RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
PRDM16-208ENST00000514189 KRTAP10-8P60410 259 aa6.65□□□□□ -1.34
PRDM16-208ENST00000514189 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
PRDM16-208ENST00000514189 DNAH5Q8TE73 4624 aa6.58□□□□□ -1.36
PRDM16-208ENST00000514189 DNAH11Q96DT5 4516 aa6.57□□□□□ -1.36
PRDM16-208ENST00000514189 PKD1P98161 4303 aa6.55□□□□□ -1.36
PRDM16-208ENST00000514189 TNP1P09430 55 aa6.54□□□□□ -1.36
PRDM16-208ENST00000514189 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
PRDM16-208ENST00000514189 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
PRDM16-208ENST00000514189 HYDINQ4G0P3 5121 aa6.47□□□□□ -1.37
PRDM16-208ENST00000514189 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
PRDM16-208ENST00000514189 TPRXLQ17RH7 258 aa6.46□□□□□ -1.37
PRDM16-208ENST00000514189 LRP1BQ9NZR2 4599 aa6.42□□□□□ -1.38
PRDM16-208ENST00000514189 VPS13BQ7Z7G8 4022 aa6.39□□□□□ -1.39
PRDM16-208ENST00000514189 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
PRDM16-208ENST00000514189 KRTAP10-6P60371 365 aaPredicted RBP6.37□□□□□ -1.39
PRDM16-208ENST00000514189 KRTAP10-10P60014 251 aa6.35□□□□□ -1.39
PRDM16-208ENST00000514189 PKHD1P08F94 4074 aa6.35□□□□□ -1.39
PRDM16-208ENST00000514189 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
PRDM16-208ENST00000514189 SACSQ9NZJ4 4579 aa6.24□□□□□ -1.41
PRDM16-208ENST00000514189 FAT1Q14517 4588 aa6.23□□□□□ -1.41
PRDM16-208ENST00000514189 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.42
PRDM16-208ENST00000514189 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
PRDM16-208ENST00000514189 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
PRDM16-208ENST00000514189 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
PRDM16-208ENST00000514189 PKHD1L1Q86WI1 4243 aa6.17□□□□□ -1.42
PRDM16-208ENST00000514189 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
PRDM16-208ENST00000514189 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
PRDM16-208ENST00000514189 KMT2CQ8NEZ4 4911 aaKnown RBP6.11□□□□□ -1.43
PRDM16-208ENST00000514189 APOBP04114 4563 aaKnown RBP6.09□□□□□ -1.43
PRDM16-208ENST00000514189 DYNC1H1Q14204 4646 aaKnown RBP6.07□□□□□ -1.44
PRDM16-208ENST00000514189 RYR1P21817 5038 aa5.99□□□□□ -1.45
PRDM16-208ENST00000514189 RYR2Q92736 4967 aa5.99□□□□□ -1.45
PRDM16-208ENST00000514189 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
PRDM16-208ENST00000514189 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
PRDM16-208ENST00000514189 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
PRDM16-208ENST00000514189 HSPG2P98160 4391 aa5.94□□□□□ -1.46
PRDM16-208ENST00000514189 RYR3Q15413 4870 aa5.93□□□□□ -1.46
PRDM16-208ENST00000514189 TNXBP22105 4242 aa5.92□□□□□ -1.46
PRDM16-208ENST00000514189 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
PRDM16-208ENST00000514189 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
PRDM16-208ENST00000514189 LRP1Q07954 4544 aaKnown RBP5.86□□□□□ -1.47
PRDM16-208ENST00000514189 LPAP08519 4548 aa5.79□□□□□ -1.48
PRDM16-208ENST00000514189 KRTAP17-1Q9BYP8 105 aa5.76□□□□□ -1.49
PRDM16-208ENST00000514189 EPPK1P58107 5090 aaKnown RBP5.73□□□□□ -1.49
PRDM16-208ENST00000514189 KRTAP4-1Q9BYQ7 146 aa5.69□□□□□ -1.5
PRDM16-208ENST00000514189 BIRC6Q9NR09 4857 aa5.65□□□□□ -1.51
PRDM16-208ENST00000514189 LRP2P98164 4655 aa5.63□□□□□ -1.51
PRDM16-208ENST00000514189 HERC2O95714 4834 aa5.57□□□□□ -1.52
PRDM16-208ENST00000514189 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
PRDM16-208ENST00000514189 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
PRDM16-208ENST00000514189 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
PRDM16-208ENST00000514189 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
PRDM16-208ENST00000514189 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
PRDM16-208ENST00000514189 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
PRDM16-208ENST00000514189 PCLOQ9Y6V0 5065 aa5.37□□□□□ -1.55
PRDM16-208ENST00000514189 MT1HP80294 61 aa5.24□□□□□ -1.57
PRDM16-208ENST00000514189 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
PRDM16-208ENST00000514189 MT2AP02795 61 aa5.24□□□□□ -1.57
PRDM16-208ENST00000514189 MT1FP04733 61 aa5.22□□□□□ -1.57
PRDM16-208ENST00000514189 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.57
PRDM16-208ENST00000514189 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
PRDM16-208ENST00000514189 MUC2Q02817 5179 aa5.2□□□□□ -1.58
PRDM16-208ENST00000514189 HERC1Q15751 4861 aa5.19□□□□□ -1.58
PRDM16-208ENST00000514189 INE1O15225 51 aa5.18□□□□□ -1.58
PRDM16-208ENST00000514189 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
PRDM16-208ENST00000514189 FLGP20930 4061 aaPredicted RBP5.15□□□□□ -1.58
PRDM16-208ENST00000514189 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
PRDM16-208ENST00000514189 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
PRDM16-208ENST00000514189 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
PRDM16-208ENST00000514189 UBR4Q5T4S7 5183 aa5.04□□□□□ -1.6
PRDM16-208ENST00000514189 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
PRDM16-208ENST00000514189 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
PRDM16-208ENST00000514189 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
PRDM16-208ENST00000514189 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
PRDM16-208ENST00000514189 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
PRDM16-208ENST00000514189 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
PRDM16-208ENST00000514189 LCE2CQ5TA81 110 aa4.98□□□□□ -1.61
PRDM16-208ENST00000514189 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
PRDM16-208ENST00000514189 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
PRDM16-208ENST00000514189 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
PRDM16-208ENST00000514189 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
PRDM16-208ENST00000514189 MT1XP80297 61 aa4.83□□□□□ -1.64
PRDM16-208ENST00000514189 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
PRDM16-208ENST00000514189 MT1BP07438 61 aa4.8□□□□□ -1.64
PRDM16-208ENST00000514189 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
PRDM16-208ENST00000514189 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
PRDM16-208ENST00000514189 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
PRDM16-208ENST00000514189 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
PRDM16-208ENST00000514189 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
PRDM16-208ENST00000514189 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
PRDM16-208ENST00000514189 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
PRDM16-208ENST00000514189 MT1GP13640 62 aa4.59□□□□□ -1.68
PRDM16-208ENST00000514189 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
PRDM16-208ENST00000514189 LCE2BO14633 110 aa4.55□□□□□ -1.68
PRDM16-208ENST00000514189 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
PRDM16-208ENST00000514189 USH2AO75445 5202 aa4.5□□□□□ -1.69
PRDM16-208ENST00000514189 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
PRDM16-208ENST00000514189 KMT2DO14686 5537 aa4.41□□□□□ -1.7
PRDM16-208ENST00000514189 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms