RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 DNAH7Q8WXX0 4024 aa3.97□□□□□ -1.77
SLIT3-205ENST00000519486 M0QZ58 72 aa3.95□□□□□ -1.78
SLIT3-205ENST00000519486 DNAH8Q96JB1 4490 aa3.94□□□□□ -1.78
SLIT3-205ENST00000519486 DNAH17Q9UFH2 4485 aa3.93□□□□□ -1.78
SLIT3-205ENST00000519486 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
SLIT3-205ENST00000519486 FRAS1Q86XX4 4008 aa3.92□□□□□ -1.78
SLIT3-205ENST00000519486 DNAH5Q8TE73 4624 aa3.91□□□□□ -1.78
SLIT3-205ENST00000519486 DNAH2Q9P225 4427 aa3.91□□□□□ -1.78
SLIT3-205ENST00000519486 KRTAP3-3Q9BYR6 98 aa3.88□□□□□ -1.79
SLIT3-205ENST00000519486 KRTAP3-2Q9BYR7 98 aa3.88□□□□□ -1.79
SLIT3-205ENST00000519486 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
SLIT3-205ENST00000519486 KRTAP10-4P60372 401 aaPredicted RBP3.88□□□□□ -1.79
SLIT3-205ENST00000519486 KRTAP17-1Q9BYP8 105 aa3.88□□□□□ -1.79
SLIT3-205ENST00000519486 ALMS1Q8TCU4 4167 aa3.88□□□□□ -1.79
SLIT3-205ENST00000519486 FAT1Q14517 4588 aa3.88□□□□□ -1.79
SLIT3-205ENST00000519486 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
SLIT3-205ENST00000519486 DNAH6Q9C0G6 4158 aa3.87□□□□□ -1.79
SLIT3-205ENST00000519486 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
SLIT3-205ENST00000519486 LCE2DQ5TA82 110 aaPredicted RBP3.85□□□□□ -1.79
SLIT3-205ENST00000519486 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
SLIT3-205ENST00000519486 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
SLIT3-205ENST00000519486 KRTAP10-6P60371 365 aaPredicted RBP3.84□□□□□ -1.79
SLIT3-205ENST00000519486 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
SLIT3-205ENST00000519486 VPS13BQ7Z7G8 4022 aa3.82□□□□□ -1.8
SLIT3-205ENST00000519486 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
SLIT3-205ENST00000519486 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
SLIT3-205ENST00000519486 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
SLIT3-205ENST00000519486 MYCBP2O75592 4640 aa3.75□□□□□ -1.81
SLIT3-205ENST00000519486 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
SLIT3-205ENST00000519486 RYR2Q92736 4967 aa3.72□□□□□ -1.81
SLIT3-205ENST00000519486 HYDINQ4G0P3 5121 aa3.72□□□□□ -1.81
SLIT3-205ENST00000519486 PKHD1P08F94 4074 aa3.72□□□□□ -1.81
SLIT3-205ENST00000519486 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
SLIT3-205ENST00000519486 SACSQ9NZJ4 4579 aa3.68□□□□□ -1.82
SLIT3-205ENST00000519486 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
SLIT3-205ENST00000519486 TNP1P09430 55 aa3.66□□□□□ -1.82
SLIT3-205ENST00000519486 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.82
SLIT3-205ENST00000519486 APOBP04114 4563 aaKnown RBP3.65□□□□□ -1.82
SLIT3-205ENST00000519486 RYR3Q15413 4870 aa3.64□□□□□ -1.83
SLIT3-205ENST00000519486 FAT3Q8TDW7 4589 aa3.62□□□□□ -1.83
SLIT3-205ENST00000519486 RYR1P21817 5038 aa3.62□□□□□ -1.83
SLIT3-205ENST00000519486 PKD1P98161 4303 aa3.59□□□□□ -1.84
SLIT3-205ENST00000519486 HERC2O95714 4834 aa3.56□□□□□ -1.84
SLIT3-205ENST00000519486 INE1O15225 51 aa3.55□□□□□ -1.84
SLIT3-205ENST00000519486 EPPK1P58107 5090 aaKnown RBP3.53□□□□□ -1.84
SLIT3-205ENST00000519486 LORP23490 312 aaPredicted RBP3.52□□□□□ -1.85
SLIT3-205ENST00000519486 LRP2P98164 4655 aa3.5□□□□□ -1.85
SLIT3-205ENST00000519486 PCLOQ9Y6V0 5065 aa3.49□□□□□ -1.85
SLIT3-205ENST00000519486 LCE2BO14633 110 aa3.48□□□□□ -1.85
SLIT3-205ENST00000519486 MT1HP80294 61 aa3.47□□□□□ -1.85
SLIT3-205ENST00000519486 KRTAP4-1Q9BYQ7 146 aa3.47□□□□□ -1.85
SLIT3-205ENST00000519486 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
SLIT3-205ENST00000519486 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
SLIT3-205ENST00000519486 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
SLIT3-205ENST00000519486 KRTAP9-2Q9BYQ4 174 aa3.45□□□□□ -1.86
SLIT3-205ENST00000519486 HSPG2P98160 4391 aa3.44□□□□□ -1.86
SLIT3-205ENST00000519486 LCE2CQ5TA81 110 aa3.39□□□□□ -1.87
SLIT3-205ENST00000519486 PKHD1L1Q86WI1 4243 aa3.38□□□□□ -1.87
SLIT3-205ENST00000519486 LCE2AQ5TA79 106 aaPredicted RBP3.38□□□□□ -1.87
SLIT3-205ENST00000519486 LPAP08519 4548 aa3.37□□□□□ -1.87
SLIT3-205ENST00000519486 TNXBP22105 4242 aa3.35□□□□□ -1.87
SLIT3-205ENST00000519486 ABCA13Q86UQ4 5058 aa3.35□□□□□ -1.87
SLIT3-205ENST00000519486 HERC1Q15751 4861 aa3.32□□□□□ -1.88
SLIT3-205ENST00000519486 MT2AP02795 61 aa3.31□□□□□ -1.88
SLIT3-205ENST00000519486 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
SLIT3-205ENST00000519486 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
SLIT3-205ENST00000519486 MT1FP04733 61 aa3.21□□□□□ -1.9
SLIT3-205ENST00000519486 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
SLIT3-205ENST00000519486 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
SLIT3-205ENST00000519486 MUC2Q02817 5179 aa3.18□□□□□ -1.9
SLIT3-205ENST00000519486 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
SLIT3-205ENST00000519486 KRTAP9-7A8MTY7 169 aa3.15□□□□□ -1.9
SLIT3-205ENST00000519486 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.91
SLIT3-205ENST00000519486 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
SLIT3-205ENST00000519486 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
SLIT3-205ENST00000519486 KRTAP19-1Q8IUB9 90 aa3.14□□□□□ -1.91
SLIT3-205ENST00000519486 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
SLIT3-205ENST00000519486 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
SLIT3-205ENST00000519486 SPRR2EP22531 72 aa3.1□□□□□ -1.91
SLIT3-205ENST00000519486 SPRR2BP35325 72 aa3.1□□□□□ -1.91
SLIT3-205ENST00000519486 SPRR2AP35326 72 aa3.1□□□□□ -1.91
SLIT3-205ENST00000519486 MUC17Q685J3 4493 aa3.08□□□□□ -1.92
SLIT3-205ENST00000519486 RNF213Q63HN8 5207 aa3.07□□□□□ -1.92
SLIT3-205ENST00000519486 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
SLIT3-205ENST00000519486 KRTAP9-8Q9BYQ0 159 aa3.06□□□□□ -1.92
SLIT3-205ENST00000519486 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
SLIT3-205ENST00000519486 SPRR2DP22532 72 aa3.02□□□□□ -1.93
SLIT3-205ENST00000519486 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
SLIT3-205ENST00000519486 KRTAP9-3Q9BYQ3 159 aa3.02□□□□□ -1.93
SLIT3-205ENST00000519486 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
SLIT3-205ENST00000519486 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
SLIT3-205ENST00000519486 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
SLIT3-205ENST00000519486 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
SLIT3-205ENST00000519486 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
SLIT3-205ENST00000519486 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
SLIT3-205ENST00000519486 MT1BP07438 61 aa2.95□□□□□ -1.94
SLIT3-205ENST00000519486 MT1XP80297 61 aa2.95□□□□□ -1.94
SLIT3-205ENST00000519486 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.95
SLIT3-205ENST00000519486 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
SLIT3-205ENST00000519486 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms