RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 A6NN06 94 aa4.44□□□□□ -1.7
HMGB4-203ENST00000519684 A8MU10 97 aa4.43□□□□□ -1.7
HMGB4-203ENST00000519684 COX6B2Q6YFQ2 88 aa4.43□□□□□ -1.7
HMGB4-203ENST00000519684 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
HMGB4-203ENST00000519684 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
HMGB4-203ENST00000519684 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
HMGB4-203ENST00000519684 TPRXLQ17RH7 258 aa4.39□□□□□ -1.71
HMGB4-203ENST00000519684 DMBT1Q9UGM3 2413 aaPredicted RBP4.38□□□□□ -1.71
HMGB4-203ENST00000519684 ADM2Q7Z4H4 148 aa4.38□□□□□ -1.71
HMGB4-203ENST00000519684 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
HMGB4-203ENST00000519684 EPPK1P58107 5090 aaKnown RBP4.37□□□□□ -1.71
HMGB4-203ENST00000519684 UQCR11O14957 56 aa4.37□□□□□ -1.71
HMGB4-203ENST00000519684 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
HMGB4-203ENST00000519684 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
HMGB4-203ENST00000519684 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.72
HMGB4-203ENST00000519684 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
HMGB4-203ENST00000519684 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
HMGB4-203ENST00000519684 S4R3F8 94 aa4.3□□□□□ -1.72
HMGB4-203ENST00000519684 H1FX-AS1Q4G0G2 97 aa4.28□□□□□ -1.72
HMGB4-203ENST00000519684 A0A1B0GU33 70 aa4.27□□□□□ -1.73
HMGB4-203ENST00000519684 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
HMGB4-203ENST00000519684 H0YAA0 97 aa4.21□□□□□ -1.74
HMGB4-203ENST00000519684 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
HMGB4-203ENST00000519684 ROMO1P60602 79 aa4.18□□□□□ -1.74
HMGB4-203ENST00000519684 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
HMGB4-203ENST00000519684 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
HMGB4-203ENST00000519684 LPAP08519 4548 aa4.16□□□□□ -1.74
HMGB4-203ENST00000519684 LRP2P98164 4655 aa4.16□□□□□ -1.74
HMGB4-203ENST00000519684 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
HMGB4-203ENST00000519684 LUZP6Q538Z0 58 aa4.15□□□□□ -1.74
HMGB4-203ENST00000519684 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
HMGB4-203ENST00000519684 HERC2O95714 4834 aa4.14□□□□□ -1.75
HMGB4-203ENST00000519684 K7ERS5 55 aa4.13□□□□□ -1.75
HMGB4-203ENST00000519684 P0C880 135 aa4.11□□□□□ -1.75
HMGB4-203ENST00000519684 KRTAP4-1Q9BYQ7 146 aa4.1□□□□□ -1.75
HMGB4-203ENST00000519684 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.76
HMGB4-203ENST00000519684 A0A0D9SG42 100 aa4.07□□□□□ -1.76
HMGB4-203ENST00000519684 M0QZ58 72 aa4.04□□□□□ -1.76
HMGB4-203ENST00000519684 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
HMGB4-203ENST00000519684 NDUFAF8A1L188 74 aa4□□□□□ -1.77
HMGB4-203ENST00000519684 KRTAP19-2Q3LHN2 52 aa4□□□□□ -1.77
HMGB4-203ENST00000519684 R4GN34 69 aa3.98□□□□□ -1.77
HMGB4-203ENST00000519684 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
HMGB4-203ENST00000519684 KRTAP12-2P59991 146 aa3.95□□□□□ -1.78
HMGB4-203ENST00000519684 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
HMGB4-203ENST00000519684 PCLOQ9Y6V0 5065 aa3.94□□□□□ -1.78
HMGB4-203ENST00000519684 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
HMGB4-203ENST00000519684 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
HMGB4-203ENST00000519684 HERC1Q15751 4861 aa3.89□□□□□ -1.79
HMGB4-203ENST00000519684 CRIPTQ9P021 101 aa3.86□□□□□ -1.79
HMGB4-203ENST00000519684 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
HMGB4-203ENST00000519684 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
HMGB4-203ENST00000519684 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
HMGB4-203ENST00000519684 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
HMGB4-203ENST00000519684 M0R2T5 61 aa3.82□□□□□ -1.8
HMGB4-203ENST00000519684 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
HMGB4-203ENST00000519684 MUC2Q02817 5179 aa3.8□□□□□ -1.8
HMGB4-203ENST00000519684 MT1HP80294 61 aa3.78□□□□□ -1.8
HMGB4-203ENST00000519684 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
HMGB4-203ENST00000519684 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
HMGB4-203ENST00000519684 RNF213Q63HN8 5207 aa3.71□□□□□ -1.81
HMGB4-203ENST00000519684 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
HMGB4-203ENST00000519684 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
HMGB4-203ENST00000519684 MT2AP02795 61 aa3.67□□□□□ -1.82
HMGB4-203ENST00000519684 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
HMGB4-203ENST00000519684 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
HMGB4-203ENST00000519684 MT1FP04733 61 aa3.66□□□□□ -1.82
HMGB4-203ENST00000519684 KRTAP19-1Q8IUB9 90 aa3.65□□□□□ -1.82
HMGB4-203ENST00000519684 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
HMGB4-203ENST00000519684 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
HMGB4-203ENST00000519684 TNP1P09430 55 aa3.6□□□□□ -1.83
HMGB4-203ENST00000519684 PP632Q6XCG6 107 aa3.6□□□□□ -1.83
HMGB4-203ENST00000519684 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
HMGB4-203ENST00000519684 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
HMGB4-203ENST00000519684 MT1BP07438 61 aa3.49□□□□□ -1.85
HMGB4-203ENST00000519684 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
HMGB4-203ENST00000519684 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
HMGB4-203ENST00000519684 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
HMGB4-203ENST00000519684 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
HMGB4-203ENST00000519684 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
HMGB4-203ENST00000519684 MT1XP80297 61 aa3.43□□□□□ -1.86
HMGB4-203ENST00000519684 PRO2289Q9P1D8 64 aa3.43□□□□□ -1.86
HMGB4-203ENST00000519684 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
HMGB4-203ENST00000519684 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
HMGB4-203ENST00000519684 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
HMGB4-203ENST00000519684 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
HMGB4-203ENST00000519684 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
HMGB4-203ENST00000519684 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
HMGB4-203ENST00000519684 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
HMGB4-203ENST00000519684 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
HMGB4-203ENST00000519684 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
HMGB4-203ENST00000519684 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
HMGB4-203ENST00000519684 KRTAP4-8A0A0G2JLE6 195 aa3.21□□□□□ -1.89
HMGB4-203ENST00000519684 USH2AO75445 5202 aa3.17□□□□□ -1.9
HMGB4-203ENST00000519684 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
HMGB4-203ENST00000519684 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
HMGB4-203ENST00000519684 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
HMGB4-203ENST00000519684 INE1O15225 51 aa3.12□□□□□ -1.91
HMGB4-203ENST00000519684 KRTAP4-7Q9BYR0 210 aa3.1□□□□□ -1.91
HMGB4-203ENST00000519684 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms