RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 HERC2O95714 4834 aa-0.79□□□□□ -2.54
RNU6-488P-201ENST00000515918 WFDC10BQ8IUB3 73 aa-0.79□□□□□ -2.54
RNU6-488P-201ENST00000515918 FAM208AQ9UK61 1670 aaKnown RBP-0.79□□□□□ -2.54
RNU6-488P-201ENST00000515918 SPTBN5Q9NRC6 3674 aaKnown RBP-0.79□□□□□ -2.54
RNU6-488P-201ENST00000515918 TLN2Q9Y4G6 2542 aa-0.8□□□□□ -2.54
RNU6-488P-201ENST00000515918 PREX2Q70Z35 1606 aa-0.8□□□□□ -2.54
RNU6-488P-201ENST00000515918 USP9YO00507 2555 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-488P-201ENST00000515918 LMO7Q8WWI1 1683 aa-0.81□□□□□ -2.54
RNU6-488P-201ENST00000515918 KRTAP8-1Q8IUC2 63 aa-0.81□□□□□ -2.54
RNU6-488P-201ENST00000515918 RELNP78509 3460 aa-0.82□□□□□ -2.54
RNU6-488P-201ENST00000515918 SMR3BP02814 79 aaPredicted RBP-0.82□□□□□ -2.54
RNU6-488P-201ENST00000515918 MT4P47944 62 aa-0.82□□□□□ -2.54
RNU6-488P-201ENST00000515918 CLPSL2Q6UWE3 100 aa-0.82□□□□□ -2.54
RNU6-488P-201ENST00000515918 ADCY10Q96PN6 1610 aa-0.82□□□□□ -2.54
RNU6-488P-201ENST00000515918 SYNE2Q8WXH0 6885 aaKnown RBP-0.83□□□□□ -2.54
RNU6-488P-201ENST00000515918 DNAH7Q8WXX0 4024 aa-0.83□□□□□ -2.54
RNU6-488P-201ENST00000515918 PLNP26678 52 aa-0.83□□□□□ -2.54
RNU6-488P-201ENST00000515918 M0QZ58 72 aa-0.84□□□□□ -2.54
RNU6-488P-201ENST00000515918 A0A0C4DFX4 3053 aa-0.84□□□□□ -2.54
RNU6-488P-201ENST00000515918 COL12A1Q99715 3063 aa-0.85□□□□□ -2.54
RNU6-488P-201ENST00000515918 NRXN3Q9Y4C0 1643 aa-0.85□□□□□ -2.55
RNU6-488P-201ENST00000515918 DEFB1P60022 68 aa-0.85□□□□□ -2.55
RNU6-488P-201ENST00000515918 ABCA5Q8WWZ7 1642 aa-0.86□□□□□ -2.55
RNU6-488P-201ENST00000515918 USP9XQ93008 2570 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-488P-201ENST00000515918 EPPK1P58107 5090 aaKnown RBP-0.86□□□□□ -2.55
RNU6-488P-201ENST00000515918 A8MTW9 85 aa-0.86□□□□□ -2.55
RNU6-488P-201ENST00000515918 MT1HP80294 61 aa-0.86□□□□□ -2.55
RNU6-488P-201ENST00000515918 RYR1P21817 5038 aa-0.86□□□□□ -2.55
RNU6-488P-201ENST00000515918 TFF3Q07654 80 aa-0.88□□□□□ -2.55
RNU6-488P-201ENST00000515918 MACF1Q9UPN3 7388 aaKnown RBP-0.89□□□□□ -2.55
RNU6-488P-201ENST00000515918 FANCD2Q9BXW9 1451 aa-0.89□□□□□ -2.55
RNU6-488P-201ENST00000515918 ABCC8Q09428 1581 aa-0.89□□□□□ -2.55
RNU6-488P-201ENST00000515918 CMYA5Q8N3K9 4069 aa-0.89□□□□□ -2.55
RNU6-488P-201ENST00000515918 CELSR3Q9NYQ7 3312 aa-0.89□□□□□ -2.55
RNU6-488P-201ENST00000515918 DYNC1H1Q14204 4646 aaKnown RBP-0.91□□□□□ -2.56
RNU6-488P-201ENST00000515918 CMC2Q9NRP2 79 aa-0.92□□□□□ -2.56
RNU6-488P-201ENST00000515918 DNAH10Q8IVF4 4471 aa-0.93□□□□□ -2.56
RNU6-488P-201ENST00000515918 IQGAP1P46940 1657 aa-0.94□□□□□ -2.56
RNU6-488P-201ENST00000515918 LAMA3Q16787 3333 aa-0.94□□□□□ -2.56
RNU6-488P-201ENST00000515918 C5orf42Q9H799 3197 aa-0.95□□□□□ -2.56
RNU6-488P-201ENST00000515918 COL6A5A8TX70 2615 aa-0.95□□□□□ -2.56
RNU6-488P-201ENST00000515918 DNAH17Q9UFH2 4485 aa-0.96□□□□□ -2.56
RNU6-488P-201ENST00000515918 DNHD1Q96M86 4753 aa-0.96□□□□□ -2.56
RNU6-488P-201ENST00000515918 FRYQ5TBA9 3013 aa-0.97□□□□□ -2.56
RNU6-488P-201ENST00000515918 DEFB131AP59861 70 aa-0.99□□□□□ -2.57
RNU6-488P-201ENST00000515918 BIRC6Q9NR09 4857 aa-1□□□□□ -2.57
RNU6-488P-201ENST00000515918 LINC01546A6NGU7 62 aa-1□□□□□ -2.57
RNU6-488P-201ENST00000515918 SMIM2Q9BVW6 85 aa-1□□□□□ -2.57
RNU6-488P-201ENST00000515918 TEX15Q9BXT5 2789 aa-1□□□□□ -2.57
RNU6-488P-201ENST00000515918 NFAT5O94916 1531 aa-1□□□□□ -2.57
RNU6-488P-201ENST00000515918 ITPR1Q14643 2758 aa-1.01□□□□□ -2.57
RNU6-488P-201ENST00000515918 DDX60Q8IY21 1712 aaKnown RBP-1.03□□□□□ -2.58
RNU6-488P-201ENST00000515918 SPTAN1Q13813 2472 aaKnown RBP-1.05□□□□□ -2.58
RNU6-488P-201ENST00000515918 SPART-AS1P0CW21 52 aa-1.06□□□□□ -2.58
RNU6-488P-201ENST00000515918 POLR2KP53803 58 aaKnown RBP-1.07□□□□□ -2.58
RNU6-488P-201ENST00000515918 CSMD1Q96PZ7 3565 aa-1.09□□□□□ -2.58
RNU6-488P-201ENST00000515918 HYDINQ4G0P3 5121 aa-1.1□□□□□ -2.59
RNU6-488P-201ENST00000515918 SNRPGP15A8MWD9 76 aa-1.1□□□□□ -2.59
RNU6-488P-201ENST00000515918 MT1EP04732 61 aa-1.1□□□□□ -2.59
RNU6-488P-201ENST00000515918 MT1XP80297 61 aa-1.1□□□□□ -2.59
RNU6-488P-201ENST00000515918 MGAQ8IWI9 3026 aa-1.1□□□□□ -2.59
RNU6-488P-201ENST00000515918 ADGRG4Q8IZF6 3080 aa-1.11□□□□□ -2.59
RNU6-488P-201ENST00000515918 TRPM2O94759 1503 aa-1.11□□□□□ -2.59
RNU6-488P-201ENST00000515918 RNF213Q63HN8 5207 aa-1.11□□□□□ -2.59
RNU6-488P-201ENST00000515918 CHD7Q9P2D1 2997 aa-1.12□□□□□ -2.59
RNU6-488P-201ENST00000515918 SRCAPQ6ZRS2 3230 aa-1.13□□□□□ -2.59
RNU6-488P-201ENST00000515918 CLTCL1P53675 1640 aa-1.15□□□□□ -2.59
RNU6-488P-201ENST00000515918 LAMA2P24043 3122 aaKnown RBP-1.18□□□□□ -2.6
RNU6-488P-201ENST00000515918 NDUFA1O15239 70 aa-1.18□□□□□ -2.6
RNU6-488P-201ENST00000515918 MT1LQ93083 61 aa-1.18□□□□□ -2.6
RNU6-488P-201ENST00000515918 DNAH5Q8TE73 4624 aa-1.19□□□□□ -2.6
RNU6-488P-201ENST00000515918 LRBAP50851 2863 aa-1.19□□□□□ -2.6
RNU6-488P-201ENST00000515918 MYO9AB2RTY4 2548 aa-1.19□□□□□ -2.6
RNU6-488P-201ENST00000515918 TRRAPQ9Y4A5 3859 aa-1.21□□□□□ -2.6
RNU6-488P-201ENST00000515918 ZFHX4Q86UP3 3567 aa-1.21□□□□□ -2.6
RNU6-488P-201ENST00000515918 NIPBLQ6KC79 2804 aaeCLIP-1.22□□□□□ -2.61
RNU6-488P-201ENST00000515918 RYR2Q92736 4967 aa-1.23□□□□□ -2.61
RNU6-488P-201ENST00000515918 DOPEY1Q5JWR5 2465 aa-1.25□□□□□ -2.61
RNU6-488P-201ENST00000515918 CRYBG3Q68DQ2 2970 aa-1.28□□□□□ -2.61
RNU6-488P-201ENST00000515918 LEAP2Q969E1 77 aa-1.28□□□□□ -2.61
RNU6-488P-201ENST00000515918 CFAP46Q8IYW2 2715 aa-1.29□□□□□ -2.62
RNU6-488P-201ENST00000515918 RYR3Q15413 4870 aa-1.29□□□□□ -2.62
RNU6-488P-201ENST00000515918 KIAA1109Q2LD37 5005 aa-1.3□□□□□ -2.62
RNU6-488P-201ENST00000515918 NEBP20929 6669 aa-1.31□□□□□ -2.62
RNU6-488P-201ENST00000515918 EYSQ5T1H1 3165 aa-1.31□□□□□ -2.62
RNU6-488P-201ENST00000515918 IQGAP2Q13576 1575 aa-1.32□□□□□ -2.62
RNU6-488P-201ENST00000515918 CSMD2Q7Z408 3487 aa-1.36□□□□□ -2.63
RNU6-488P-201ENST00000515918 MT1GP13640 62 aa-1.37□□□□□ -2.63
RNU6-488P-201ENST00000515918 TOMM5Q8N4H5 51 aa-1.39□□□□□ -2.63
RNU6-488P-201ENST00000515918 CEP295Q9C0D2 2601 aa-1.4□□□□□ -2.63
RNU6-488P-201ENST00000515918 DMXL2Q8TDJ6 3036 aa-1.41□□□□□ -2.63
RNU6-488P-201ENST00000515918 SMG1Q96Q15 3661 aaKnown RBP-1.41□□□□□ -2.63
RNU6-488P-201ENST00000515918 MT1HL1P0DM35 61 aa-1.43□□□□□ -2.64
RNU6-488P-201ENST00000515918 DEFB4AO15263 64 aa-1.44□□□□□ -2.64
RNU6-488P-201ENST00000515918 DEFB136Q30KP8 78 aa-1.45□□□□□ -2.64
RNU6-488P-201ENST00000515918 ATP7AQ04656 1500 aa-1.45□□□□□ -2.64
RNU6-488P-201ENST00000515918 TLN1Q9Y490 2541 aaKnown RBP-1.49□□□□□ -2.65
RNU6-488P-201ENST00000515918 MT1MQ8N339 61 aa-1.51□□□□□ -2.65
RNU6-488P-201ENST00000515918 VPS13CQ709C8 3753 aa-1.51□□□□□ -2.65
RNU6-488P-201ENST00000515918 MT2AP02795 61 aa-1.52□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms