RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 PCOTHQ58A44 107 aa1.44□□□□□ -2.18
CALCOCO2-223ENST00000514267 ATP11AUNQ6ZP68 121 aa1.44□□□□□ -2.18
CALCOCO2-223ENST00000514267 KRTAP13-1Q8IUC0 172 aa1.44□□□□□ -2.18
CALCOCO2-223ENST00000514267 TENM3Q9P273 2699 aa1.44□□□□□ -2.18
CALCOCO2-223ENST00000514267 COL6A5A8TX70 2615 aa1.44□□□□□ -2.18
CALCOCO2-223ENST00000514267 NOTCH1P46531 2555 aa1.44□□□□□ -2.18
CALCOCO2-223ENST00000514267 A0A087WSZ3 146 aa1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 A0A087WTM6 91 aa1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 HCG22E2RYF7 251 aa1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 NDUFB1O75438 58 aa1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 MIR22HGQ0VDD5 57 aa1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 Q6ZRN7 208 aaPredicted RBP1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 COA5Q86WW8 74 aa1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 WFDC13Q8IUB5 93 aa1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 NBEAL1Q6ZS30 2694 aa1.43□□□□□ -2.18
CALCOCO2-223ENST00000514267 K7EQZ3 153 aa1.42□□□□□ -2.18
CALCOCO2-223ENST00000514267 ATP5EP56381 51 aaPredicted RBP1.42□□□□□ -2.18
CALCOCO2-223ENST00000514267 RPL37AP61513 92 aaKnown RBP1.42□□□□□ -2.18
CALCOCO2-223ENST00000514267 SPRR4Q96PI1 79 aa1.42□□□□□ -2.18
CALCOCO2-223ENST00000514267 CYSTM1Q9H1C7 97 aa1.42□□□□□ -2.18
CALCOCO2-223ENST00000514267 KMT2CQ8NEZ4 4911 aaKnown RBP1.41□□□□□ -2.18
CALCOCO2-223ENST00000514267 FRAS1Q86XX4 4008 aa1.41□□□□□ -2.18
CALCOCO2-223ENST00000514267 SPRR1BP22528 89 aa1.41□□□□□ -2.18
CALCOCO2-223ENST00000514267 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
CALCOCO2-223ENST00000514267 KLKP1Q107X0 134 aa1.41□□□□□ -2.18
CALCOCO2-223ENST00000514267 FP248Q71RG6 208 aaPredicted RBP1.41□□□□□ -2.18
CALCOCO2-223ENST00000514267 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
CALCOCO2-223ENST00000514267 FAT2Q9NYQ8 4349 aa1.41□□□□□ -2.18
CALCOCO2-223ENST00000514267 KMT2AQ03164 3969 aa1.4□□□□□ -2.18
CALCOCO2-223ENST00000514267 MGAM2Q2M2H8 2515 aa1.4□□□□□ -2.18
CALCOCO2-223ENST00000514267 H0Y9P7 68 aa1.4□□□□□ -2.19
CALCOCO2-223ENST00000514267 H7BZZ5 65 aa1.4□□□□□ -2.19
CALCOCO2-223ENST00000514267 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
CALCOCO2-223ENST00000514267 SPINK6Q6UWN8 80 aa1.4□□□□□ -2.19
CALCOCO2-223ENST00000514267 LINC00208Q96KT6 92 aa1.4□□□□□ -2.19
CALCOCO2-223ENST00000514267 SACSQ9NZJ4 4579 aa1.4□□□□□ -2.19
CALCOCO2-223ENST00000514267 EPPK1P58107 5090 aaKnown RBP1.39□□□□□ -2.19
CALCOCO2-223ENST00000514267 HYDINQ4G0P3 5121 aa1.39□□□□□ -2.19
CALCOCO2-223ENST00000514267 KRTAP12-1P59990 96 aa1.39□□□□□ -2.19
CALCOCO2-223ENST00000514267 LINC00472Q9H8W2 130 aa1.39□□□□□ -2.19
CALCOCO2-223ENST00000514267 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
CALCOCO2-223ENST00000514267 PKD1P98161 4303 aa1.39□□□□□ -2.19
CALCOCO2-223ENST00000514267 RYR1P21817 5038 aa1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 COL7A1Q02388 2944 aa1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 SPTSSBQ8NFR3 76 aa1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 LIMD2Q9BT23 127 aa1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 TP53AIP1Q9HCN2 124 aa1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 DYNC1H1Q14204 4646 aaKnown RBP1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 LRP1BQ9NZR2 4599 aa1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 STAB2Q8WWQ8 2551 aa1.38□□□□□ -2.19
CALCOCO2-223ENST00000514267 TRAV22A0A0B4J277 110 aa1.37□□□□□ -2.19
CALCOCO2-223ENST00000514267 SSBP3-AS1Q7Z2R9 100 aa1.37□□□□□ -2.19
CALCOCO2-223ENST00000514267 MRPL34Q9BQ48 92 aaKnown RBP1.37□□□□□ -2.19
CALCOCO2-223ENST00000514267 CDC42SE1Q9NRR8 79 aa1.37□□□□□ -2.19
CALCOCO2-223ENST00000514267 TENM2Q9NT68 2774 aa1.37□□□□□ -2.19
CALCOCO2-223ENST00000514267 MMP24-AS1A0A0U1RRL7 71 aa1.36□□□□□ -2.19
CALCOCO2-223ENST00000514267 LCE6AA0A183 80 aa1.36□□□□□ -2.19
CALCOCO2-223ENST00000514267 CSAG1Q6PB30 78 aa1.36□□□□□ -2.19
CALCOCO2-223ENST00000514267 VPS13BQ7Z7G8 4022 aa1.35□□□□□ -2.19
CALCOCO2-223ENST00000514267 APOBP04114 4563 aaKnown RBP1.35□□□□□ -2.19
CALCOCO2-223ENST00000514267 Q96NJ1 140 aa1.35□□□□□ -2.19
CALCOCO2-223ENST00000514267 MEGF8Q7Z7M0 2845 aa1.35□□□□□ -2.19
CALCOCO2-223ENST00000514267 PKHD1L1Q86WI1 4243 aa1.35□□□□□ -2.19
CALCOCO2-223ENST00000514267 SRRM2Q9UQ35 2752 aaKnown RBP1.34□□□□□ -2.19
CALCOCO2-223ENST00000514267 RYR2Q92736 4967 aa1.34□□□□□ -2.19
CALCOCO2-223ENST00000514267 LOC101927531A0A1B0GV80 90 aa1.34□□□□□ -2.19
CALCOCO2-223ENST00000514267 CHKB-CPT1BH3BT56 60 aa1.34□□□□□ -2.19
CALCOCO2-223ENST00000514267 SMR3BP02814 79 aaPredicted RBP1.34□□□□□ -2.19
CALCOCO2-223ENST00000514267 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
CALCOCO2-223ENST00000514267 CYP4F30PQ9H0H9 118 aa1.34□□□□□ -2.19
CALCOCO2-223ENST00000514267 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.2
CALCOCO2-223ENST00000514267 HERC2O95714 4834 aa1.33□□□□□ -2.2
CALCOCO2-223ENST00000514267 DMAC1Q96GE9 116 aa1.33□□□□□ -2.2
CALCOCO2-223ENST00000514267 KIAA1109Q2LD37 5005 aa1.33□□□□□ -2.2
CALCOCO2-223ENST00000514267 FAT1Q14517 4588 aa1.33□□□□□ -2.2
CALCOCO2-223ENST00000514267 SPINK1P00995 79 aa1.32□□□□□ -2.2
CALCOCO2-223ENST00000514267 ACYP2P14621 99 aa1.32□□□□□ -2.2
CALCOCO2-223ENST00000514267 SPAG11AQ6PDA7 123 aa1.32□□□□□ -2.2
CALCOCO2-223ENST00000514267 TGP01266 2768 aa1.32□□□□□ -2.2
CALCOCO2-223ENST00000514267 PKHD1P08F94 4074 aa1.32□□□□□ -2.2
CALCOCO2-223ENST00000514267 FAT3Q8TDW7 4589 aa1.32□□□□□ -2.2
CALCOCO2-223ENST00000514267 Q6ZSA8 131 aa1.31□□□□□ -2.2
CALCOCO2-223ENST00000514267 HSPG2P98160 4391 aa1.31□□□□□ -2.2
CALCOCO2-223ENST00000514267 C9orf92A6NGG3 77 aa1.3□□□□□ -2.2
CALCOCO2-223ENST00000514267 Q5VV11 94 aa1.29□□□□□ -2.2
CALCOCO2-223ENST00000514267 TNXBP22105 4242 aa1.29□□□□□ -2.2
CALCOCO2-223ENST00000514267 A0A1B0GU69 56 aa1.28□□□□□ -2.2
CALCOCO2-223ENST00000514267 RPS29P62273 56 aaKnown RBP1.28□□□□□ -2.2
CALCOCO2-223ENST00000514267 LINC01558Q9Y6Z2 57 aa1.28□□□□□ -2.2
CALCOCO2-223ENST00000514267 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
CALCOCO2-223ENST00000514267 INE1O15225 51 aa1.26□□□□□ -2.21
CALCOCO2-223ENST00000514267 SPINK7P58062 85 aa1.26□□□□□ -2.21
CALCOCO2-223ENST00000514267 Q5VSD8 79 aa1.26□□□□□ -2.21
CALCOCO2-223ENST00000514267 ABCA13Q86UQ4 5058 aa1.26□□□□□ -2.21
CALCOCO2-223ENST00000514267 MUC2Q02817 5179 aa1.25□□□□□ -2.21
CALCOCO2-223ENST00000514267 HERC1Q15751 4861 aa1.24□□□□□ -2.21
CALCOCO2-223ENST00000514267 UQCR11O14957 56 aa1.24□□□□□ -2.21
CALCOCO2-223ENST00000514267 LRP1Q07954 4544 aaKnown RBP1.24□□□□□ -2.21
CALCOCO2-223ENST00000514267 KRTAP10-4P60372 401 aaPredicted RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms