RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
CAST-228ENST00000509903 SPINK7P58062 85 aa4.12□□□□□ -1.75
CAST-228ENST00000509903 C9orf92A6NGG3 77 aa4.12□□□□□ -1.75
CAST-228ENST00000509903 ATP11AUNQ6ZP68 121 aa4.12□□□□□ -1.75
CAST-228ENST00000509903 KRTAP10-4P60372 401 aaPredicted RBP4.11□□□□□ -1.75
CAST-228ENST00000509903 A0A1B0GU69 56 aa4.1□□□□□ -1.75
CAST-228ENST00000509903 KRTAP9-3Q9BYQ3 159 aa4.09□□□□□ -1.76
CAST-228ENST00000509903 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
CAST-228ENST00000509903 A8MUU9 505 aa4.07□□□□□ -1.76
CAST-228ENST00000509903 C20orf166-AS1Q96NR2 134 aa4.07□□□□□ -1.76
CAST-228ENST00000509903 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
CAST-228ENST00000509903 FLG2Q5D862 2391 aaPredicted RBP4.04□□□□□ -1.76
CAST-228ENST00000509903 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
CAST-228ENST00000509903 A6NN06 94 aa4.03□□□□□ -1.76
CAST-228ENST00000509903 UQCR11O14957 56 aa4.02□□□□□ -1.77
CAST-228ENST00000509903 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
CAST-228ENST00000509903 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
CAST-228ENST00000509903 Q5VSD8 79 aa4□□□□□ -1.77
CAST-228ENST00000509903 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
CAST-228ENST00000509903 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
CAST-228ENST00000509903 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
CAST-228ENST00000509903 DMBT1Q9UGM3 2413 aaPredicted RBP3.97□□□□□ -1.77
CAST-228ENST00000509903 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
CAST-228ENST00000509903 FAT3Q8TDW7 4589 aa3.97□□□□□ -1.77
CAST-228ENST00000509903 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
CAST-228ENST00000509903 RYR1P21817 5038 aa3.96□□□□□ -1.77
CAST-228ENST00000509903 HSPG2P98160 4391 aa3.95□□□□□ -1.78
CAST-228ENST00000509903 TNXBP22105 4242 aa3.95□□□□□ -1.78
CAST-228ENST00000509903 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
CAST-228ENST00000509903 ADM2Q7Z4H4 148 aa3.95□□□□□ -1.78
CAST-228ENST00000509903 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
CAST-228ENST00000509903 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
CAST-228ENST00000509903 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
CAST-228ENST00000509903 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
CAST-228ENST00000509903 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
CAST-228ENST00000509903 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
CAST-228ENST00000509903 A0A1B0GU33 70 aa3.89□□□□□ -1.79
CAST-228ENST00000509903 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
CAST-228ENST00000509903 HERC2O95714 4834 aa3.87□□□□□ -1.79
CAST-228ENST00000509903 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
CAST-228ENST00000509903 H0YAA0 97 aa3.87□□□□□ -1.79
CAST-228ENST00000509903 H1FX-AS1Q4G0G2 97 aa3.87□□□□□ -1.79
CAST-228ENST00000509903 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
CAST-228ENST00000509903 S4R3F8 94 aa3.82□□□□□ -1.8
CAST-228ENST00000509903 KRTAP4-5Q9BYR2 181 aa3.8□□□□□ -1.8
CAST-228ENST00000509903 K7ERS5 55 aa3.79□□□□□ -1.8
CAST-228ENST00000509903 TPRXLQ17RH7 258 aa3.78□□□□□ -1.8
CAST-228ENST00000509903 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.81
CAST-228ENST00000509903 ABCA13Q86UQ4 5058 aa3.77□□□□□ -1.81
CAST-228ENST00000509903 KRTAP10-6P60371 365 aaPredicted RBP3.76□□□□□ -1.81
CAST-228ENST00000509903 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
CAST-228ENST00000509903 LRP2P98164 4655 aa3.75□□□□□ -1.81
CAST-228ENST00000509903 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
CAST-228ENST00000509903 LPAP08519 4548 aa3.71□□□□□ -1.81
CAST-228ENST00000509903 A0A0D9SG42 100 aa3.71□□□□□ -1.82
CAST-228ENST00000509903 KRTAP13-4Q3LI77 160 aa3.71□□□□□ -1.82
CAST-228ENST00000509903 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
CAST-228ENST00000509903 P0C880 135 aa3.7□□□□□ -1.82
CAST-228ENST00000509903 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
CAST-228ENST00000509903 ROMO1P60602 79 aa3.65□□□□□ -1.82
CAST-228ENST00000509903 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
CAST-228ENST00000509903 CRIPTQ9P021 101 aa3.62□□□□□ -1.83
CAST-228ENST00000509903 M0QZ58 72 aa3.61□□□□□ -1.83
CAST-228ENST00000509903 MUC2Q02817 5179 aa3.61□□□□□ -1.83
CAST-228ENST00000509903 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
CAST-228ENST00000509903 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
CAST-228ENST00000509903 HERC1Q15751 4861 aa3.58□□□□□ -1.84
CAST-228ENST00000509903 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
CAST-228ENST00000509903 MUC17Q685J3 4493 aa3.57□□□□□ -1.84
CAST-228ENST00000509903 R4GN34 69 aa3.55□□□□□ -1.84
CAST-228ENST00000509903 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
CAST-228ENST00000509903 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
CAST-228ENST00000509903 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
CAST-228ENST00000509903 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
CAST-228ENST00000509903 KRTAP19-2Q3LHN2 52 aa3.47□□□□□ -1.85
CAST-228ENST00000509903 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
CAST-228ENST00000509903 MT3P25713 68 aa3.43□□□□□ -1.86
CAST-228ENST00000509903 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
CAST-228ENST00000509903 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
CAST-228ENST00000509903 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
CAST-228ENST00000509903 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
CAST-228ENST00000509903 KRTAP9-8Q9BYQ0 159 aa3.38□□□□□ -1.87
CAST-228ENST00000509903 FAT4Q6V0I7 4981 aa3.34□□□□□ -1.87
CAST-228ENST00000509903 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.88
CAST-228ENST00000509903 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
CAST-228ENST00000509903 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
CAST-228ENST00000509903 M0R2T5 61 aa3.28□□□□□ -1.88
CAST-228ENST00000509903 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
CAST-228ENST00000509903 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
CAST-228ENST00000509903 KRTAP4-7Q9BYR0 210 aa3.24□□□□□ -1.89
CAST-228ENST00000509903 TNP1P09430 55 aa3.23□□□□□ -1.89
CAST-228ENST00000509903 MT1HP80294 61 aa3.22□□□□□ -1.89
CAST-228ENST00000509903 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
CAST-228ENST00000509903 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
CAST-228ENST00000509903 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CAST-228ENST00000509903 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
CAST-228ENST00000509903 MT2AP02795 61 aa3.17□□□□□ -1.9
CAST-228ENST00000509903 MT1FP04733 61 aa3.16□□□□□ -1.9
CAST-228ENST00000509903 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
CAST-228ENST00000509903 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms