RNA–Protein interactions for RNA: ENST00000518018.1

TRPS1-207, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-207ENST00000518018 FLNAP21333 2647 aaKnown RBP1.62□□□□□ -2.15
TRPS1-207ENST00000518018 DNHD1Q96M86 4753 aa1.62□□□□□ -2.15
TRPS1-207ENST00000518018 CFAP46Q8IYW2 2715 aa1.61□□□□□ -2.15
TRPS1-207ENST00000518018 C9orf92A6NGG3 77 aa1.61□□□□□ -2.15
TRPS1-207ENST00000518018 SONP18583 2426 aaKnown RBP1.6□□□□□ -2.15
TRPS1-207ENST00000518018 LAMA5O15230 3695 aa1.6□□□□□ -2.15
TRPS1-207ENST00000518018 M0QZ58 72 aa1.6□□□□□ -2.15
TRPS1-207ENST00000518018 POLQO75417 2590 aa1.6□□□□□ -2.15
TRPS1-207ENST00000518018 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
TRPS1-207ENST00000518018 CCDC168Q8NDH2 2452 aa1.59□□□□□ -2.16
TRPS1-207ENST00000518018 MTORP42345 2549 aa1.57□□□□□ -2.16
TRPS1-207ENST00000518018 NF1P21359 2839 aa1.57□□□□□ -2.16
TRPS1-207ENST00000518018 NBPF19A0A087WUL8 3843 aa1.56□□□□□ -2.16
TRPS1-207ENST00000518018 C10orf95Q9H7T3 257 aa1.56□□□□□ -2.16
TRPS1-207ENST00000518018 NBEAL2Q6ZNJ1 2754 aa1.56□□□□□ -2.16
TRPS1-207ENST00000518018 F8P00451 2351 aa1.56□□□□□ -2.16
TRPS1-207ENST00000518018 CELSR2Q9HCU4 2923 aa1.56□□□□□ -2.16
TRPS1-207ENST00000518018 SETD2Q9BYW2 2564 aaPredicted RBP1.55□□□□□ -2.16
TRPS1-207ENST00000518018 HIVEP1P15822 2718 aa1.55□□□□□ -2.16
TRPS1-207ENST00000518018 MXRA5Q9NR99 2828 aa1.55□□□□□ -2.16
TRPS1-207ENST00000518018 OTOGQ6ZRI0 2925 aa1.55□□□□□ -2.16
TRPS1-207ENST00000518018 VPS13CQ709C8 3753 aa1.54□□□□□ -2.16
TRPS1-207ENST00000518018 CRYBG3Q68DQ2 2970 aa1.54□□□□□ -2.16
TRPS1-207ENST00000518018 APCP25054 2843 aa1.53□□□□□ -2.16
TRPS1-207ENST00000518018 CSMD2Q7Z408 3487 aa1.53□□□□□ -2.16
TRPS1-207ENST00000518018 AKAP9Q99996 3911 aa1.53□□□□□ -2.17
TRPS1-207ENST00000518018 CENPEQ02224 2701 aa1.53□□□□□ -2.17
TRPS1-207ENST00000518018 ZANQ9Y493 2812 aa1.52□□□□□ -2.17
TRPS1-207ENST00000518018 TENM2Q9NT68 2774 aa1.52□□□□□ -2.17
TRPS1-207ENST00000518018 NIPBLQ6KC79 2804 aaeCLIP1.52□□□□□ -2.17
TRPS1-207ENST00000518018 FLNCQ14315 2725 aa1.52□□□□□ -2.17
TRPS1-207ENST00000518018 ITPR2Q14571 2701 aa1.52□□□□□ -2.17
TRPS1-207ENST00000518018 PDZD2O15018 2839 aa1.51□□□□□ -2.17
TRPS1-207ENST00000518018 ACANP16112 2415 aa1.5□□□□□ -2.17
TRPS1-207ENST00000518018 KRTAP10-4P60372 401 aaPredicted RBP1.5□□□□□ -2.17
TRPS1-207ENST00000518018 NSD1Q96L73 2696 aaPredicted RBP1.49□□□□□ -2.17
TRPS1-207ENST00000518018 ANK3Q12955 4377 aaKnown RBP1.49□□□□□ -2.17
TRPS1-207ENST00000518018 ALMS1Q8TCU4 4167 aa1.49□□□□□ -2.17
TRPS1-207ENST00000518018 ATRQ13535 2644 aa1.49□□□□□ -2.17
TRPS1-207ENST00000518018 CUBNO60494 3623 aa1.48□□□□□ -2.17
TRPS1-207ENST00000518018 DNAH1Q9P2D7 4330 aa1.48□□□□□ -2.17
TRPS1-207ENST00000518018 NBEAL1Q6ZS30 2694 aa1.47□□□□□ -2.17
TRPS1-207ENST00000518018 SMR3BP02814 79 aaPredicted RBP1.47□□□□□ -2.17
TRPS1-207ENST00000518018 TENM3Q9P273 2699 aa1.46□□□□□ -2.18
TRPS1-207ENST00000518018 TNP1P09430 55 aa1.46□□□□□ -2.18
TRPS1-207ENST00000518018 TGP01266 2768 aa1.45□□□□□ -2.18
TRPS1-207ENST00000518018 VWFP04275 2813 aa1.44□□□□□ -2.18
TRPS1-207ENST00000518018 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
TRPS1-207ENST00000518018 STAB2Q8WWQ8 2551 aa1.43□□□□□ -2.18
TRPS1-207ENST00000518018 RYR3Q15413 4870 aa1.43□□□□□ -2.18
TRPS1-207ENST00000518018 TENM1Q9UKZ4 2725 aa1.42□□□□□ -2.18
TRPS1-207ENST00000518018 STAB1Q9NY15 2570 aa1.42□□□□□ -2.18
TRPS1-207ENST00000518018 ZNF469Q96JG9 3925 aaPredicted RBP1.42□□□□□ -2.18
TRPS1-207ENST00000518018 BIRC6Q9NR09 4857 aa1.41□□□□□ -2.18
TRPS1-207ENST00000518018 Q5VSD8 79 aa1.41□□□□□ -2.18
TRPS1-207ENST00000518018 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
TRPS1-207ENST00000518018 EPPK1P58107 5090 aaKnown RBP1.41□□□□□ -2.18
TRPS1-207ENST00000518018 PKD1L1Q8TDX9 2849 aa1.41□□□□□ -2.18
TRPS1-207ENST00000518018 KMT2CQ8NEZ4 4911 aaKnown RBP1.4□□□□□ -2.18
TRPS1-207ENST00000518018 MEGF8Q7Z7M0 2845 aa1.4□□□□□ -2.19
TRPS1-207ENST00000518018 COL6A5A8TX70 2615 aa1.4□□□□□ -2.19
TRPS1-207ENST00000518018 SRRM2Q9UQ35 2752 aaKnown RBP1.4□□□□□ -2.19
TRPS1-207ENST00000518018 HYDINQ4G0P3 5121 aa1.39□□□□□ -2.19
TRPS1-207ENST00000518018 HUWE1Q7Z6Z7 4374 aaKnown RBP1.39□□□□□ -2.19
TRPS1-207ENST00000518018 PCLOQ9Y6V0 5065 aa1.39□□□□□ -2.19
TRPS1-207ENST00000518018 CSMD3Q7Z407 3707 aa1.39□□□□□ -2.19
TRPS1-207ENST00000518018 NOTCH1P46531 2555 aa1.38□□□□□ -2.19
TRPS1-207ENST00000518018 ANK2Q01484 3957 aa1.38□□□□□ -2.19
TRPS1-207ENST00000518018 VPS13DQ5THJ4 4388 aa1.38□□□□□ -2.19
TRPS1-207ENST00000518018 MGAM2Q2M2H8 2515 aa1.37□□□□□ -2.19
TRPS1-207ENST00000518018 DNAH10Q8IVF4 4471 aa1.36□□□□□ -2.19
TRPS1-207ENST00000518018 UBR4Q5T4S7 5183 aa1.36□□□□□ -2.19
TRPS1-207ENST00000518018 TRRAPQ9Y4A5 3859 aa1.36□□□□□ -2.19
TRPS1-207ENST00000518018 DNAH8Q96JB1 4490 aa1.36□□□□□ -2.19
TRPS1-207ENST00000518018 DNAH3Q8TD57 4116 aa1.36□□□□□ -2.19
TRPS1-207ENST00000518018 DNAH9Q9NYC9 4486 aa1.35□□□□□ -2.19
TRPS1-207ENST00000518018 DMBT1Q9UGM3 2413 aaPredicted RBP1.35□□□□□ -2.19
TRPS1-207ENST00000518018 LYSTQ99698 3801 aa1.34□□□□□ -2.2
TRPS1-207ENST00000518018 DYNC2H1Q8NCM8 4307 aaKnown RBP1.33□□□□□ -2.2
TRPS1-207ENST00000518018 FRAS1Q86XX4 4008 aa1.32□□□□□ -2.2
TRPS1-207ENST00000518018 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
TRPS1-207ENST00000518018 DNAH17Q9UFH2 4485 aa1.31□□□□□ -2.2
TRPS1-207ENST00000518018 HERC2O95714 4834 aa1.31□□□□□ -2.2
TRPS1-207ENST00000518018 RYR2Q92736 4967 aa1.31□□□□□ -2.2
TRPS1-207ENST00000518018 CMYA5Q8N3K9 4069 aa1.3□□□□□ -2.2
TRPS1-207ENST00000518018 COL7A1Q02388 2944 aa1.3□□□□□ -2.2
TRPS1-207ENST00000518018 PRKDCP78527 4128 aaKnown RBP1.3□□□□□ -2.2
TRPS1-207ENST00000518018 PLECQ15149 4684 aaKnown RBP1.28□□□□□ -2.2
TRPS1-207ENST00000518018 RYR1P21817 5038 aa1.28□□□□□ -2.2
TRPS1-207ENST00000518018 HECTD4Q9Y4D8 3996 aa1.28□□□□□ -2.21
TRPS1-207ENST00000518018 DNAH2Q9P225 4427 aa1.27□□□□□ -2.21
TRPS1-207ENST00000518018 KMT2AQ03164 3969 aa1.27□□□□□ -2.21
TRPS1-207ENST00000518018 STARD9Q9P2P6 4700 aa1.27□□□□□ -2.21
TRPS1-207ENST00000518018 DNAH7Q8WXX0 4024 aa1.26□□□□□ -2.21
TRPS1-207ENST00000518018 M0R2T5 61 aa1.26□□□□□ -2.21
TRPS1-207ENST00000518018 MT1HL1P0DM35 61 aa1.26□□□□□ -2.21
TRPS1-207ENST00000518018 SACSQ9NZJ4 4579 aa1.26□□□□□ -2.21
TRPS1-207ENST00000518018 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
TRPS1-207ENST00000518018 DNAH6Q9C0G6 4158 aa1.26□□□□□ -2.21
TRPS1-207ENST00000518018 DNAH5Q8TE73 4624 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms