RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 XP32Q5T750 250 aa9.31□□□□□ -0.92
CCHCR1-228ENST00000509552 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
CCHCR1-228ENST00000509552 RYR1P21817 5038 aa9.25□□□□□ -0.93
CCHCR1-228ENST00000509552 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
CCHCR1-228ENST00000509552 RYR3Q15413 4870 aa9.17□□□□□ -0.94
CCHCR1-228ENST00000509552 S4R3F8 94 aa9.17□□□□□ -0.94
CCHCR1-228ENST00000509552 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
CCHCR1-228ENST00000509552 K7ERS5 55 aa9.15□□□□□ -0.94
CCHCR1-228ENST00000509552 MT1HL1P0DM35 61 aa9.15□□□□□ -0.94
CCHCR1-228ENST00000509552 KRTAP17-1Q9BYP8 105 aa9.15□□□□□ -0.94
CCHCR1-228ENST00000509552 MYCBP2O75592 4640 aa9.14□□□□□ -0.95
CCHCR1-228ENST00000509552 LINC01554Q52M75 96 aa9.11□□□□□ -0.95
CCHCR1-228ENST00000509552 KRTAP10-6P60371 365 aaPredicted RBP9.09□□□□□ -0.95
CCHCR1-228ENST00000509552 KIAA1109Q2LD37 5005 aa9.07□□□□□ -0.96
CCHCR1-228ENST00000509552 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
CCHCR1-228ENST00000509552 TPRXLQ17RH7 258 aa9□□□□□ -0.97
CCHCR1-228ENST00000509552 KRTAP13-4Q3LI77 160 aa8.97□□□□□ -0.97
CCHCR1-228ENST00000509552 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
CCHCR1-228ENST00000509552 A0A0D9SG42 100 aa8.94□□□□□ -0.98
CCHCR1-228ENST00000509552 P0C880 135 aa8.92□□□□□ -0.98
CCHCR1-228ENST00000509552 ROMO1P60602 79 aa8.88□□□□□ -0.99
CCHCR1-228ENST00000509552 LRP2P98164 4655 aa8.85□□□□□ -0.99
CCHCR1-228ENST00000509552 EPPK1P58107 5090 aaKnown RBP8.84□□□□□ -0.99
CCHCR1-228ENST00000509552 LPAP08519 4548 aa8.84□□□□□ -0.99
CCHCR1-228ENST00000509552 CRIPTQ9P021 101 aa8.79□□□□□ -1
CCHCR1-228ENST00000509552 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
CCHCR1-228ENST00000509552 ABCA13Q86UQ4 5058 aa8.73□□□□□ -1.01
CCHCR1-228ENST00000509552 M0QZ58 72 aa8.71□□□□□ -1.01
CCHCR1-228ENST00000509552 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
CCHCR1-228ENST00000509552 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
CCHCR1-228ENST00000509552 SPINT4Q6UDR6 99 aa8.67□□□□□ -1.02
CCHCR1-228ENST00000509552 KRTAP12-1P59990 96 aa8.65□□□□□ -1.02
CCHCR1-228ENST00000509552 J3QL48 77 aa8.59□□□□□ -1.03
CCHCR1-228ENST00000509552 R4GN34 69 aa8.52□□□□□ -1.05
CCHCR1-228ENST00000509552 MUC17Q685J3 4493 aa8.51□□□□□ -1.05
CCHCR1-228ENST00000509552 C10orf95Q9H7T3 257 aa8.49□□□□□ -1.05
CCHCR1-228ENST00000509552 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
CCHCR1-228ENST00000509552 HERC2O95714 4834 aa8.4□□□□□ -1.07
CCHCR1-228ENST00000509552 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
CCHCR1-228ENST00000509552 KRTAP19-2Q3LHN2 52 aa8.32□□□□□ -1.08
CCHCR1-228ENST00000509552 BIRC6Q9NR09 4857 aa8.17□□□□□ -1.1
CCHCR1-228ENST00000509552 H3BS24 57 aa8.15□□□□□ -1.1
CCHCR1-228ENST00000509552 FLGP20930 4061 aaPredicted RBP8.13□□□□□ -1.11
CCHCR1-228ENST00000509552 KRTAP15-1Q3LI76 137 aa8.11□□□□□ -1.11
CCHCR1-228ENST00000509552 MUC2Q02817 5179 aa8.1□□□□□ -1.11
CCHCR1-228ENST00000509552 CAMK2N1Q7Z7J9 78 aa8.08□□□□□ -1.12
CCHCR1-228ENST00000509552 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.14
CCHCR1-228ENST00000509552 HERC1Q15751 4861 aa7.95□□□□□ -1.14
CCHCR1-228ENST00000509552 PP632Q6XCG6 107 aa7.92□□□□□ -1.14
CCHCR1-228ENST00000509552 PCLOQ9Y6V0 5065 aa7.91□□□□□ -1.14
CCHCR1-228ENST00000509552 NDUFAF8A1L188 74 aa7.88□□□□□ -1.15
CCHCR1-228ENST00000509552 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
CCHCR1-228ENST00000509552 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
CCHCR1-228ENST00000509552 TNP1P09430 55 aa7.78□□□□□ -1.16
CCHCR1-228ENST00000509552 M0R2T5 61 aa7.75□□□□□ -1.17
CCHCR1-228ENST00000509552 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
CCHCR1-228ENST00000509552 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.17
CCHCR1-228ENST00000509552 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
CCHCR1-228ENST00000509552 MT1HP80294 61 aa7.66□□□□□ -1.18
CCHCR1-228ENST00000509552 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
CCHCR1-228ENST00000509552 RNF213Q63HN8 5207 aa7.63□□□□□ -1.19
CCHCR1-228ENST00000509552 UBR4Q5T4S7 5183 aa7.57□□□□□ -1.2
CCHCR1-228ENST00000509552 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
CCHCR1-228ENST00000509552 MT2AP02795 61 aa7.53□□□□□ -1.2
CCHCR1-228ENST00000509552 MT1FP04733 61 aa7.51□□□□□ -1.21
CCHCR1-228ENST00000509552 LUZP6Q538Z0 58 aa7.51□□□□□ -1.21
CCHCR1-228ENST00000509552 KRTAP9-8Q9BYQ0 159 aa7.47□□□□□ -1.21
CCHCR1-228ENST00000509552 KRTAP19-8Q3LI54 63 aa7.38□□□□□ -1.23
CCHCR1-228ENST00000509552 LCE3AQ5TA76 89 aa7.32□□□□□ -1.24
CCHCR1-228ENST00000509552 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
CCHCR1-228ENST00000509552 MT1BP07438 61 aa7.26□□□□□ -1.25
CCHCR1-228ENST00000509552 KRTAP10-5P60370 271 aa7.21□□□□□ -1.26
CCHCR1-228ENST00000509552 MT1XP80297 61 aa7.19□□□□□ -1.26
CCHCR1-228ENST00000509552 KRTAP9-3Q9BYQ3 159 aa7.16□□□□□ -1.26
CCHCR1-228ENST00000509552 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.26
CCHCR1-228ENST00000509552 KRTAP10-12P60413 245 aa7.09□□□□□ -1.28
CCHCR1-228ENST00000509552 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
CCHCR1-228ENST00000509552 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
CCHCR1-228ENST00000509552 KRTAP12-3P60328 96 aa7□□□□□ -1.29
CCHCR1-228ENST00000509552 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
CCHCR1-228ENST00000509552 LCE2BO14633 110 aa6.87□□□□□ -1.31
CCHCR1-228ENST00000509552 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
CCHCR1-228ENST00000509552 KRTAP19-5Q3LI72 72 aa6.7□□□□□ -1.34
CCHCR1-228ENST00000509552 USH2AO75445 5202 aa6.67□□□□□ -1.34
CCHCR1-228ENST00000509552 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
CCHCR1-228ENST00000509552 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
CCHCR1-228ENST00000509552 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
CCHCR1-228ENST00000509552 KMT2DO14686 5537 aa6.54□□□□□ -1.36
CCHCR1-228ENST00000509552 INE1O15225 51 aa6.42□□□□□ -1.38
CCHCR1-228ENST00000509552 KRTAP19-7Q3SYF9 63 aa6.41□□□□□ -1.38
CCHCR1-228ENST00000509552 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
CCHCR1-228ENST00000509552 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
CCHCR1-228ENST00000509552 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
CCHCR1-228ENST00000509552 MT1EP04732 61 aa6.25□□□□□ -1.41
CCHCR1-228ENST00000509552 MT1LQ93083 61 aa6.24□□□□□ -1.41
CCHCR1-228ENST00000509552 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
CCHCR1-228ENST00000509552 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
CCHCR1-228ENST00000509552 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
CCHCR1-228ENST00000509552 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
CCHCR1-228ENST00000509552 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms