RNA–Protein interactions for RNA: ENST00000517373.1

EBF1-203, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 2,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-203ENST00000517373 VPS13DQ5THJ4 4388 aa4.1□□□□□ -1.75
EBF1-203ENST00000517373 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.76
EBF1-203ENST00000517373 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
EBF1-203ENST00000517373 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
EBF1-203ENST00000517373 DNAH2Q9P225 4427 aa4.06□□□□□ -1.76
EBF1-203ENST00000517373 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
EBF1-203ENST00000517373 SACSQ9NZJ4 4579 aa4.05□□□□□ -1.76
EBF1-203ENST00000517373 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
EBF1-203ENST00000517373 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
EBF1-203ENST00000517373 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
EBF1-203ENST00000517373 S4R3F8 94 aa4.03□□□□□ -1.76
EBF1-203ENST00000517373 Q6ZRN7 208 aaPredicted RBP4.02□□□□□ -1.77
EBF1-203ENST00000517373 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
EBF1-203ENST00000517373 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
EBF1-203ENST00000517373 RYR3Q15413 4870 aa4.01□□□□□ -1.77
EBF1-203ENST00000517373 FRAS1Q86XX4 4008 aa4.01□□□□□ -1.77
EBF1-203ENST00000517373 SPACA4Q8TDM5 124 aa4.01□□□□□ -1.77
EBF1-203ENST00000517373 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
EBF1-203ENST00000517373 RYR2Q92736 4967 aa4□□□□□ -1.77
EBF1-203ENST00000517373 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
EBF1-203ENST00000517373 DNAH17Q9UFH2 4485 aa3.98□□□□□ -1.77
EBF1-203ENST00000517373 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
EBF1-203ENST00000517373 FAT2Q9NYQ8 4349 aa3.97□□□□□ -1.77
EBF1-203ENST00000517373 A0A0D9SG42 100 aa3.97□□□□□ -1.77
EBF1-203ENST00000517373 KRTAP10-2P60368 255 aa3.96□□□□□ -1.78
EBF1-203ENST00000517373 DNAH11Q96DT5 4516 aa3.96□□□□□ -1.78
EBF1-203ENST00000517373 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
EBF1-203ENST00000517373 PKD1P98161 4303 aa3.94□□□□□ -1.78
EBF1-203ENST00000517373 HECTD4Q9Y4D8 3996 aa3.94□□□□□ -1.78
EBF1-203ENST00000517373 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
EBF1-203ENST00000517373 DNAH5Q8TE73 4624 aa3.92□□□□□ -1.78
EBF1-203ENST00000517373 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
EBF1-203ENST00000517373 PKHD1P08F94 4074 aa3.91□□□□□ -1.78
EBF1-203ENST00000517373 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
EBF1-203ENST00000517373 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
EBF1-203ENST00000517373 DNAH8Q96JB1 4490 aa3.9□□□□□ -1.79
EBF1-203ENST00000517373 KRTAP10-1P60331 282 aa3.9□□□□□ -1.79
EBF1-203ENST00000517373 A0A1B0GVY2 172 aa3.88□□□□□ -1.79
EBF1-203ENST00000517373 EPPK1P58107 5090 aaKnown RBP3.88□□□□□ -1.79
EBF1-203ENST00000517373 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
EBF1-203ENST00000517373 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
EBF1-203ENST00000517373 INE1O15225 51 aa3.85□□□□□ -1.79
EBF1-203ENST00000517373 KRTAP13-2Q52LG2 175 aa3.84□□□□□ -1.79
EBF1-203ENST00000517373 SMR3BP02814 79 aaPredicted RBP3.82□□□□□ -1.8
EBF1-203ENST00000517373 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
EBF1-203ENST00000517373 KRTAP4-5Q9BYR2 181 aa3.81□□□□□ -1.8
EBF1-203ENST00000517373 FAT1Q14517 4588 aa3.8□□□□□ -1.8
EBF1-203ENST00000517373 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
EBF1-203ENST00000517373 R4GN34 69 aa3.8□□□□□ -1.8
EBF1-203ENST00000517373 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
EBF1-203ENST00000517373 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
EBF1-203ENST00000517373 M0QZ58 72 aa3.79□□□□□ -1.8
EBF1-203ENST00000517373 DMBT1Q9UGM3 2413 aaPredicted RBP3.79□□□□□ -1.8
EBF1-203ENST00000517373 VPS13BQ7Z7G8 4022 aa3.76□□□□□ -1.81
EBF1-203ENST00000517373 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
EBF1-203ENST00000517373 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
EBF1-203ENST00000517373 HSPG2P98160 4391 aa3.75□□□□□ -1.81
EBF1-203ENST00000517373 RYR1P21817 5038 aa3.74□□□□□ -1.81
EBF1-203ENST00000517373 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.82
EBF1-203ENST00000517373 PCLOQ9Y6V0 5065 aa3.7□□□□□ -1.82
EBF1-203ENST00000517373 HERC2O95714 4834 aa3.7□□□□□ -1.82
EBF1-203ENST00000517373 KRTAP10-8P60410 259 aa3.69□□□□□ -1.82
EBF1-203ENST00000517373 KRTAP1-4P0C5Y4 121 aa3.69□□□□□ -1.82
EBF1-203ENST00000517373 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
EBF1-203ENST00000517373 Q5VSD8 79 aa3.67□□□□□ -1.82
EBF1-203ENST00000517373 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
EBF1-203ENST00000517373 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.82
EBF1-203ENST00000517373 MYCBP2O75592 4640 aa3.63□□□□□ -1.83
EBF1-203ENST00000517373 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
EBF1-203ENST00000517373 C9orf92A6NGG3 77 aa3.6□□□□□ -1.83
EBF1-203ENST00000517373 PKHD1L1Q86WI1 4243 aa3.6□□□□□ -1.83
EBF1-203ENST00000517373 FAT3Q8TDW7 4589 aa3.57□□□□□ -1.84
EBF1-203ENST00000517373 TNXBP22105 4242 aa3.55□□□□□ -1.84
EBF1-203ENST00000517373 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
EBF1-203ENST00000517373 KRTAP9-3Q9BYQ3 159 aa3.51□□□□□ -1.85
EBF1-203ENST00000517373 HERC1Q15751 4861 aa3.47□□□□□ -1.85
EBF1-203ENST00000517373 LPAP08519 4548 aa3.43□□□□□ -1.86
EBF1-203ENST00000517373 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.86
EBF1-203ENST00000517373 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
EBF1-203ENST00000517373 LRP2P98164 4655 aa3.37□□□□□ -1.87
EBF1-203ENST00000517373 TNP1P09430 55 aa3.37□□□□□ -1.87
EBF1-203ENST00000517373 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.88
EBF1-203ENST00000517373 MUC2Q02817 5179 aa3.29□□□□□ -1.88
EBF1-203ENST00000517373 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
EBF1-203ENST00000517373 KRTAP4-1Q9BYQ7 146 aa3.24□□□□□ -1.89
EBF1-203ENST00000517373 KRTAP10-10P60014 251 aa3.19□□□□□ -1.9
EBF1-203ENST00000517373 MUC17Q685J3 4493 aa3.16□□□□□ -1.9
EBF1-203ENST00000517373 FLGP20930 4061 aaPredicted RBP3.15□□□□□ -1.9
EBF1-203ENST00000517373 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
EBF1-203ENST00000517373 KRTAP19-2Q3LHN2 52 aa3.09□□□□□ -1.91
EBF1-203ENST00000517373 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
EBF1-203ENST00000517373 KRTAP10-12P60413 245 aa3.03□□□□□ -1.92
EBF1-203ENST00000517373 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
EBF1-203ENST00000517373 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
EBF1-203ENST00000517373 MT1HP80294 61 aa2.99□□□□□ -1.93
EBF1-203ENST00000517373 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.93
EBF1-203ENST00000517373 M0R2T5 61 aa2.94□□□□□ -1.94
EBF1-203ENST00000517373 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
EBF1-203ENST00000517373 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.94
EBF1-203ENST00000517373 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms