RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ZCCHC13Q8WW36 166 aaKnown RBP3.1□□□□□ -1.91
RNF4-217ENST00000511892 FAM236DA0A1B0GTK5 79 aa3.09□□□□□ -1.91
RNF4-217ENST00000511892 FAM236CP0DP71 79 aa3.09□□□□□ -1.91
RNF4-217ENST00000511892 TRAV22A0A0B4J277 110 aa3.08□□□□□ -1.92
RNF4-217ENST00000511892 LINC00313P59037 77 aa3.08□□□□□ -1.92
RNF4-217ENST00000511892 CYSTM1Q9H1C7 97 aa3.08□□□□□ -1.92
RNF4-217ENST00000511892 SNURFQ9Y675 71 aa3.08□□□□□ -1.92
RNF4-217ENST00000511892 H0Y9P7 68 aa3.07□□□□□ -1.92
RNF4-217ENST00000511892 Q8N9P0 234 aaPredicted RBP3.06□□□□□ -1.92
RNF4-217ENST00000511892 SERP1Q9Y6X1 66 aa3.06□□□□□ -1.92
RNF4-217ENST00000511892 LOC101927531A0A1B0GV80 90 aa3.05□□□□□ -1.92
RNF4-217ENST00000511892 NDUFS5O43920 106 aa3.05□□□□□ -1.92
RNF4-217ENST00000511892 Q75L30 129 aa3.05□□□□□ -1.92
RNF4-217ENST00000511892 SPANXA2-OT1Q8N9U9 137 aa3.05□□□□□ -1.92
RNF4-217ENST00000511892 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
RNF4-217ENST00000511892 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
RNF4-217ENST00000511892 C1orf64Q8NEQ6 169 aa3.04□□□□□ -1.92
RNF4-217ENST00000511892 CYP4F30PQ9H0H9 118 aa3.04□□□□□ -1.92
RNF4-217ENST00000511892 KRTAP16-1A8MUX0 517 aa3.03□□□□□ -1.92
RNF4-217ENST00000511892 NOTCH2NLQ7Z3S9 236 aa3.03□□□□□ -1.92
RNF4-217ENST00000511892 C20orf166-AS1Q96NR2 134 aa3.02□□□□□ -1.93
RNF4-217ENST00000511892 A8MUU9 505 aa3.01□□□□□ -1.93
RNF4-217ENST00000511892 COX6B2Q6YFQ2 88 aa3.01□□□□□ -1.93
RNF4-217ENST00000511892 ATP11AUNQ6ZP68 121 aa3.01□□□□□ -1.93
RNF4-217ENST00000511892 CRCT1Q9UGL9 99 aa3.01□□□□□ -1.93
RNF4-217ENST00000511892 M0R2T5 61 aa3□□□□□ -1.93
RNF4-217ENST00000511892 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
RNF4-217ENST00000511892 USH2AO75445 5202 aa2.99□□□□□ -1.93
RNF4-217ENST00000511892 SMIM26A0A096LP01 95 aa2.99□□□□□ -1.93
RNF4-217ENST00000511892 IGKV2-30P06310 120 aa2.98□□□□□ -1.93
RNF4-217ENST00000511892 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
RNF4-217ENST00000511892 Q5W150 140 aa2.98□□□□□ -1.93
RNF4-217ENST00000511892 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
RNF4-217ENST00000511892 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
RNF4-217ENST00000511892 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
RNF4-217ENST00000511892 C7orf65Q6ZTY9 151 aa2.94□□□□□ -1.94
RNF4-217ENST00000511892 V9GYY9 64 aa2.94□□□□□ -1.94
RNF4-217ENST00000511892 MPLKIPQ8TAP9 179 aa2.93□□□□□ -1.94
RNF4-217ENST00000511892 A8MUN3 132 aa2.92□□□□□ -1.94
RNF4-217ENST00000511892 HRES1P13985 223 aa2.92□□□□□ -1.94
RNF4-217ENST00000511892 ACYP2P14621 99 aa2.92□□□□□ -1.94
RNF4-217ENST00000511892 DMAC1Q96GE9 116 aa2.92□□□□□ -1.94
RNF4-217ENST00000511892 IGKV2D-30A0A075B6S6 120 aa2.91□□□□□ -1.94
RNF4-217ENST00000511892 COA5Q86WW8 74 aa2.91□□□□□ -1.94
RNF4-217ENST00000511892 Q1T7F1 81 aa2.9□□□□□ -1.95
RNF4-217ENST00000511892 MT2AP02795 61 aa2.89□□□□□ -1.95
RNF4-217ENST00000511892 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
RNF4-217ENST00000511892 RBM12B-AS1Q9P1G2 102 aa2.88□□□□□ -1.95
RNF4-217ENST00000511892 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
RNF4-217ENST00000511892 MT1FP04733 61 aa2.87□□□□□ -1.95
RNF4-217ENST00000511892 SPINK7P58062 85 aa2.87□□□□□ -1.95
RNF4-217ENST00000511892 C4orf26Q17RF5 130 aa2.85□□□□□ -1.95
RNF4-217ENST00000511892 SPTSSBQ8NFR3 76 aa2.85□□□□□ -1.95
RNF4-217ENST00000511892 LINC01558Q9Y6Z2 57 aa2.85□□□□□ -1.95
RNF4-217ENST00000511892 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
RNF4-217ENST00000511892 KRTAP2-2Q9BYT5 123 aa2.83□□□□□ -1.96
RNF4-217ENST00000511892 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
RNF4-217ENST00000511892 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
RNF4-217ENST00000511892 PRR15LQ9BU68 103 aa2.81□□□□□ -1.96
RNF4-217ENST00000511892 Q5VV11 94 aa2.79□□□□□ -1.96
RNF4-217ENST00000511892 PSPHP1O15172 72 aa2.78□□□□□ -1.96
RNF4-217ENST00000511892 A0A1B0GU69 56 aa2.77□□□□□ -1.97
RNF4-217ENST00000511892 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
RNF4-217ENST00000511892 SEC61GP60059 68 aa2.76□□□□□ -1.97
RNF4-217ENST00000511892 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
RNF4-217ENST00000511892 A6NED7 52 aa2.74□□□□□ -1.97
RNF4-217ENST00000511892 BRK1Q8WUW1 75 aa2.74□□□□□ -1.97
RNF4-217ENST00000511892 KRTAP19-6Q3LI70 58 aa2.73□□□□□ -1.97
RNF4-217ENST00000511892 CDC42SE1Q9NRR8 79 aa2.73□□□□□ -1.97
RNF4-217ENST00000511892 UQCR11O14957 56 aa2.72□□□□□ -1.97
RNF4-217ENST00000511892 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
RNF4-217ENST00000511892 S4R3F8 94 aa2.72□□□□□ -1.97
RNF4-217ENST00000511892 SVIPQ8NHG7 77 aa2.7□□□□□ -1.98
RNF4-217ENST00000511892 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
RNF4-217ENST00000511892 MIR22HGQ0VDD5 57 aa2.68□□□□□ -1.98
RNF4-217ENST00000511892 CSAG1Q6PB30 78 aa2.68□□□□□ -1.98
RNF4-217ENST00000511892 LCA10Q71F78 164 aa2.68□□□□□ -1.98
RNF4-217ENST00000511892 A0A1B0GU33 70 aa2.66□□□□□ -1.98
RNF4-217ENST00000511892 H0YAA0 97 aa2.66□□□□□ -1.98
RNF4-217ENST00000511892 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.99
RNF4-217ENST00000511892 NEBP20929 6669 aa2.64□□□□□ -1.99
RNF4-217ENST00000511892 MT1BP07438 61 aa2.62□□□□□ -1.99
RNF4-217ENST00000511892 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
RNF4-217ENST00000511892 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
RNF4-217ENST00000511892 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
RNF4-217ENST00000511892 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
RNF4-217ENST00000511892 SPRR2GQ9BYE4 73 aa2.61□□□□□ -1.99
RNF4-217ENST00000511892 A8MU10 97 aa2.6□□□□□ -1.99
RNF4-217ENST00000511892 K7ERS5 55 aa2.59□□□□□ -1.99
RNF4-217ENST00000511892 M0QZ58 72 aa2.59□□□□□ -1.99
RNF4-217ENST00000511892 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
RNF4-217ENST00000511892 A6NN06 94 aa2.58□□□□□ -2
RNF4-217ENST00000511892 KMT2DO14686 5537 aa2.58□□□□□ -2
RNF4-217ENST00000511892 MDN1Q9NU22 5596 aa2.57□□□□□ -2
RNF4-217ENST00000511892 P0C880 135 aa2.56□□□□□ -2
RNF4-217ENST00000511892 KRTAP10-5P60370 271 aa2.56□□□□□ -2
RNF4-217ENST00000511892 KTN1-AS1Q86SY8 53 aa2.54□□□□□ -2
RNF4-217ENST00000511892 CRIPTQ9P021 101 aa2.53□□□□□ -2
RNF4-217ENST00000511892 KRTAP13-4Q3LI77 160 aa2.52□□□□□ -2.01
RNF4-217ENST00000511892 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms