RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 H0YAA0 97 aa10.63□□□□□ -0.71
SPOCK3-219ENST00000511905 RBM12B-AS1Q9P1G2 102 aa10.61□□□□□ -0.71
SPOCK3-219ENST00000511905 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
SPOCK3-219ENST00000511905 RYR3Q15413 4870 aa10.55□□□□□ -0.72
SPOCK3-219ENST00000511905 TPRXLQ17RH7 258 aa10.54□□□□□ -0.72
SPOCK3-219ENST00000511905 S4R3F8 94 aa10.5□□□□□ -0.73
SPOCK3-219ENST00000511905 DMBT1Q9UGM3 2413 aaPredicted RBP10.49□□□□□ -0.73
SPOCK3-219ENST00000511905 KRTAP10-6P60371 365 aaPredicted RBP10.42□□□□□ -0.74
SPOCK3-219ENST00000511905 PRAC1Q96KF2 57 aa10.39□□□□□ -0.75
SPOCK3-219ENST00000511905 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
SPOCK3-219ENST00000511905 KIAA1109Q2LD37 5005 aa10.38□□□□□ -0.75
SPOCK3-219ENST00000511905 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
SPOCK3-219ENST00000511905 K7ERS5 55 aa10.36□□□□□ -0.75
SPOCK3-219ENST00000511905 MYCBP2O75592 4640 aa10.27□□□□□ -0.76
SPOCK3-219ENST00000511905 CSAG1Q6PB30 78 aa10.2□□□□□ -0.78
SPOCK3-219ENST00000511905 KRTAP13-4Q3LI77 160 aa10.19□□□□□ -0.78
SPOCK3-219ENST00000511905 LINC01554Q52M75 96 aa10.16□□□□□ -0.78
SPOCK3-219ENST00000511905 P0C880 135 aa10.15□□□□□ -0.78
SPOCK3-219ENST00000511905 KRTAP4-5Q9BYR2 181 aa10.14□□□□□ -0.79
SPOCK3-219ENST00000511905 SEC61BP60468 96 aaKnown RBP10.13□□□□□ -0.79
SPOCK3-219ENST00000511905 EPPK1P58107 5090 aaKnown RBP10.13□□□□□ -0.79
SPOCK3-219ENST00000511905 LRP2P98164 4655 aa10.07□□□□□ -0.8
SPOCK3-219ENST00000511905 KRTAP25-1Q3LHN0 102 aa10.07□□□□□ -0.8
SPOCK3-219ENST00000511905 M0QZ58 72 aa10.05□□□□□ -0.8
SPOCK3-219ENST00000511905 ROMO1P60602 79 aa10.05□□□□□ -0.8
SPOCK3-219ENST00000511905 A0A0D9SG42 100 aa10.01□□□□□ -0.81
SPOCK3-219ENST00000511905 J3QL48 77 aa9.96□□□□□ -0.81
SPOCK3-219ENST00000511905 LPAP08519 4548 aa9.96□□□□□ -0.81
SPOCK3-219ENST00000511905 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
SPOCK3-219ENST00000511905 KRTAP12-2P59991 146 aa9.85□□□□□ -0.83
SPOCK3-219ENST00000511905 ABCA13Q86UQ4 5058 aa9.85□□□□□ -0.83
SPOCK3-219ENST00000511905 MUC17Q685J3 4493 aa9.81□□□□□ -0.84
SPOCK3-219ENST00000511905 KRTAP4-1Q9BYQ7 146 aa9.8□□□□□ -0.84
SPOCK3-219ENST00000511905 KRTAP19-2Q3LHN2 52 aa9.75□□□□□ -0.85
SPOCK3-219ENST00000511905 SPINT4Q6UDR6 99 aa9.74□□□□□ -0.85
SPOCK3-219ENST00000511905 R4GN34 69 aa9.7□□□□□ -0.86
SPOCK3-219ENST00000511905 CRIPTQ9P021 101 aa9.68□□□□□ -0.86
SPOCK3-219ENST00000511905 HERC2O95714 4834 aa9.68□□□□□ -0.86
SPOCK3-219ENST00000511905 BIRC6Q9NR09 4857 aa9.59□□□□□ -0.87
SPOCK3-219ENST00000511905 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
SPOCK3-219ENST00000511905 LORP23490 312 aaPredicted RBP9.5□□□□□ -0.89
SPOCK3-219ENST00000511905 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
SPOCK3-219ENST00000511905 FLGP20930 4061 aaPredicted RBP9.33□□□□□ -0.92
SPOCK3-219ENST00000511905 HERC1Q15751 4861 aa9.21□□□□□ -0.94
SPOCK3-219ENST00000511905 HMCN2Q8NDA2 5059 aa9.2□□□□□ -0.94
SPOCK3-219ENST00000511905 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
SPOCK3-219ENST00000511905 CAMK2N1Q7Z7J9 78 aa9.15□□□□□ -0.94
SPOCK3-219ENST00000511905 KRTAP15-1Q3LI76 137 aa9.13□□□□□ -0.95
SPOCK3-219ENST00000511905 PP632Q6XCG6 107 aa9.12□□□□□ -0.95
SPOCK3-219ENST00000511905 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
SPOCK3-219ENST00000511905 SPRR2GQ9BYE4 73 aa9.02□□□□□ -0.97
SPOCK3-219ENST00000511905 MUC2Q02817 5179 aa9.01□□□□□ -0.97
SPOCK3-219ENST00000511905 KRTAP23-1A1A580 65 aa8.97□□□□□ -0.97
SPOCK3-219ENST00000511905 MT1HP80294 61 aa8.94□□□□□ -0.98
SPOCK3-219ENST00000511905 TNP1P09430 55 aa8.89□□□□□ -0.99
SPOCK3-219ENST00000511905 KRTAP19-1Q8IUB9 90 aa8.88□□□□□ -0.99
SPOCK3-219ENST00000511905 M0R2T5 61 aa8.86□□□□□ -0.99
SPOCK3-219ENST00000511905 PLAC4Q8WY50 150 aa8.84□□□□□ -0.99
SPOCK3-219ENST00000511905 H3BS24 57 aa8.83□□□□□ -1
SPOCK3-219ENST00000511905 MT2AP02795 61 aa8.77□□□□□ -1.01
SPOCK3-219ENST00000511905 KRTAP9-8Q9BYQ0 159 aa8.74□□□□□ -1.01
SPOCK3-219ENST00000511905 MT1FP04733 61 aa8.71□□□□□ -1.01
SPOCK3-219ENST00000511905 KRTAP10-10P60014 251 aa8.7□□□□□ -1.02
SPOCK3-219ENST00000511905 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
SPOCK3-219ENST00000511905 KRTAP19-8Q3LI54 63 aa8.68□□□□□ -1.02
SPOCK3-219ENST00000511905 RNF213Q63HN8 5207 aa8.67□□□□□ -1.02
SPOCK3-219ENST00000511905 FAT4Q6V0I7 4981 aa8.65□□□□□ -1.02
SPOCK3-219ENST00000511905 UBR4Q5T4S7 5183 aa8.51□□□□□ -1.05
SPOCK3-219ENST00000511905 MT1BP07438 61 aa8.45□□□□□ -1.06
SPOCK3-219ENST00000511905 KRTAP9-3Q9BYQ3 159 aa8.4□□□□□ -1.06
SPOCK3-219ENST00000511905 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.07
SPOCK3-219ENST00000511905 LUZP6Q538Z0 58 aa8.4□□□□□ -1.07
SPOCK3-219ENST00000511905 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.07
SPOCK3-219ENST00000511905 SPRR5A0A1B0GTR4 108 aa8.39□□□□□ -1.07
SPOCK3-219ENST00000511905 KRTAP10-5P60370 271 aa8.34□□□□□ -1.07
SPOCK3-219ENST00000511905 MT1XP80297 61 aa8.34□□□□□ -1.07
SPOCK3-219ENST00000511905 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
SPOCK3-219ENST00000511905 KRTAP8-1Q8IUC2 63 aa8.29□□□□□ -1.08
SPOCK3-219ENST00000511905 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
SPOCK3-219ENST00000511905 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
SPOCK3-219ENST00000511905 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
SPOCK3-219ENST00000511905 KRTAP12-3P60328 96 aa8.01□□□□□ -1.13
SPOCK3-219ENST00000511905 KRTAP10-7P60409 375 aaPredicted RBP8.01□□□□□ -1.13
SPOCK3-219ENST00000511905 LCE2BO14633 110 aa8□□□□□ -1.13
SPOCK3-219ENST00000511905 A0A0A0MQY5 61 aa7.86□□□□□ -1.15
SPOCK3-219ENST00000511905 KRTAP19-5Q3LI72 72 aa7.68□□□□□ -1.18
SPOCK3-219ENST00000511905 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
SPOCK3-219ENST00000511905 LCE3CQ5T5A8 94 aa7.55□□□□□ -1.2
SPOCK3-219ENST00000511905 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
SPOCK3-219ENST00000511905 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
SPOCK3-219ENST00000511905 USH2AO75445 5202 aa7.47□□□□□ -1.21
SPOCK3-219ENST00000511905 KRTAP19-7Q3SYF9 63 aa7.44□□□□□ -1.22
SPOCK3-219ENST00000511905 KRTAP19-6Q3LI70 58 aa7.39□□□□□ -1.23
SPOCK3-219ENST00000511905 INE1O15225 51 aa7.27□□□□□ -1.25
SPOCK3-219ENST00000511905 MT1EP04732 61 aa7.26□□□□□ -1.25
SPOCK3-219ENST00000511905 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
SPOCK3-219ENST00000511905 MT1LQ93083 61 aa7.23□□□□□ -1.25
SPOCK3-219ENST00000511905 KMT2DO14686 5537 aa7.15□□□□□ -1.26
SPOCK3-219ENST00000511905 KRTAP9-6A8MVA2 160 aa7.14□□□□□ -1.27
SPOCK3-219ENST00000511905 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms