RNA–Protein interactions for RNA: ENST00000514515.5

NREP-222, Transcript of neuronal regeneration related protein, human

TSL 1 (best)

Gene NREP, Length 3,564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NREP-222	ENST00000514515	SPINT4	Q6UDR6	99 aa		3.36	□□□□□ -1.87
NREP-222	ENST00000514515	RPS29	P62273	56 aa	Known RBP	3.35	□□□□□ -1.87
NREP-222	ENST00000514515	RPL37	P61927	97 aa	Known RBP	3.34	□□□□□ -1.88
NREP-222	ENST00000514515	FAT2	Q9NYQ8	4349 aa		3.31	□□□□□ -1.88
NREP-222	ENST00000514515	FAT1	Q14517	4588 aa		3.31	□□□□□ -1.88
NREP-222	ENST00000514515	KRTAP9-2	Q9BYQ4	174 aa		3.31	□□□□□ -1.88
NREP-222	ENST00000514515	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.3	□□□□□ -1.88
NREP-222	ENST00000514515	HYDIN	Q4G0P3	5121 aa		3.29	□□□□□ -1.88
NREP-222	ENST00000514515	C10orf95	Q9H7T3	257 aa		3.29	□□□□□ -1.88
NREP-222	ENST00000514515	PKHD1	P08F94	4074 aa		3.28	□□□□□ -1.88
NREP-222	ENST00000514515	PKD1	P98161	4303 aa		3.28	□□□□□ -1.88
NREP-222	ENST00000514515	KRTAP9-6	A0A140TA67	174 aa		3.27	□□□□□ -1.89
NREP-222	ENST00000514515		P0C880	135 aa		3.27	□□□□□ -1.89
NREP-222	ENST00000514515	KRTAP13-4	Q3LI77	160 aa		3.27	□□□□□ -1.89
NREP-222	ENST00000514515		S4R3F8	94 aa		3.27	□□□□□ -1.89
NREP-222	ENST00000514515	KRTAP4-12	Q9BQ66	201 aa		3.27	□□□□□ -1.89
NREP-222	ENST00000514515	BIRC6	Q9NR09	4857 aa		3.26	□□□□□ -1.89
NREP-222	ENST00000514515	KRTAP10-6	P60371	365 aa	Predicted RBP	3.26	□□□□□ -1.89
NREP-222	ENST00000514515	SACS	Q9NZJ4	4579 aa		3.26	□□□□□ -1.89
NREP-222	ENST00000514515	TPRXL	Q17RH7	258 aa		3.25	□□□□□ -1.89
NREP-222	ENST00000514515	DYNC1H1	Q14204	4646 aa	Known RBP	3.23	□□□□□ -1.89
NREP-222	ENST00000514515	RYR2	Q92736	4967 aa		3.23	□□□□□ -1.89
NREP-222	ENST00000514515	MYCBP2	O75592	4640 aa		3.23	□□□□□ -1.89
NREP-222	ENST00000514515		A0A0A0MQY5	61 aa		3.22	□□□□□ -1.89
NREP-222	ENST00000514515	NDUFAF8	A1L188	74 aa		3.22	□□□□□ -1.89
NREP-222	ENST00000514515	KRTAP10-8	P60410	259 aa		3.22	□□□□□ -1.89
NREP-222	ENST00000514515	KRTAP19-1	Q8IUB9	90 aa		3.2	□□□□□ -1.9
NREP-222	ENST00000514515	KRTAP12-2	P59991	146 aa		3.2	□□□□□ -1.9
NREP-222	ENST00000514515	LCE3B	Q5TA77	95 aa		3.19	□□□□□ -1.9
NREP-222	ENST00000514515	KRTAP10-4	P60372	401 aa	Predicted RBP	3.18	□□□□□ -1.9
NREP-222	ENST00000514515	RYR3	Q15413	4870 aa		3.18	□□□□□ -1.9
NREP-222	ENST00000514515	LRP1	Q07954	4544 aa	Known RBP	3.16	□□□□□ -1.9
NREP-222	ENST00000514515	HERC2	O95714	4834 aa		3.15	□□□□□ -1.9
NREP-222	ENST00000514515		A0A1B0GVY2	172 aa		3.15	□□□□□ -1.91
NREP-222	ENST00000514515	KRTAP12-1	P59990	96 aa		3.14	□□□□□ -1.91
NREP-222	ENST00000514515		Q5VSD8	79 aa		3.14	□□□□□ -1.91
NREP-222	ENST00000514515	KRTAP9-9	Q9BYP9	154 aa		3.14	□□□□□ -1.91
NREP-222	ENST00000514515	KRTAP9-4	Q9BYQ2	154 aa		3.14	□□□□□ -1.91
NREP-222	ENST00000514515	PKHD1L1	Q86WI1	4243 aa		3.14	□□□□□ -1.91
NREP-222	ENST00000514515	APOB	P04114	4563 aa	Known RBP	3.14	□□□□□ -1.91
NREP-222	ENST00000514515	HSPG2	P98160	4391 aa		3.13	□□□□□ -1.91
NREP-222	ENST00000514515	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.13	□□□□□ -1.91
NREP-222	ENST00000514515	FAT3	Q8TDW7	4589 aa		3.12	□□□□□ -1.91
NREP-222	ENST00000514515		M0QZ58	72 aa		3.12	□□□□□ -1.91
NREP-222	ENST00000514515	KRTAP15-1	Q3LI76	137 aa		3.12	□□□□□ -1.91
NREP-222	ENST00000514515		R4GN34	69 aa		3.1	□□□□□ -1.91
NREP-222	ENST00000514515	KRTAP4-8	A0A0G2JLE6	195 aa		3.1	□□□□□ -1.91
NREP-222	ENST00000514515	KRTAP17-1	Q9BYP8	105 aa		3.06	□□□□□ -1.92
NREP-222	ENST00000514515	TNXB	P22105	4242 aa		3.04	□□□□□ -1.92
NREP-222	ENST00000514515	EPPK1	P58107	5090 aa	Known RBP	3.03	□□□□□ -1.92
NREP-222	ENST00000514515	LPA	P08519	4548 aa		3.03	□□□□□ -1.92
NREP-222	ENST00000514515	LRP2	P98164	4655 aa		3.02	□□□□□ -1.93
NREP-222	ENST00000514515	LCE1D	Q5T752	114 aa		3.02	□□□□□ -1.93
NREP-222	ENST00000514515	PLAC4	Q8WY50	150 aa		3.01	□□□□□ -1.93
NREP-222	ENST00000514515	CAMK2N1	Q7Z7J9	78 aa		3	□□□□□ -1.93
NREP-222	ENST00000514515	KRTAP4-7	Q9BYR0	210 aa		3	□□□□□ -1.93
NREP-222	ENST00000514515	MT1HL1	P0DM35	61 aa		2.99	□□□□□ -1.93
NREP-222	ENST00000514515	LUZP6	Q538Z0	58 aa		2.98	□□□□□ -1.93
NREP-222	ENST00000514515	KRTAP19-4	Q3LI73	84 aa		2.97	□□□□□ -1.93
NREP-222	ENST00000514515	KIAA1109	Q2LD37	5005 aa		2.96	□□□□□ -1.94
NREP-222	ENST00000514515	RYR1	P21817	5038 aa		2.95	□□□□□ -1.94
NREP-222	ENST00000514515	KRTAP4-9	Q9BYQ8	210 aa		2.94	□□□□□ -1.94
NREP-222	ENST00000514515	PCLO	Q9Y6V0	5065 aa		2.93	□□□□□ -1.94
NREP-222	ENST00000514515	SEC61B	P60468	96 aa	Known RBP	2.93	□□□□□ -1.94
NREP-222	ENST00000514515	LCE4A	Q5TA78	99 aa		2.89	□□□□□ -1.95
NREP-222	ENST00000514515	PP632	Q6XCG6	107 aa		2.88	□□□□□ -1.95
NREP-222	ENST00000514515	KRTAP4-2	Q9BYR5	136 aa		2.86	□□□□□ -1.95
NREP-222	ENST00000514515	ABCA13	Q86UQ4	5058 aa		2.85	□□□□□ -1.95
NREP-222	ENST00000514515	KRTAP9-7	A8MTY7	169 aa		2.84	□□□□□ -1.95
NREP-222	ENST00000514515	KRTAP4-1	Q9BYQ7	146 aa		2.84	□□□□□ -1.96
NREP-222	ENST00000514515	KRTAP4-5	Q9BYR2	181 aa		2.84	□□□□□ -1.96
NREP-222	ENST00000514515	TNP1	P09430	55 aa		2.83	□□□□□ -1.96
NREP-222	ENST00000514515	KRTAP4-11	Q9BYQ6	195 aa		2.83	□□□□□ -1.96
NREP-222	ENST00000514515	LCE5A	Q5TCM9	118 aa		2.81	□□□□□ -1.96
NREP-222	ENST00000514515	MUC2	Q02817	5179 aa		2.79	□□□□□ -1.96
NREP-222	ENST00000514515	KRTAP9-3	Q9BYQ3	159 aa		2.79	□□□□□ -1.96
NREP-222	ENST00000514515	MUC17	Q685J3	4493 aa		2.76	□□□□□ -1.97
NREP-222	ENST00000514515		M0R2T5	61 aa		2.72	□□□□□ -1.97
NREP-222	ENST00000514515	KRTAP19-2	Q3LHN2	52 aa		2.7	□□□□□ -1.98
NREP-222	ENST00000514515	HMCN2	Q8NDA2	5059 aa		2.69	□□□□□ -1.98
NREP-222	ENST00000514515	FLG	P20930	4061 aa	Predicted RBP	2.67	□□□□□ -1.98
NREP-222	ENST00000514515	KRTAP23-1	A1A580	65 aa		2.66	□□□□□ -1.98
NREP-222	ENST00000514515	FAT4	Q6V0I7	4981 aa		2.65	□□□□□ -1.99
NREP-222	ENST00000514515	LCE3A	Q5TA76	89 aa		2.64	□□□□□ -1.99
NREP-222	ENST00000514515	SPRR5	A0A1B0GTR4	108 aa		2.63	□□□□□ -1.99
NREP-222	ENST00000514515	HERC1	Q15751	4861 aa		2.62	□□□□□ -1.99
NREP-222	ENST00000514515	KRTAP10-10	P60014	251 aa		2.61	□□□□□ -1.99
NREP-222	ENST00000514515	SPRR2G	Q9BYE4	73 aa		2.57	□□□□□ -2
NREP-222	ENST00000514515	PRO2289	Q9P1D8	64 aa		2.54	□□□□□ -2
NREP-222	ENST00000514515	RNF213	Q63HN8	5207 aa		2.53	□□□□□ -2
NREP-222	ENST00000514515	KRTAP5-3	Q6L8H2	238 aa		2.51	□□□□□ -2.01
NREP-222	ENST00000514515	MT1F	P04733	61 aa		2.51	□□□□□ -2.01
NREP-222	ENST00000514515	KRTAP12-3	P60328	96 aa		2.51	□□□□□ -2.01
NREP-222	ENST00000514515	KRTAP8-1	Q8IUC2	63 aa		2.5	□□□□□ -2.01
NREP-222	ENST00000514515	MT2A	P02795	61 aa		2.5	□□□□□ -2.01
NREP-222	ENST00000514515	MT1H	P80294	61 aa		2.5	□□□□□ -2.01
NREP-222	ENST00000514515	KRTAP10-12	P60413	245 aa		2.49	□□□□□ -2.01
NREP-222	ENST00000514515	INE1	O15225	51 aa		2.49	□□□□□ -2.01
NREP-222	ENST00000514515	UBR4	Q5T4S7	5183 aa		2.46	□□□□□ -2.02
NREP-222	ENST00000514515	KRTAP9-8	Q9BYQ0	159 aa		2.45	□□□□□ -2.02

Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms