RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ITPR1Q14643 2758 aa-0.07□□□□□ -2.42
PTPN12-213ENST00000519553 TRIOO75962 3097 aa-0.07□□□□□ -2.42
PTPN12-213ENST00000519553 FAM208AQ9UK61 1670 aaKnown RBP-0.08□□□□□ -2.42
PTPN12-213ENST00000519553 MACF1Q9UPN3 7388 aaKnown RBP-0.08□□□□□ -2.42
PTPN12-213ENST00000519553 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.08□□□□□ -2.42
PTPN12-213ENST00000519553 CLPSL2Q6UWE3 100 aa-0.08□□□□□ -2.42
PTPN12-213ENST00000519553 KAAG1Q9UBP8 84 aa-0.08□□□□□ -2.42
PTPN12-213ENST00000519553 COL12A1Q99715 3063 aa-0.08□□□□□ -2.42
PTPN12-213ENST00000519553 MUC12Q9UKN1 5478 aa-0.08□□□□□ -2.42
PTPN12-213ENST00000519553 USP9XQ93008 2570 aaPredicted RBP-0.08□□□□□ -2.42
PTPN12-213ENST00000519553 A8MTW9 85 aa-0.09□□□□□ -2.42
PTPN12-213ENST00000519553 M0QY20 66 aa-0.09□□□□□ -2.42
PTPN12-213ENST00000519553 MT4P47944 62 aa-0.09□□□□□ -2.42
PTPN12-213ENST00000519553 DEFB1P60022 68 aa-0.09□□□□□ -2.42
PTPN12-213ENST00000519553 DNAH1Q9P2D7 4330 aa-0.09□□□□□ -2.42
PTPN12-213ENST00000519553 TEX15Q9BXT5 2789 aa-0.09□□□□□ -2.42
PTPN12-213ENST00000519553 USH2AO75445 5202 aa-0.1□□□□□ -2.42
PTPN12-213ENST00000519553 LRBAP50851 2863 aa-0.1□□□□□ -2.43
PTPN12-213ENST00000519553 RELNP78509 3460 aa-0.1□□□□□ -2.43
PTPN12-213ENST00000519553 M0QZ58 72 aa-0.1□□□□□ -2.43
PTPN12-213ENST00000519553 SPART-AS1P0CW21 52 aa-0.1□□□□□ -2.43
PTPN12-213ENST00000519553 KRTAP20-2Q3LI61 65 aa-0.1□□□□□ -2.43
PTPN12-213ENST00000519553 TLN2Q9Y4G6 2542 aa-0.1□□□□□ -2.43
PTPN12-213ENST00000519553 DDX60Q8IY21 1712 aaKnown RBP-0.1□□□□□ -2.43
PTPN12-213ENST00000519553 ADGRG4Q8IZF6 3080 aa-0.1□□□□□ -2.43
PTPN12-213ENST00000519553 PCLOQ9Y6V0 5065 aa-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 DOPEY1Q5JWR5 2465 aa-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 C5orf42Q9H799 3197 aa-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 MT1HP80294 61 aa-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 WFDC10BQ8IUB3 73 aa-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 CELSR3Q9NYQ7 3312 aa-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 CHD7Q9P2D1 2997 aa-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 NIPBLQ6KC79 2804 aaeCLIP-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 LAMA2P24043 3122 aaKnown RBP-0.11□□□□□ -2.43
PTPN12-213ENST00000519553 SPTAN1Q13813 2472 aaKnown RBP-0.12□□□□□ -2.43
PTPN12-213ENST00000519553 SRCAPQ6ZRS2 3230 aa-0.12□□□□□ -2.43
PTPN12-213ENST00000519553 DEFB131AP59861 70 aa-0.12□□□□□ -2.43
PTPN12-213ENST00000519553 UBR4Q5T4S7 5183 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 MYO9AB2RTY4 2548 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 TFF3Q07654 80 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 KRTAP8-1Q8IUC2 63 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 SMIM2Q9BVW6 85 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 HERC1Q15751 4861 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 ITPR2Q14571 2701 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 CFAP46Q8IYW2 2715 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 DNAH8Q96JB1 4490 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 COL6A5A8TX70 2615 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 NFAT5O94916 1531 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 FAT1Q14517 4588 aa-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 KMT2CQ8NEZ4 4911 aaKnown RBP-0.13□□□□□ -2.43
PTPN12-213ENST00000519553 CEP295Q9C0D2 2601 aa-0.14□□□□□ -2.43
PTPN12-213ENST00000519553 MGAQ8IWI9 3026 aa-0.14□□□□□ -2.43
PTPN12-213ENST00000519553 SMR3BP02814 79 aaPredicted RBP-0.14□□□□□ -2.43
PTPN12-213ENST00000519553 KRTAP19-5Q3LI72 72 aa-0.14□□□□□ -2.43
PTPN12-213ENST00000519553 EPPK1P58107 5090 aaKnown RBP-0.14□□□□□ -2.43
PTPN12-213ENST00000519553 CFAP54Q96N23 3096 aa-0.15□□□□□ -2.43
PTPN12-213ENST00000519553 DNAH7Q8WXX0 4024 aa-0.15□□□□□ -2.43
PTPN12-213ENST00000519553 LAMA3Q16787 3333 aa-0.15□□□□□ -2.43
PTPN12-213ENST00000519553 MT1EP04732 61 aa-0.15□□□□□ -2.43
PTPN12-213ENST00000519553 MT1XP80297 61 aa-0.15□□□□□ -2.43
PTPN12-213ENST00000519553 STARD9Q9P2P6 4700 aa-0.15□□□□□ -2.43
PTPN12-213ENST00000519553 IQGAP2Q13576 1575 aa-0.15□□□□□ -2.43
PTPN12-213ENST00000519553 TRPM2O94759 1503 aa-0.16□□□□□ -2.43
PTPN12-213ENST00000519553 POLR2KP53803 58 aaKnown RBP-0.16□□□□□ -2.44
PTPN12-213ENST00000519553 MT1LQ93083 61 aa-0.16□□□□□ -2.44
PTPN12-213ENST00000519553 EYSQ5T1H1 3165 aa-0.16□□□□□ -2.44
PTPN12-213ENST00000519553 PRUNE2Q8WUY3 3088 aa-0.16□□□□□ -2.44
PTPN12-213ENST00000519553 CRYBG3Q68DQ2 2970 aa-0.16□□□□□ -2.44
PTPN12-213ENST00000519553 CSMD1Q96PZ7 3565 aa-0.16□□□□□ -2.44
PTPN12-213ENST00000519553 MUC17Q685J3 4493 aa-0.17□□□□□ -2.44
PTPN12-213ENST00000519553 MT1HL1P0DM35 61 aa-0.17□□□□□ -2.44
PTPN12-213ENST00000519553 LEAP2Q969E1 77 aa-0.17□□□□□ -2.44
PTPN12-213ENST00000519553 DMXL2Q8TDJ6 3036 aa-0.17□□□□□ -2.44
PTPN12-213ENST00000519553 ATMQ13315 3056 aa-0.17□□□□□ -2.44
PTPN12-213ENST00000519553 NDUFA1O15239 70 aa-0.18□□□□□ -2.44
PTPN12-213ENST00000519553 HERC2O95714 4834 aa-0.18□□□□□ -2.44
PTPN12-213ENST00000519553 RYR1P21817 5038 aa-0.18□□□□□ -2.44
PTPN12-213ENST00000519553 TLN1Q9Y490 2541 aaKnown RBP-0.19□□□□□ -2.44
PTPN12-213ENST00000519553 RNF213Q63HN8 5207 aa-0.19□□□□□ -2.44
PTPN12-213ENST00000519553 FREM2Q5SZK8 3169 aa-0.19□□□□□ -2.44
PTPN12-213ENST00000519553 DEFB136Q30KP8 78 aa-0.19□□□□□ -2.44
PTPN12-213ENST00000519553 CSMD2Q7Z408 3487 aa-0.19□□□□□ -2.44
PTPN12-213ENST00000519553 ZFHX4Q86UP3 3567 aa-0.19□□□□□ -2.44
PTPN12-213ENST00000519553 FRYLO94915 3013 aa-0.19□□□□□ -2.44
PTPN12-213ENST00000519553 HYDINQ4G0P3 5121 aa-0.2□□□□□ -2.44
PTPN12-213ENST00000519553 BIRC6Q9NR09 4857 aa-0.2□□□□□ -2.44
PTPN12-213ENST00000519553 DEFB4AO15263 64 aa-0.2□□□□□ -2.44
PTPN12-213ENST00000519553 MT2AP02795 61 aa-0.2□□□□□ -2.44
PTPN12-213ENST00000519553 MT1MQ8N339 61 aa-0.2□□□□□ -2.44
PTPN12-213ENST00000519553 CLTCL1P53675 1640 aa-0.2□□□□□ -2.44
PTPN12-213ENST00000519553 KIAA1109Q2LD37 5005 aa-0.21□□□□□ -2.44
PTPN12-213ENST00000519553 MT1GP13640 62 aa-0.21□□□□□ -2.44
PTPN12-213ENST00000519553 TOMM7Q9P0U1 55 aa-0.21□□□□□ -2.44
PTPN12-213ENST00000519553 BOD1L1Q8NFC6 3051 aa-0.21□□□□□ -2.44
PTPN12-213ENST00000519553 SMG1Q96Q15 3661 aaKnown RBP-0.21□□□□□ -2.44
PTPN12-213ENST00000519553 RPS29P62273 56 aaKnown RBP-0.22□□□□□ -2.44
PTPN12-213ENST00000519553 LINC01590Q5TEZ4 76 aa-0.22□□□□□ -2.44
PTPN12-213ENST00000519553 TOMM5Q8N4H5 51 aa-0.22□□□□□ -2.44
PTPN12-213ENST00000519553 PLECQ15149 4684 aaKnown RBP-0.22□□□□□ -2.44
PTPN12-213ENST00000519553 CMYA5Q8N3K9 4069 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms