RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
DDX41-208ENST00000507955 LPAP08519 4548 aa7.64□□□□□ -1.19
DDX41-208ENST00000507955 MT1HL1P0DM35 61 aa7.6□□□□□ -1.19
DDX41-208ENST00000507955 ABCA13Q86UQ4 5058 aa7.58□□□□□ -1.2
DDX41-208ENST00000507955 H0YAA0 97 aa7.58□□□□□ -1.2
DDX41-208ENST00000507955 XP32Q5T750 250 aa7.58□□□□□ -1.2
DDX41-208ENST00000507955 LRP2P98164 4655 aa7.57□□□□□ -1.2
DDX41-208ENST00000507955 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
DDX41-208ENST00000507955 RPL37P61927 97 aaKnown RBP7.53□□□□□ -1.2
DDX41-208ENST00000507955 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.21
DDX41-208ENST00000507955 CSAG1Q6PB30 78 aa7.48□□□□□ -1.21
DDX41-208ENST00000507955 A0A1B0GU33 70 aa7.47□□□□□ -1.21
DDX41-208ENST00000507955 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
DDX41-208ENST00000507955 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
DDX41-208ENST00000507955 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
DDX41-208ENST00000507955 H3BS24 57 aa7.35□□□□□ -1.23
DDX41-208ENST00000507955 KRTAP10-6P60371 365 aaPredicted RBP7.29□□□□□ -1.24
DDX41-208ENST00000507955 S4R3F8 94 aa7.29□□□□□ -1.24
DDX41-208ENST00000507955 HERC2O95714 4834 aa7.28□□□□□ -1.24
DDX41-208ENST00000507955 TPRXLQ17RH7 258 aa7.28□□□□□ -1.24
DDX41-208ENST00000507955 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
DDX41-208ENST00000507955 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
DDX41-208ENST00000507955 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
DDX41-208ENST00000507955 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
DDX41-208ENST00000507955 P0C880 135 aa7.2□□□□□ -1.26
DDX41-208ENST00000507955 MUC2Q02817 5179 aa7.19□□□□□ -1.26
DDX41-208ENST00000507955 A0A0D9SG42 100 aa7.16□□□□□ -1.26
DDX41-208ENST00000507955 K7ERS5 55 aa7.15□□□□□ -1.26
DDX41-208ENST00000507955 J3QL48 77 aa7.14□□□□□ -1.27
DDX41-208ENST00000507955 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
DDX41-208ENST00000507955 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
DDX41-208ENST00000507955 ROMO1P60602 79 aa7.09□□□□□ -1.27
DDX41-208ENST00000507955 HERC1Q15751 4861 aa7.06□□□□□ -1.28
DDX41-208ENST00000507955 BIRC6Q9NR09 4857 aa7.05□□□□□ -1.28
DDX41-208ENST00000507955 PCLOQ9Y6V0 5065 aa7.02□□□□□ -1.29
DDX41-208ENST00000507955 KRTAP12-2P59991 146 aa7□□□□□ -1.29
DDX41-208ENST00000507955 SEC61BP60468 96 aaKnown RBP7□□□□□ -1.29
DDX41-208ENST00000507955 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
DDX41-208ENST00000507955 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
DDX41-208ENST00000507955 SPINT4Q6UDR6 99 aa6.9□□□□□ -1.3
DDX41-208ENST00000507955 LORP23490 312 aaPredicted RBP6.87□□□□□ -1.31
DDX41-208ENST00000507955 KRTAP19-2Q3LHN2 52 aa6.87□□□□□ -1.31
DDX41-208ENST00000507955 HMCN2Q8NDA2 5059 aa6.83□□□□□ -1.32
DDX41-208ENST00000507955 M0QZ58 72 aa6.83□□□□□ -1.32
DDX41-208ENST00000507955 FAT4Q6V0I7 4981 aa6.81□□□□□ -1.32
DDX41-208ENST00000507955 R4GN34 69 aa6.79□□□□□ -1.32
DDX41-208ENST00000507955 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
DDX41-208ENST00000507955 FLGP20930 4061 aaPredicted RBP6.73□□□□□ -1.33
DDX41-208ENST00000507955 UBR4Q5T4S7 5183 aa6.69□□□□□ -1.34
DDX41-208ENST00000507955 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
DDX41-208ENST00000507955 LCE2CQ5TA81 110 aa6.55□□□□□ -1.36
DDX41-208ENST00000507955 A0A0A0MQY5 61 aa6.55□□□□□ -1.36
DDX41-208ENST00000507955 NDUFAF8A1L188 74 aa6.49□□□□□ -1.37
DDX41-208ENST00000507955 M0R2T5 61 aa6.42□□□□□ -1.38
DDX41-208ENST00000507955 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
DDX41-208ENST00000507955 MT1HP80294 61 aa6.38□□□□□ -1.39
DDX41-208ENST00000507955 PLAC4Q8WY50 150 aa6.29□□□□□ -1.4
DDX41-208ENST00000507955 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
DDX41-208ENST00000507955 MT1FP04733 61 aa6.25□□□□□ -1.41
DDX41-208ENST00000507955 MT2AP02795 61 aa6.23□□□□□ -1.41
DDX41-208ENST00000507955 KRTAP10-10P60014 251 aa6.23□□□□□ -1.41
DDX41-208ENST00000507955 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
DDX41-208ENST00000507955 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
DDX41-208ENST00000507955 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
DDX41-208ENST00000507955 TNP1P09430 55 aa6.1□□□□□ -1.43
DDX41-208ENST00000507955 LUZP6Q538Z0 58 aa5.98□□□□□ -1.45
DDX41-208ENST00000507955 MT1BP07438 61 aa5.97□□□□□ -1.45
DDX41-208ENST00000507955 USH2AO75445 5202 aa5.97□□□□□ -1.45
DDX41-208ENST00000507955 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.45
DDX41-208ENST00000507955 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
DDX41-208ENST00000507955 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
DDX41-208ENST00000507955 LCE3AQ5TA76 89 aa5.9□□□□□ -1.47
DDX41-208ENST00000507955 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
DDX41-208ENST00000507955 MT1XP80297 61 aa5.89□□□□□ -1.47
DDX41-208ENST00000507955 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
DDX41-208ENST00000507955 LCE2BO14633 110 aa5.79□□□□□ -1.48
DDX41-208ENST00000507955 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
DDX41-208ENST00000507955 KMT2DO14686 5537 aa5.75□□□□□ -1.49
DDX41-208ENST00000507955 LCE2AQ5TA79 106 aaPredicted RBP5.75□□□□□ -1.49
DDX41-208ENST00000507955 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
DDX41-208ENST00000507955 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
DDX41-208ENST00000507955 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
DDX41-208ENST00000507955 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
DDX41-208ENST00000507955 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
DDX41-208ENST00000507955 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
DDX41-208ENST00000507955 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
DDX41-208ENST00000507955 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
DDX41-208ENST00000507955 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
DDX41-208ENST00000507955 INE1O15225 51 aa5.27□□□□□ -1.57
DDX41-208ENST00000507955 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
DDX41-208ENST00000507955 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
DDX41-208ENST00000507955 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
DDX41-208ENST00000507955 KRTAP19-6Q3LI70 58 aa5.14□□□□□ -1.59
DDX41-208ENST00000507955 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
DDX41-208ENST00000507955 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
DDX41-208ENST00000507955 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
DDX41-208ENST00000507955 MT1EP04732 61 aa5.09□□□□□ -1.6
DDX41-208ENST00000507955 MT1LQ93083 61 aa5.06□□□□□ -1.6
DDX41-208ENST00000507955 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
DDX41-208ENST00000507955 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms