RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 APOBP04114 4563 aaKnown RBP7.65□□□□□ -1.19
SNCAIP-214ENST00000510003 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
SNCAIP-214ENST00000510003 PKHD1L1Q86WI1 4243 aa7.64□□□□□ -1.19
SNCAIP-214ENST00000510003 BIRC6Q9NR09 4857 aa7.63□□□□□ -1.19
SNCAIP-214ENST00000510003 RYR1P21817 5038 aa7.6□□□□□ -1.19
SNCAIP-214ENST00000510003 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
SNCAIP-214ENST00000510003 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
SNCAIP-214ENST00000510003 SMR3BP02814 79 aaPredicted RBP7.57□□□□□ -1.2
SNCAIP-214ENST00000510003 HSPG2P98160 4391 aa7.56□□□□□ -1.2
SNCAIP-214ENST00000510003 FAT1Q14517 4588 aa7.54□□□□□ -1.2
SNCAIP-214ENST00000510003 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
SNCAIP-214ENST00000510003 P0C880 135 aa7.52□□□□□ -1.2
SNCAIP-214ENST00000510003 KRTAP10-4P60372 401 aaPredicted RBP7.52□□□□□ -1.2
SNCAIP-214ENST00000510003 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
SNCAIP-214ENST00000510003 FLG2Q5D862 2391 aaPredicted RBP7.48□□□□□ -1.21
SNCAIP-214ENST00000510003 TPRXLQ17RH7 258 aa7.46□□□□□ -1.22
SNCAIP-214ENST00000510003 HERC2O95714 4834 aa7.46□□□□□ -1.22
SNCAIP-214ENST00000510003 A0A0D9SG42 100 aa7.44□□□□□ -1.22
SNCAIP-214ENST00000510003 S4R3F8 94 aa7.44□□□□□ -1.22
SNCAIP-214ENST00000510003 Q5VSD8 79 aa7.44□□□□□ -1.22
SNCAIP-214ENST00000510003 SPINT4Q6UDR6 99 aa7.42□□□□□ -1.22
SNCAIP-214ENST00000510003 KRTAP4-5Q9BYR2 181 aa7.41□□□□□ -1.22
SNCAIP-214ENST00000510003 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
SNCAIP-214ENST00000510003 ABCA13Q86UQ4 5058 aa7.35□□□□□ -1.23
SNCAIP-214ENST00000510003 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
SNCAIP-214ENST00000510003 KRTAP10-8P60410 259 aa7.31□□□□□ -1.24
SNCAIP-214ENST00000510003 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
SNCAIP-214ENST00000510003 FAT3Q8TDW7 4589 aa7.3□□□□□ -1.24
SNCAIP-214ENST00000510003 KRTAP12-2P59991 146 aa7.3□□□□□ -1.24
SNCAIP-214ENST00000510003 XP32Q5T750 250 aa7.28□□□□□ -1.24
SNCAIP-214ENST00000510003 PCLOQ9Y6V0 5065 aa7.27□□□□□ -1.25
SNCAIP-214ENST00000510003 MYCBP2O75592 4640 aa7.27□□□□□ -1.25
SNCAIP-214ENST00000510003 KRTAP12-1P59990 96 aa7.27□□□□□ -1.25
SNCAIP-214ENST00000510003 LRP1Q07954 4544 aaKnown RBP7.26□□□□□ -1.25
SNCAIP-214ENST00000510003 TNXBP22105 4242 aa7.26□□□□□ -1.25
SNCAIP-214ENST00000510003 DMBT1Q9UGM3 2413 aaPredicted RBP7.25□□□□□ -1.25
SNCAIP-214ENST00000510003 M0QZ58 72 aa7.23□□□□□ -1.25
SNCAIP-214ENST00000510003 J3QL48 77 aa7.21□□□□□ -1.26
SNCAIP-214ENST00000510003 NDUFAF8A1L188 74 aa7.18□□□□□ -1.26
SNCAIP-214ENST00000510003 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
SNCAIP-214ENST00000510003 MT1HL1P0DM35 61 aa7.11□□□□□ -1.27
SNCAIP-214ENST00000510003 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
SNCAIP-214ENST00000510003 HERC1Q15751 4861 aa7.01□□□□□ -1.29
SNCAIP-214ENST00000510003 R4GN34 69 aa6.91□□□□□ -1.3
SNCAIP-214ENST00000510003 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.3
SNCAIP-214ENST00000510003 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
SNCAIP-214ENST00000510003 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
SNCAIP-214ENST00000510003 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
SNCAIP-214ENST00000510003 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
SNCAIP-214ENST00000510003 LPAP08519 4548 aa6.78□□□□□ -1.32
SNCAIP-214ENST00000510003 LRP2P98164 4655 aa6.72□□□□□ -1.33
SNCAIP-214ENST00000510003 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
SNCAIP-214ENST00000510003 LUZP6Q538Z0 58 aa6.65□□□□□ -1.35
SNCAIP-214ENST00000510003 UBR4Q5T4S7 5183 aa6.6□□□□□ -1.35
SNCAIP-214ENST00000510003 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.36
SNCAIP-214ENST00000510003 MUC17Q685J3 4493 aa6.56□□□□□ -1.36
SNCAIP-214ENST00000510003 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
SNCAIP-214ENST00000510003 A0A0A0MQY5 61 aa6.53□□□□□ -1.36
SNCAIP-214ENST00000510003 RNF213Q63HN8 5207 aa6.49□□□□□ -1.37
SNCAIP-214ENST00000510003 KRTAP19-2Q3LHN2 52 aa6.48□□□□□ -1.37
SNCAIP-214ENST00000510003 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
SNCAIP-214ENST00000510003 MUC2Q02817 5179 aa6.46□□□□□ -1.38
SNCAIP-214ENST00000510003 TNP1P09430 55 aa6.43□□□□□ -1.38
SNCAIP-214ENST00000510003 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
SNCAIP-214ENST00000510003 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
SNCAIP-214ENST00000510003 FLGP20930 4061 aaPredicted RBP6.24□□□□□ -1.41
SNCAIP-214ENST00000510003 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
SNCAIP-214ENST00000510003 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
SNCAIP-214ENST00000510003 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
SNCAIP-214ENST00000510003 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
SNCAIP-214ENST00000510003 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
SNCAIP-214ENST00000510003 KRTAP4-12Q9BQ66 201 aa6.02□□□□□ -1.45
SNCAIP-214ENST00000510003 MT1HP80294 61 aa6.01□□□□□ -1.45
SNCAIP-214ENST00000510003 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
SNCAIP-214ENST00000510003 LCE3BQ5TA77 95 aa6□□□□□ -1.45
SNCAIP-214ENST00000510003 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
SNCAIP-214ENST00000510003 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.45
SNCAIP-214ENST00000510003 M0R2T5 61 aa5.93□□□□□ -1.46
SNCAIP-214ENST00000510003 INE1O15225 51 aa5.92□□□□□ -1.46
SNCAIP-214ENST00000510003 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
SNCAIP-214ENST00000510003 KRTAP9-9Q9BYP9 154 aa5.89□□□□□ -1.47
SNCAIP-214ENST00000510003 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
SNCAIP-214ENST00000510003 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
SNCAIP-214ENST00000510003 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
SNCAIP-214ENST00000510003 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
SNCAIP-214ENST00000510003 MT2AP02795 61 aa5.75□□□□□ -1.49
SNCAIP-214ENST00000510003 MT1FP04733 61 aa5.74□□□□□ -1.49
SNCAIP-214ENST00000510003 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
SNCAIP-214ENST00000510003 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
SNCAIP-214ENST00000510003 KRTAP10-5P60370 271 aa5.7□□□□□ -1.5
SNCAIP-214ENST00000510003 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
SNCAIP-214ENST00000510003 MT1XP80297 61 aa5.68□□□□□ -1.5
SNCAIP-214ENST00000510003 MT1BP07438 61 aa5.65□□□□□ -1.51
SNCAIP-214ENST00000510003 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
SNCAIP-214ENST00000510003 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
SNCAIP-214ENST00000510003 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
SNCAIP-214ENST00000510003 FSIP2Q5CZC0 6907 aa5.52□□□□□ -1.53
SNCAIP-214ENST00000510003 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
SNCAIP-214ENST00000510003 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
SNCAIP-214ENST00000510003 USH2AO75445 5202 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 326.2 ms