RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 CXCL6P80162 114 aa4.35□□□□□ -1.71
NEDD9-213ENST00000512665 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.71
NEDD9-213ENST00000512665 K7EQZ3 153 aa4.34□□□□□ -1.71
NEDD9-213ENST00000512665 KRTAP8-1Q8IUC2 63 aa4.34□□□□□ -1.71
NEDD9-213ENST00000512665 SPINK7P58062 85 aa4.33□□□□□ -1.72
NEDD9-213ENST00000512665 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
NEDD9-213ENST00000512665 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
NEDD9-213ENST00000512665 hDV103S1A0JD37 113 aa4.3□□□□□ -1.72
NEDD9-213ENST00000512665 MRPL34Q9BQ48 92 aaKnown RBP4.3□□□□□ -1.72
NEDD9-213ENST00000512665 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
NEDD9-213ENST00000512665 J3QR89 54 aa4.29□□□□□ -1.72
NEDD9-213ENST00000512665 ATP5EP2Q5VTU8 51 aa4.29□□□□□ -1.72
NEDD9-213ENST00000512665 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
NEDD9-213ENST00000512665 Q8N9L7 120 aa4.29□□□□□ -1.72
NEDD9-213ENST00000512665 LINC00643Q86TS7 51 aa4.28□□□□□ -1.72
NEDD9-213ENST00000512665 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
NEDD9-213ENST00000512665 IMUPQ9GZP8 106 aa4.28□□□□□ -1.72
NEDD9-213ENST00000512665 CASC2Q6XLA1 102 aa4.27□□□□□ -1.73
NEDD9-213ENST00000512665 HCG22E2RYF7 251 aa4.26□□□□□ -1.73
NEDD9-213ENST00000512665 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
NEDD9-213ENST00000512665 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
NEDD9-213ENST00000512665 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
NEDD9-213ENST00000512665 K7ERU9 68 aa4.22□□□□□ -1.73
NEDD9-213ENST00000512665 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
NEDD9-213ENST00000512665 FAM236AA0A1B0GUQ0 79 aa4.21□□□□□ -1.74
NEDD9-213ENST00000512665 FAM236BA0A1B0GV22 79 aa4.21□□□□□ -1.74
NEDD9-213ENST00000512665 Q5W150 140 aa4.21□□□□□ -1.74
NEDD9-213ENST00000512665 TP53AIP1Q9HCN2 124 aa4.21□□□□□ -1.74
NEDD9-213ENST00000512665 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
NEDD9-213ENST00000512665 NDUFS5O43920 106 aa4.19□□□□□ -1.74
NEDD9-213ENST00000512665 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
NEDD9-213ENST00000512665 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
NEDD9-213ENST00000512665 HIST1H4AP62805 103 aaKnown RBP4.17□□□□□ -1.74
NEDD9-213ENST00000512665 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
NEDD9-213ENST00000512665 A0A087WVE0 104 aa4.14□□□□□ -1.75
NEDD9-213ENST00000512665 C7orf65Q6ZTY9 151 aa4.14□□□□□ -1.75
NEDD9-213ENST00000512665 UQCRQO14949 82 aa4.13□□□□□ -1.75
NEDD9-213ENST00000512665 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
NEDD9-213ENST00000512665 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
NEDD9-213ENST00000512665 OCR1Q9BZK8 76 aa4.12□□□□□ -1.75
NEDD9-213ENST00000512665 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
NEDD9-213ENST00000512665 TRAV22A0A0B4J277 110 aa4.1□□□□□ -1.75
NEDD9-213ENST00000512665 MT-ATP8P03928 68 aa4.1□□□□□ -1.75
NEDD9-213ENST00000512665 KLKP1Q107X0 134 aa4.1□□□□□ -1.75
NEDD9-213ENST00000512665 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
NEDD9-213ENST00000512665 ATOX1O00244 68 aa4.09□□□□□ -1.75
NEDD9-213ENST00000512665 MT1XP80297 61 aa4.09□□□□□ -1.75
NEDD9-213ENST00000512665 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
NEDD9-213ENST00000512665 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
NEDD9-213ENST00000512665 H0Y9P7 68 aa4.06□□□□□ -1.76
NEDD9-213ENST00000512665 C5orf47Q569G3 176 aa4.06□□□□□ -1.76
NEDD9-213ENST00000512665 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
NEDD9-213ENST00000512665 H3BPC8 53 aa4.04□□□□□ -1.76
NEDD9-213ENST00000512665 SCGB1A1P11684 91 aa4.04□□□□□ -1.76
NEDD9-213ENST00000512665 SMIM20Q8N5G0 67 aa4.04□□□□□ -1.76
NEDD9-213ENST00000512665 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
NEDD9-213ENST00000512665 C4orf26Q17RF5 130 aa4.03□□□□□ -1.76
NEDD9-213ENST00000512665 TRAV7A0A075B6U4 112 aa4.02□□□□□ -1.77
NEDD9-213ENST00000512665 MP68P56378 58 aa4.02□□□□□ -1.77
NEDD9-213ENST00000512665 C1orf64Q8NEQ6 169 aa4.02□□□□□ -1.77
NEDD9-213ENST00000512665 LINC00208Q96KT6 92 aa4.01□□□□□ -1.77
NEDD9-213ENST00000512665 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
NEDD9-213ENST00000512665 CSAG1Q6PB30 78 aa3.99□□□□□ -1.77
NEDD9-213ENST00000512665 MT4P47944 62 aa3.97□□□□□ -1.77
NEDD9-213ENST00000512665 KRTAP5-3Q6L8H2 238 aa3.96□□□□□ -1.78
NEDD9-213ENST00000512665 A8MUN3 132 aa3.95□□□□□ -1.78
NEDD9-213ENST00000512665 LCA10Q71F78 164 aa3.94□□□□□ -1.78
NEDD9-213ENST00000512665 SERP2Q8N6R1 65 aa3.94□□□□□ -1.78
NEDD9-213ENST00000512665 S4R3F8 94 aa3.91□□□□□ -1.78
NEDD9-213ENST00000512665 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
NEDD9-213ENST00000512665 DMAC1Q96GE9 116 aa3.89□□□□□ -1.79
NEDD9-213ENST00000512665 COX7CP15954 63 aa3.87□□□□□ -1.79
NEDD9-213ENST00000512665 C20orf197Q8N268 126 aa3.86□□□□□ -1.79
NEDD9-213ENST00000512665 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
NEDD9-213ENST00000512665 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
NEDD9-213ENST00000512665 SNURFQ9Y675 71 aa3.85□□□□□ -1.79
NEDD9-213ENST00000512665 NDUFC1O43677 76 aa3.84□□□□□ -1.79
NEDD9-213ENST00000512665 PCP4P48539 62 aa3.84□□□□□ -1.79
NEDD9-213ENST00000512665 PLAC4Q8WY50 150 aa3.84□□□□□ -1.79
NEDD9-213ENST00000512665 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
NEDD9-213ENST00000512665 H0YAA0 97 aa3.82□□□□□ -1.8
NEDD9-213ENST00000512665 ACYP2P14621 99 aa3.82□□□□□ -1.8
NEDD9-213ENST00000512665 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
NEDD9-213ENST00000512665 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
NEDD9-213ENST00000512665 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
NEDD9-213ENST00000512665 H7BZZ5 65 aa3.78□□□□□ -1.8
NEDD9-213ENST00000512665 CYSTM1Q9H1C7 97 aa3.76□□□□□ -1.81
NEDD9-213ENST00000512665 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
NEDD9-213ENST00000512665 SPTSSBQ8NFR3 76 aa3.72□□□□□ -1.81
NEDD9-213ENST00000512665 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
NEDD9-213ENST00000512665 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
NEDD9-213ENST00000512665 CHKB-CPT1BH3BT56 60 aa3.69□□□□□ -1.82
NEDD9-213ENST00000512665 COA5Q86WW8 74 aa3.68□□□□□ -1.82
NEDD9-213ENST00000512665 MT1EP04732 61 aa3.67□□□□□ -1.82
NEDD9-213ENST00000512665 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
NEDD9-213ENST00000512665 P0C880 135 aa3.66□□□□□ -1.82
NEDD9-213ENST00000512665 ATP5EP56381 51 aaPredicted RBP3.66□□□□□ -1.82
NEDD9-213ENST00000512665 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
NEDD9-213ENST00000512665 MT1GP13640 62 aa3.62□□□□□ -1.83
NEDD9-213ENST00000512665 TMEM258P61165 79 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms