RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	LOC101927531	A0A1B0GV80	90 aa		5.52	□□□□□ -1.53
UBE2D3-231	ENST00000513098	TRAV22	A0A0B4J277	110 aa		5.51	□□□□□ -1.53
UBE2D3-231	ENST00000513098		A0A087WVE0	104 aa		5.49	□□□□□ -1.53
UBE2D3-231	ENST00000513098	ACYP1	P07311	99 aa		5.48	□□□□□ -1.53
UBE2D3-231	ENST00000513098	KRTAP5-9	P26371	169 aa		5.48	□□□□□ -1.53
UBE2D3-231	ENST00000513098	IMUP	Q9GZP8	106 aa		5.48	□□□□□ -1.53
UBE2D3-231	ENST00000513098		H0YAA0	97 aa		5.47	□□□□□ -1.53
UBE2D3-231	ENST00000513098	KMT2D	O14686	5537 aa		5.46	□□□□□ -1.54
UBE2D3-231	ENST00000513098	MDN1	Q9NU22	5596 aa		5.45	□□□□□ -1.54
UBE2D3-231	ENST00000513098	UQCRQ	O14949	82 aa		5.44	□□□□□ -1.54
UBE2D3-231	ENST00000513098	ATP5EP2	Q5VTU8	51 aa		5.44	□□□□□ -1.54
UBE2D3-231	ENST00000513098	FAM240A	A0A1B0GVK7	77 aa		5.43	□□□□□ -1.54
UBE2D3-231	ENST00000513098	ATOX1	O00244	68 aa		5.43	□□□□□ -1.54
UBE2D3-231	ENST00000513098	NDUFC1	O43677	76 aa		5.43	□□□□□ -1.54
UBE2D3-231	ENST00000513098		A8MUN3	132 aa		5.4	□□□□□ -1.54
UBE2D3-231	ENST00000513098		A0A1B0GV90	55 aa		5.39	□□□□□ -1.55
UBE2D3-231	ENST00000513098		H0Y9P7	68 aa		5.39	□□□□□ -1.55
UBE2D3-231	ENST00000513098	HIST1H4A	P62805	103 aa	Known RBP	5.37	□□□□□ -1.55
UBE2D3-231	ENST00000513098	KRTAP20-1	Q3LI63	56 aa		5.35	□□□□□ -1.55
UBE2D3-231	ENST00000513098	ADM2	Q7Z4H4	148 aa		5.33	□□□□□ -1.56
UBE2D3-231	ENST00000513098	LINC00643	Q86TS7	51 aa		5.31	□□□□□ -1.56
UBE2D3-231	ENST00000513098	PRO2289	Q9P1D8	64 aa		5.3	□□□□□ -1.56
UBE2D3-231	ENST00000513098	LINC00208	Q96KT6	92 aa		5.29	□□□□□ -1.56
UBE2D3-231	ENST00000513098	MT1X	P80297	61 aa		5.28	□□□□□ -1.56
UBE2D3-231	ENST00000513098	OCR1	Q9BZK8	76 aa		5.28	□□□□□ -1.56
UBE2D3-231	ENST00000513098	MP68	P56378	58 aa		5.26	□□□□□ -1.57
UBE2D3-231	ENST00000513098	PLAC4	Q8WY50	150 aa		5.25	□□□□□ -1.57
UBE2D3-231	ENST00000513098		H3BPC8	53 aa		5.22	□□□□□ -1.57
UBE2D3-231	ENST00000513098	KRTAP2-3	P0C7H8	128 aa		5.22	□□□□□ -1.57
UBE2D3-231	ENST00000513098	KRTAP12-2	P59991	146 aa		5.22	□□□□□ -1.57
UBE2D3-231	ENST00000513098	KRTAP2-4	Q9BYR9	128 aa		5.22	□□□□□ -1.57
UBE2D3-231	ENST00000513098	C20orf197	Q8N268	126 aa		5.21	□□□□□ -1.58
UBE2D3-231	ENST00000513098	SPRR2F	Q96RM1	72 aa		5.21	□□□□□ -1.58
UBE2D3-231	ENST00000513098		R4GN34	69 aa		5.21	□□□□□ -1.58
UBE2D3-231	ENST00000513098		P0C880	135 aa		5.2	□□□□□ -1.58
UBE2D3-231	ENST00000513098	DMAC1	Q96GE9	116 aa		5.18	□□□□□ -1.58
UBE2D3-231	ENST00000513098	KRTAP8-1	Q8IUC2	63 aa		5.16	□□□□□ -1.58
UBE2D3-231	ENST00000513098	SPRR2E	P22531	72 aa		5.15	□□□□□ -1.59
UBE2D3-231	ENST00000513098	SPRR2B	P35325	72 aa		5.15	□□□□□ -1.59
UBE2D3-231	ENST00000513098	SPRR2A	P35326	72 aa		5.15	□□□□□ -1.59
UBE2D3-231	ENST00000513098		M0QZ58	72 aa		5.14	□□□□□ -1.59
UBE2D3-231	ENST00000513098		J3QR89	54 aa		5.12	□□□□□ -1.59
UBE2D3-231	ENST00000513098	LCE1A	Q5T7P2	110 aa		5.12	□□□□□ -1.59
UBE2D3-231	ENST00000513098	TRAV7	A0A075B6U4	112 aa		5.09	□□□□□ -1.59
UBE2D3-231	ENST00000513098	SCGB1A1	P11684	91 aa		5.08	□□□□□ -1.6
UBE2D3-231	ENST00000513098	KRTAP4-8	A0A0G2JLE6	195 aa		5.07	□□□□□ -1.6
UBE2D3-231	ENST00000513098	PCP4	P48539	62 aa		5.07	□□□□□ -1.6
UBE2D3-231	ENST00000513098	KRTAP4-8	Q9BYQ9	185 aa		5.07	□□□□□ -1.6
UBE2D3-231	ENST00000513098		K7ERU9	68 aa		5.05	□□□□□ -1.6
UBE2D3-231	ENST00000513098	KRTAP2-2	Q9BYT5	123 aa		5.05	□□□□□ -1.6
UBE2D3-231	ENST00000513098	KRTAP2-1	Q9BYU5	128 aa		5.05	□□□□□ -1.6
UBE2D3-231	ENST00000513098	ACYP2	P14621	99 aa		5.04	□□□□□ -1.6
UBE2D3-231	ENST00000513098	KRTAP10-12	P60413	245 aa		5.04	□□□□□ -1.6
UBE2D3-231	ENST00000513098	LINC01554	Q52M75	96 aa		5.04	□□□□□ -1.6
UBE2D3-231	ENST00000513098	KRTAP10-7	P60409	375 aa	Predicted RBP	5.01	□□□□□ -1.61
UBE2D3-231	ENST00000513098	SPRR2D	P22532	72 aa		4.99	□□□□□ -1.61
UBE2D3-231	ENST00000513098	SPTSSB	Q8NFR3	76 aa		4.99	□□□□□ -1.61
UBE2D3-231	ENST00000513098	LOC100996750	A0A140TA64	210 aa		4.96	□□□□□ -1.62
UBE2D3-231	ENST00000513098	SMIM20	Q8N5G0	67 aa		4.96	□□□□□ -1.62
UBE2D3-231	ENST00000513098	KRTAP4-6	Q9BYQ5	205 aa		4.96	□□□□□ -1.62
UBE2D3-231	ENST00000513098	MT-ATP8	P03928	68 aa		4.93	□□□□□ -1.62
UBE2D3-231	ENST00000513098	CHKB-CPT1B	H3BT56	60 aa		4.88	□□□□□ -1.63
UBE2D3-231	ENST00000513098	LCE3B	Q5TA77	95 aa		4.88	□□□□□ -1.63
UBE2D3-231	ENST00000513098	SPANXA2-OT1	Q8N9U9	137 aa		4.84	□□□□□ -1.63
UBE2D3-231	ENST00000513098	KRTAP13-4	Q3LI77	160 aa		4.8	□□□□□ -1.64
UBE2D3-231	ENST00000513098	SNURF	Q9Y675	71 aa		4.8	□□□□□ -1.64
UBE2D3-231	ENST00000513098	CAMK2N1	Q7Z7J9	78 aa		4.75	□□□□□ -1.65
UBE2D3-231	ENST00000513098	DST	Q03001	7570 aa	Known RBP	4.75	□□□□□ -1.65
UBE2D3-231	ENST00000513098	LCE5A	Q5TCM9	118 aa		4.74	□□□□□ -1.65
UBE2D3-231	ENST00000513098	KRTAP19-7	Q3SYF9	63 aa		4.73	□□□□□ -1.65
UBE2D3-231	ENST00000513098	SERP2	Q8N6R1	65 aa		4.72	□□□□□ -1.65
UBE2D3-231	ENST00000513098	MT1E	P04732	61 aa		4.69	□□□□□ -1.66
UBE2D3-231	ENST00000513098	ANAPC13	Q9BS18	74 aa		4.68	□□□□□ -1.66
UBE2D3-231	ENST00000513098	KRTAP19-3	Q7Z4W3	81 aa		4.67	□□□□□ -1.66
UBE2D3-231	ENST00000513098	COA5	Q86WW8	74 aa		4.66	□□□□□ -1.66
UBE2D3-231	ENST00000513098	SEC61G	P60059	68 aa		4.64	□□□□□ -1.67
UBE2D3-231	ENST00000513098	SERP1	Q9Y6X1	66 aa		4.63	□□□□□ -1.67
UBE2D3-231	ENST00000513098	GPR98	Q8WXG9	6306 aa		4.63	□□□□□ -1.67
UBE2D3-231	ENST00000513098	SVIP	Q8NHG7	77 aa		4.61	□□□□□ -1.67
UBE2D3-231	ENST00000513098		A0A0D9SG42	100 aa		4.6	□□□□□ -1.67
UBE2D3-231	ENST00000513098		A0A1B0GU33	70 aa		4.59	□□□□□ -1.67
UBE2D3-231	ENST00000513098	SPATA8	Q6RVD6	105 aa		4.59	□□□□□ -1.67
UBE2D3-231	ENST00000513098	CCDC179	H3BU77	68 aa		4.58	□□□□□ -1.68
UBE2D3-231	ENST00000513098	MT1G	P13640	62 aa		4.58	□□□□□ -1.68
UBE2D3-231	ENST00000513098	KRTAP12-1	P59990	96 aa		4.56	□□□□□ -1.68
UBE2D3-231	ENST00000513098	COX7C	P15954	63 aa		4.55	□□□□□ -1.68
UBE2D3-231	ENST00000513098	KRTAP19-5	Q3LI72	72 aa		4.55	□□□□□ -1.68
UBE2D3-231	ENST00000513098	SPINT4	Q6UDR6	99 aa		4.55	□□□□□ -1.68
UBE2D3-231	ENST00000513098	KRTAP4-9	Q9BYQ8	210 aa		4.55	□□□□□ -1.68
UBE2D3-231	ENST00000513098	CYSTM1	Q9H1C7	97 aa		4.55	□□□□□ -1.68
UBE2D3-231	ENST00000513098		H7BZZ5	65 aa		4.51	□□□□□ -1.69
UBE2D3-231	ENST00000513098	PP632	Q6XCG6	107 aa		4.51	□□□□□ -1.69
UBE2D3-231	ENST00000513098	HMCN1	Q96RW7	5635 aa		4.47	□□□□□ -1.69
UBE2D3-231	ENST00000513098	SMIM26	A0A096LP01	95 aa		4.46	□□□□□ -1.7
UBE2D3-231	ENST00000513098	MT1M	Q8N339	61 aa		4.46	□□□□□ -1.7
UBE2D3-231	ENST00000513098	LCE1D	Q5T752	114 aa		4.45	□□□□□ -1.7
UBE2D3-231	ENST00000513098	LCE4A	Q5TA78	99 aa		4.45	□□□□□ -1.7
UBE2D3-231	ENST00000513098	MT1L	Q93083	61 aa		4.45	□□□□□ -1.7
UBE2D3-231	ENST00000513098	TMEM258	P61165	79 aa		4.44	□□□□□ -1.7
UBE2D3-231	ENST00000513098		A0A1B0GU69	56 aa		4.42	□□□□□ -1.7

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