206ENST00000520140 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
VPS37A-206ENST00000520140 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
VPS37A-206ENST00000520140 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
VPS37A-206ENST00000520140 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
VPS37A-206ENST00000520140 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
VPS37A-206ENST00000520140 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
VPS37A-206ENST00000520140 KRTAP12-2P59991 146 aa5.99□□□□□ -1.45
VPS37A-206ENST00000520140 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
VPS37A-206ENST00000520140 MT1XP80297 61 aa5.95□□□□□ -1.46
VPS37A-206ENST00000520140 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
VPS37A-206ENST00000520140 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
VPS37A-206ENST00000520140 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
VPS37A-206ENST00000520140 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
VPS37A-206ENST00000520140 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
VPS37A-206ENST00000520140 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
VPS37A-206ENST00000520140 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
VPS37A-206ENST00000520140 KMT2DO14686 5537 aa5.81□□□□□ -1.48
VPS37A-206ENST00000520140 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
VPS37A-206ENST00000520140 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
VPS37A-206ENST00000520140 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
VPS37A-206ENST00000520140 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.51
VPS37A-206ENST00000520140 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
VPS37A-206ENST00000520140 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
VPS37A-206ENST00000520140 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
VPS37A-206ENST00000520140 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
VPS37A-206ENST00000520140 TNP1P09430 55 aa5.53□□□□□ -1.52
VPS37A-206ENST00000520140 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
VPS37A-206ENST00000520140 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
VPS37A-206ENST00000520140 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
VPS37A-206ENST00000520140 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
VPS37A-206ENST00000520140 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
VPS37A-206ENST00000520140 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
VPS37A-206ENST00000520140 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms