RNA–Protein interactions for RNA: ENST00000519177.5

SNTB1-203, Transcript of syntrophin beta 1, humanhuman

TSL 1 (best)

Gene SNTB1, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-203ENST00000519177 SPATA8Q6RVD6 105 aa9.54□□□□□ -0.88
SNTB1-203ENST00000519177 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.89
SNTB1-203ENST00000519177 PMAIP1Q13794 54 aa9.5□□□□□ -0.89
SNTB1-203ENST00000519177 MIR22HGQ0VDD5 57 aa9.5□□□□□ -0.89
SNTB1-203ENST00000519177 LRP2P98164 4655 aa9.49□□□□□ -0.89
SNTB1-203ENST00000519177 J3QL48 77 aa9.46□□□□□ -0.89
SNTB1-203ENST00000519177 HERC2O95714 4834 aa9.45□□□□□ -0.9
SNTB1-203ENST00000519177 KRTAP3-3Q9BYR6 98 aa9.45□□□□□ -0.9
SNTB1-203ENST00000519177 LPAP08519 4548 aa9.45□□□□□ -0.9
SNTB1-203ENST00000519177 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
SNTB1-203ENST00000519177 S4R3F8 94 aa9.43□□□□□ -0.9
SNTB1-203ENST00000519177 A6NN06 94 aa9.41□□□□□ -0.9
SNTB1-203ENST00000519177 H1FX-AS1Q4G0G2 97 aa9.4□□□□□ -0.9
SNTB1-203ENST00000519177 A0A1B0GU33 70 aa9.37□□□□□ -0.91
SNTB1-203ENST00000519177 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
SNTB1-203ENST00000519177 SEC61BP60468 96 aaKnown RBP9.34□□□□□ -0.91
SNTB1-203ENST00000519177 H0YAA0 97 aa9.3□□□□□ -0.92
SNTB1-203ENST00000519177 KRTAP10-6P60371 365 aaPredicted RBP9.24□□□□□ -0.93
SNTB1-203ENST00000519177 KTN1-AS1Q86SY8 53 aa9.24□□□□□ -0.93
SNTB1-203ENST00000519177 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
SNTB1-203ENST00000519177 MUC17Q685J3 4493 aa9.2□□□□□ -0.94
SNTB1-203ENST00000519177 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
SNTB1-203ENST00000519177 KRTAP4-1Q9BYQ7 146 aa9.14□□□□□ -0.95
SNTB1-203ENST00000519177 P0C880 135 aa9.09□□□□□ -0.95
SNTB1-203ENST00000519177 ADM2Q7Z4H4 148 aa9.08□□□□□ -0.96
SNTB1-203ENST00000519177 KRTAP13-4Q3LI77 160 aa9.04□□□□□ -0.96
SNTB1-203ENST00000519177 KRTAP19-2Q3LHN2 52 aa8.98□□□□□ -0.97
SNTB1-203ENST00000519177 PCLOQ9Y6V0 5065 aa8.97□□□□□ -0.97
SNTB1-203ENST00000519177 K7ERS5 55 aa8.97□□□□□ -0.97
SNTB1-203ENST00000519177 HMCN2Q8NDA2 5059 aa8.92□□□□□ -0.98
SNTB1-203ENST00000519177 HERC1Q15751 4861 aa8.92□□□□□ -0.98
SNTB1-203ENST00000519177 LCE2DQ5TA82 110 aaPredicted RBP8.91□□□□□ -0.98
SNTB1-203ENST00000519177 A0A0D9SG42 100 aa8.9□□□□□ -0.98
SNTB1-203ENST00000519177 M0QZ58 72 aa8.88□□□□□ -0.99
SNTB1-203ENST00000519177 PRAC1Q96KF2 57 aa8.87□□□□□ -0.99
SNTB1-203ENST00000519177 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
SNTB1-203ENST00000519177 MUC2Q02817 5179 aa8.75□□□□□ -1.01
SNTB1-203ENST00000519177 KRTAP12-1P59990 96 aa8.72□□□□□ -1.01
SNTB1-203ENST00000519177 KRTAP12-2P59991 146 aa8.72□□□□□ -1.01
SNTB1-203ENST00000519177 R4GN34 69 aa8.7□□□□□ -1.02
SNTB1-203ENST00000519177 ROMO1P60602 79 aa8.69□□□□□ -1.02
SNTB1-203ENST00000519177 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
SNTB1-203ENST00000519177 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
SNTB1-203ENST00000519177 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
SNTB1-203ENST00000519177 LINC01554Q52M75 96 aa8.57□□□□□ -1.04
SNTB1-203ENST00000519177 KRTAP25-1Q3LHN0 102 aa8.56□□□□□ -1.04
SNTB1-203ENST00000519177 RNF213Q63HN8 5207 aa8.48□□□□□ -1.05
SNTB1-203ENST00000519177 CRIPTQ9P021 101 aa8.46□□□□□ -1.05
SNTB1-203ENST00000519177 UBR4Q5T4S7 5183 aa8.42□□□□□ -1.06
SNTB1-203ENST00000519177 MT1HP80294 61 aa8.38□□□□□ -1.07
SNTB1-203ENST00000519177 FAT4Q6V0I7 4981 aa8.36□□□□□ -1.07
SNTB1-203ENST00000519177 M0R2T5 61 aa8.32□□□□□ -1.08
SNTB1-203ENST00000519177 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
SNTB1-203ENST00000519177 CAMK2N1Q7Z7J9 78 aa8.2□□□□□ -1.1
SNTB1-203ENST00000519177 SPRR2GQ9BYE4 73 aa8.2□□□□□ -1.1
SNTB1-203ENST00000519177 MT2AP02795 61 aa8.15□□□□□ -1.11
SNTB1-203ENST00000519177 KRTAP19-1Q8IUB9 90 aa8.14□□□□□ -1.11
SNTB1-203ENST00000519177 KRTAP9-8Q9BYQ0 159 aa8.14□□□□□ -1.11
SNTB1-203ENST00000519177 MT1FP04733 61 aa8.11□□□□□ -1.11
SNTB1-203ENST00000519177 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
SNTB1-203ENST00000519177 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
SNTB1-203ENST00000519177 KRTAP19-8Q3LI54 63 aa7.92□□□□□ -1.14
SNTB1-203ENST00000519177 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
SNTB1-203ENST00000519177 TNP1P09430 55 aa7.88□□□□□ -1.15
SNTB1-203ENST00000519177 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
SNTB1-203ENST00000519177 MT1BP07438 61 aa7.79□□□□□ -1.16
SNTB1-203ENST00000519177 KRTAP23-1A1A580 65 aa7.78□□□□□ -1.16
SNTB1-203ENST00000519177 LCE2AQ5TA79 106 aaPredicted RBP7.74□□□□□ -1.17
SNTB1-203ENST00000519177 KRTAP15-1Q3LI76 137 aa7.7□□□□□ -1.18
SNTB1-203ENST00000519177 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
SNTB1-203ENST00000519177 MT1XP80297 61 aa7.63□□□□□ -1.19
SNTB1-203ENST00000519177 LCE2BO14633 110 aa7.54□□□□□ -1.2
SNTB1-203ENST00000519177 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
SNTB1-203ENST00000519177 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.21
SNTB1-203ENST00000519177 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
SNTB1-203ENST00000519177 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
SNTB1-203ENST00000519177 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
SNTB1-203ENST00000519177 NDUFAF8A1L188 74 aa7.28□□□□□ -1.24
SNTB1-203ENST00000519177 USH2AO75445 5202 aa7.26□□□□□ -1.25
SNTB1-203ENST00000519177 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
SNTB1-203ENST00000519177 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
SNTB1-203ENST00000519177 LUZP6Q538Z0 58 aa7.11□□□□□ -1.27
SNTB1-203ENST00000519177 H3BS24 57 aa7.07□□□□□ -1.28
SNTB1-203ENST00000519177 SSPOA2VEC9 5147 aa7.01□□□□□ -1.29
SNTB1-203ENST00000519177 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
SNTB1-203ENST00000519177 KRTAP19-6Q3LI70 58 aa6.96□□□□□ -1.3
SNTB1-203ENST00000519177 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
SNTB1-203ENST00000519177 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
SNTB1-203ENST00000519177 KMT2DO14686 5537 aa6.89□□□□□ -1.31
SNTB1-203ENST00000519177 KRTAP19-7Q3SYF9 63 aa6.8□□□□□ -1.32
SNTB1-203ENST00000519177 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
SNTB1-203ENST00000519177 FSIP2Q5CZC0 6907 aa6.7□□□□□ -1.34
SNTB1-203ENST00000519177 MT1EP04732 61 aa6.65□□□□□ -1.34
SNTB1-203ENST00000519177 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
SNTB1-203ENST00000519177 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
SNTB1-203ENST00000519177 KRTAP4-6Q9BYQ5 205 aa6.61□□□□□ -1.35
SNTB1-203ENST00000519177 MT1LQ93083 61 aa6.58□□□□□ -1.36
SNTB1-203ENST00000519177 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
SNTB1-203ENST00000519177 A0A0A0MQY5 61 aa6.46□□□□□ -1.37
SNTB1-203ENST00000519177 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms