RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 A8MUN3 132 aa12.83□□□□□ -0.36
MSX2-202ENST00000507785 KRTAP19-1Q8IUB9 90 aa12.81□□□□□ -0.36
MSX2-202ENST00000507785 FAM236AA0A1B0GUQ0 79 aa12.8□□□□□ -0.36
MSX2-202ENST00000507785 FAM236BA0A1B0GV22 79 aa12.8□□□□□ -0.36
MSX2-202ENST00000507785 FCGBPQ9Y6R7 5405 aaPredicted RBP12.75□□□□□ -0.37
MSX2-202ENST00000507785 NDUFC1O43677 76 aa12.7□□□□□ -0.38
MSX2-202ENST00000507785 KRTAP19-6Q3LI70 58 aa12.67□□□□□ -0.38
MSX2-202ENST00000507785 TRAV7A0A075B6U4 112 aa12.66□□□□□ -0.38
MSX2-202ENST00000507785 SMIM20Q8N5G0 67 aa12.65□□□□□ -0.38
MSX2-202ENST00000507785 SPRR2GQ9BYE4 73 aa12.62□□□□□ -0.39
MSX2-202ENST00000507785 DMAC1Q96GE9 116 aa12.6□□□□□ -0.39
MSX2-202ENST00000507785 H0YAA0 97 aa12.56□□□□□ -0.4
MSX2-202ENST00000507785 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.53□□□□□ -0.4
MSX2-202ENST00000507785 KRTAP3-2Q9BYR7 98 aa12.53□□□□□ -0.4
MSX2-202ENST00000507785 KRTAP19-8Q3LI54 63 aa12.51□□□□□ -0.41
MSX2-202ENST00000507785 CRIPTQ9P021 101 aa12.48□□□□□ -0.41
MSX2-202ENST00000507785 MT1BP07438 61 aa12.47□□□□□ -0.41
MSX2-202ENST00000507785 Q5VV11 94 aa12.42□□□□□ -0.42
MSX2-202ENST00000507785 ADM2Q7Z4H4 148 aa12.41□□□□□ -0.42
MSX2-202ENST00000507785 MACF1Q9UPN3 7388 aaKnown RBP12.37□□□□□ -0.43
MSX2-202ENST00000507785 SNURFQ9Y675 71 aa12.35□□□□□ -0.43
MSX2-202ENST00000507785 SERP2Q8N6R1 65 aa12.33□□□□□ -0.44
MSX2-202ENST00000507785 ACYP2P14621 99 aa12.31□□□□□ -0.44
MSX2-202ENST00000507785 KRTAP9-7A8MTY7 169 aa12.27□□□□□ -0.45
MSX2-202ENST00000507785 C20orf197Q8N268 126 aa12.26□□□□□ -0.45
MSX2-202ENST00000507785 P0C880 135 aa12.2□□□□□ -0.46
MSX2-202ENST00000507785 SPANXA2-OT1Q8N9U9 137 aa12.17□□□□□ -0.46
MSX2-202ENST00000507785 A6NN06 94 aa12.14□□□□□ -0.47
MSX2-202ENST00000507785 SYNE2Q8WXH0 6885 aaKnown RBP12.13□□□□□ -0.47
MSX2-202ENST00000507785 KRTAP10-5P60370 271 aa12.11□□□□□ -0.47
MSX2-202ENST00000507785 SPTSSBQ8NFR3 76 aa12.08□□□□□ -0.48
MSX2-202ENST00000507785 R4GN34 69 aa12.05□□□□□ -0.48
MSX2-202ENST00000507785 CHKB-CPT1BH3BT56 60 aa12.04□□□□□ -0.48
MSX2-202ENST00000507785 COX7CP15954 63 aa12.03□□□□□ -0.48
MSX2-202ENST00000507785 M0QZ58 72 aa11.98□□□□□ -0.49
MSX2-202ENST00000507785 CYSTM1Q9H1C7 97 aa11.84□□□□□ -0.51
MSX2-202ENST00000507785 PLAC4Q8WY50 150 aa11.83□□□□□ -0.52
MSX2-202ENST00000507785 KRTAP6-3Q3LI67 103 aa11.82□□□□□ -0.52
MSX2-202ENST00000507785 H7BZZ5 65 aa11.81□□□□□ -0.52
MSX2-202ENST00000507785 COA5Q86WW8 74 aa11.8□□□□□ -0.52
MSX2-202ENST00000507785 MT1XP80297 61 aa11.77□□□□□ -0.53
MSX2-202ENST00000507785 LINC01554Q52M75 96 aa11.76□□□□□ -0.53
MSX2-202ENST00000507785 ANAPC13Q9BS18 74 aa11.72□□□□□ -0.53
MSX2-202ENST00000507785 PRO2289Q9P1D8 64 aa11.7□□□□□ -0.54
MSX2-202ENST00000507785 KRTAP13-4Q3LI77 160 aa11.54□□□□□ -0.56
MSX2-202ENST00000507785 CCDC179H3BU77 68 aa11.52□□□□□ -0.57
MSX2-202ENST00000507785 KMT2DO14686 5537 aa11.46□□□□□ -0.58
MSX2-202ENST00000507785 MUC12Q9UKN1 5478 aa11.45□□□□□ -0.58
MSX2-202ENST00000507785 KRTAP5-9P26371 169 aa11.43□□□□□ -0.58
MSX2-202ENST00000507785 SEC61GP60059 68 aa11.42□□□□□ -0.58
MSX2-202ENST00000507785 KRTAP12-2P59991 146 aa11.41□□□□□ -0.58
MSX2-202ENST00000507785 NEBP20929 6669 aa11.4□□□□□ -0.58
MSX2-202ENST00000507785 SERP1Q9Y6X1 66 aa11.4□□□□□ -0.58
MSX2-202ENST00000507785 ATP5EP56381 51 aaPredicted RBP11.26□□□□□ -0.61
MSX2-202ENST00000507785 A0A1B0GU33 70 aa11.25□□□□□ -0.61
MSX2-202ENST00000507785 KRTAP10-7P60409 375 aaPredicted RBP11.22□□□□□ -0.61
MSX2-202ENST00000507785 SPATA8Q6RVD6 105 aa11.21□□□□□ -0.61
MSX2-202ENST00000507785 KRTAP10-12P60413 245 aa11.17□□□□□ -0.62
MSX2-202ENST00000507785 MDN1Q9NU22 5596 aa11.17□□□□□ -0.62
MSX2-202ENST00000507785 A0A1B0GU69 56 aa11.16□□□□□ -0.62
MSX2-202ENST00000507785 KRTAP8-1Q8IUC2 63 aa11.16□□□□□ -0.62
MSX2-202ENST00000507785 A0A0D9SG42 100 aa11.14□□□□□ -0.63
MSX2-202ENST00000507785 KRTAP4-8A0A0G2JLE6 195 aa11.14□□□□□ -0.63
MSX2-202ENST00000507785 KRTAP4-8Q9BYQ9 185 aa11.14□□□□□ -0.63
MSX2-202ENST00000507785 SPRR2FQ96RM1 72 aa11.11□□□□□ -0.63
MSX2-202ENST00000507785 CAMK2N1Q7Z7J9 78 aa11.1□□□□□ -0.63
MSX2-202ENST00000507785 TMEM258P61165 79 aa11.09□□□□□ -0.63
MSX2-202ENST00000507785 KRTAP12-1P59990 96 aa10.99□□□□□ -0.65
MSX2-202ENST00000507785 LOC100996750A0A140TA64 210 aa10.98□□□□□ -0.65
MSX2-202ENST00000507785 KRTAP4-6Q9BYQ5 205 aa10.98□□□□□ -0.65
MSX2-202ENST00000507785 SPINT4Q6UDR6 99 aa10.96□□□□□ -0.65
MSX2-202ENST00000507785 LINC01558Q9Y6Z2 57 aa10.93□□□□□ -0.66
MSX2-202ENST00000507785 SMIM26A0A096LP01 95 aa10.91□□□□□ -0.66
MSX2-202ENST00000507785 PRR15LQ9BU68 103 aa10.9□□□□□ -0.66
MSX2-202ENST00000507785 SPRR2EP22531 72 aa10.88□□□□□ -0.67
MSX2-202ENST00000507785 SPRR2BP35325 72 aa10.88□□□□□ -0.67
MSX2-202ENST00000507785 SPRR2AP35326 72 aa10.88□□□□□ -0.67
MSX2-202ENST00000507785 A8MU10 97 aa10.86□□□□□ -0.67
MSX2-202ENST00000507785 LCE1AQ5T7P2 110 aa10.82□□□□□ -0.68
MSX2-202ENST00000507785 KRTAP20-1Q3LI63 56 aa10.77□□□□□ -0.69
MSX2-202ENST00000507785 KRTAP2-3P0C7H8 128 aa10.58□□□□□ -0.72
MSX2-202ENST00000507785 KRTAP2-4Q9BYR9 128 aa10.58□□□□□ -0.72
MSX2-202ENST00000507785 UQCR11O14957 56 aa10.56□□□□□ -0.72
MSX2-202ENST00000507785 KRTAP19-7Q3SYF9 63 aa10.52□□□□□ -0.73
MSX2-202ENST00000507785 SPRR2DP22532 72 aa10.51□□□□□ -0.73
MSX2-202ENST00000507785 C10orf95Q9H7T3 257 aa10.49□□□□□ -0.73
MSX2-202ENST00000507785 V9GYY9 64 aa10.41□□□□□ -0.74
MSX2-202ENST00000507785 MT1EP04732 61 aa10.4□□□□□ -0.74
MSX2-202ENST00000507785 Q1T7F1 81 aa10.4□□□□□ -0.74
MSX2-202ENST00000507785 MIR22HGQ0VDD5 57 aa10.36□□□□□ -0.75
MSX2-202ENST00000507785 TNP1P09430 55 aa10.34□□□□□ -0.75
MSX2-202ENST00000507785 PSPHP1O15172 72 aa10.33□□□□□ -0.76
MSX2-202ENST00000507785 KRTAP19-5Q3LI72 72 aa10.3□□□□□ -0.76
MSX2-202ENST00000507785 KRTAP2-2Q9BYT5 123 aa10.27□□□□□ -0.77
MSX2-202ENST00000507785 KRTAP2-1Q9BYU5 128 aa10.27□□□□□ -0.77
MSX2-202ENST00000507785 LCE5AQ5TCM9 118 aa10.24□□□□□ -0.77
MSX2-202ENST00000507785 KRTAP19-3Q7Z4W3 81 aa10.24□□□□□ -0.77
MSX2-202ENST00000507785 PCP4P48539 62 aa10.23□□□□□ -0.77
MSX2-202ENST00000507785 LCE3AQ5TA76 89 aa10.22□□□□□ -0.77
MSX2-202ENST00000507785 LCE3BQ5TA77 95 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 514 ms