RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, humanhuman

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-205ENST00000507316 MXRA5Q9NR99 2828 aa2.25□□□□□ -2.05
TUSC3-205ENST00000507316 NBEAL1Q6ZS30 2694 aa2.25□□□□□ -2.05
TUSC3-205ENST00000507316 FASNP49327 2511 aaKnown RBP2.25□□□□□ -2.05
TUSC3-205ENST00000507316 TTC28Q96AY4 2481 aa2.25□□□□□ -2.05
TUSC3-205ENST00000507316 BSNQ9UPA5 3926 aa2.24□□□□□ -2.05
TUSC3-205ENST00000507316 ITPR3Q14573 2671 aa2.24□□□□□ -2.05
TUSC3-205ENST00000507316 SMR3AQ99954 134 aa2.23□□□□□ -2.05
TUSC3-205ENST00000507316 EPG5Q9HCE0 2579 aa2.23□□□□□ -2.05
TUSC3-205ENST00000507316 ABCA12Q86UK0 2595 aa2.22□□□□□ -2.05
TUSC3-205ENST00000507316 DNAH1Q9P2D7 4330 aa2.22□□□□□ -2.05
TUSC3-205ENST00000507316 CACNA1AO00555 2505 aa2.22□□□□□ -2.05
TUSC3-205ENST00000507316 PDZD2O15018 2839 aa2.21□□□□□ -2.06
TUSC3-205ENST00000507316 HIVEP1P15822 2718 aa2.2□□□□□ -2.06
TUSC3-205ENST00000507316 RELNP78509 3460 aa2.2□□□□□ -2.06
TUSC3-205ENST00000507316 USP9YO00507 2555 aaPredicted RBP2.2□□□□□ -2.06
TUSC3-205ENST00000507316 ACACBO00763 2458 aa2.19□□□□□ -2.06
TUSC3-205ENST00000507316 BDP1A6H8Y1 2624 aa2.19□□□□□ -2.06
TUSC3-205ENST00000507316 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
TUSC3-205ENST00000507316 POLQO75417 2590 aa2.18□□□□□ -2.06
TUSC3-205ENST00000507316 COL7A1Q02388 2944 aa2.18□□□□□ -2.06
TUSC3-205ENST00000507316 ITPR2Q14571 2701 aa2.18□□□□□ -2.06
TUSC3-205ENST00000507316 ATRQ13535 2644 aa2.17□□□□□ -2.06
TUSC3-205ENST00000507316 TRRAPQ9Y4A5 3859 aa2.17□□□□□ -2.06
TUSC3-205ENST00000507316 SVEP1Q4LDE5 3571 aa2.16□□□□□ -2.06
TUSC3-205ENST00000507316 FRAS1Q86XX4 4008 aa2.16□□□□□ -2.06
TUSC3-205ENST00000507316 EYSQ5T1H1 3165 aa2.16□□□□□ -2.06
TUSC3-205ENST00000507316 ZNF292O60281 2723 aa2.15□□□□□ -2.06
TUSC3-205ENST00000507316 USP24Q9UPU5 2620 aa2.15□□□□□ -2.06
TUSC3-205ENST00000507316 STAB2Q8WWQ8 2551 aa2.15□□□□□ -2.07
TUSC3-205ENST00000507316 MYO18BQ8IUG5 2567 aa2.14□□□□□ -2.07
TUSC3-205ENST00000507316 ANK3Q12955 4377 aaKnown RBP2.14□□□□□ -2.07
TUSC3-205ENST00000507316 VPS13CQ709C8 3753 aa2.13□□□□□ -2.07
TUSC3-205ENST00000507316 ANK2Q01484 3957 aa2.13□□□□□ -2.07
TUSC3-205ENST00000507316 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
TUSC3-205ENST00000507316 MUC3AQ02505 3323 aa2.12□□□□□ -2.07
TUSC3-205ENST00000507316 FBN2P35556 2912 aa2.12□□□□□ -2.07
TUSC3-205ENST00000507316 CSMD3Q7Z407 3707 aa2.12□□□□□ -2.07
TUSC3-205ENST00000507316 CSMD2Q7Z408 3487 aa2.11□□□□□ -2.07
TUSC3-205ENST00000507316 KRTAP10-10P60014 251 aa2.1□□□□□ -2.07
TUSC3-205ENST00000507316 LYSTQ99698 3801 aa2.1□□□□□ -2.07
TUSC3-205ENST00000507316 NOTCH1P46531 2555 aa2.1□□□□□ -2.07
TUSC3-205ENST00000507316 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
TUSC3-205ENST00000507316 PKD1L1Q8TDX9 2849 aa2.1□□□□□ -2.07
TUSC3-205ENST00000507316 DNAH8Q96JB1 4490 aa2.1□□□□□ -2.07
TUSC3-205ENST00000507316 ZANQ9Y493 2812 aa2.09□□□□□ -2.08
TUSC3-205ENST00000507316 TEP1Q99973 2627 aaKnown RBP2.08□□□□□ -2.08
TUSC3-205ENST00000507316 FBN3Q75N90 2809 aa2.08□□□□□ -2.08
TUSC3-205ENST00000507316 DYNC2H1Q8NCM8 4307 aaKnown RBP2.06□□□□□ -2.08
TUSC3-205ENST00000507316 CMYA5Q8N3K9 4069 aa2.06□□□□□ -2.08
TUSC3-205ENST00000507316 DNAH6Q9C0G6 4158 aa2.06□□□□□ -2.08
TUSC3-205ENST00000507316 FLNAP21333 2647 aaKnown RBP2.05□□□□□ -2.08
TUSC3-205ENST00000507316 DNAH3Q8TD57 4116 aa2.05□□□□□ -2.08
TUSC3-205ENST00000507316 CUBNO60494 3623 aa2.05□□□□□ -2.08
TUSC3-205ENST00000507316 DNAH9Q9NYC9 4486 aa2.03□□□□□ -2.08
TUSC3-205ENST00000507316 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
TUSC3-205ENST00000507316 TENM3Q9P273 2699 aa2.03□□□□□ -2.09
TUSC3-205ENST00000507316 MAST4O15021 2626 aa2.03□□□□□ -2.09
TUSC3-205ENST00000507316 DNAH10Q8IVF4 4471 aa2.02□□□□□ -2.09
TUSC3-205ENST00000507316 HUWE1Q7Z6Z7 4374 aaKnown RBP2.02□□□□□ -2.09
TUSC3-205ENST00000507316 FLNCQ14315 2725 aa2.02□□□□□ -2.09
TUSC3-205ENST00000507316 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
TUSC3-205ENST00000507316 DNAH17Q9UFH2 4485 aa2.02□□□□□ -2.09
TUSC3-205ENST00000507316 MGAM2Q2M2H8 2515 aa2.02□□□□□ -2.09
TUSC3-205ENST00000507316 KRTAP8-1Q8IUC2 63 aa2.01□□□□□ -2.09
TUSC3-205ENST00000507316 STAB1Q9NY15 2570 aa2□□□□□ -2.09
TUSC3-205ENST00000507316 DNAH2Q9P225 4427 aa2□□□□□ -2.09
TUSC3-205ENST00000507316 MYCBP2O75592 4640 aa2□□□□□ -2.09
TUSC3-205ENST00000507316 NSD1Q96L73 2696 aaPredicted RBP1.99□□□□□ -2.09
TUSC3-205ENST00000507316 IGSF10Q6WRI0 2623 aa1.99□□□□□ -2.09
TUSC3-205ENST00000507316 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
TUSC3-205ENST00000507316 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
TUSC3-205ENST00000507316 HECTD4Q9Y4D8 3996 aa1.97□□□□□ -2.09
TUSC3-205ENST00000507316 FLNBO75369 2602 aaKnown RBP1.95□□□□□ -2.1
TUSC3-205ENST00000507316 KMT2AQ03164 3969 aa1.93□□□□□ -2.1
TUSC3-205ENST00000507316 M0R2T5 61 aa1.92□□□□□ -2.1
TUSC3-205ENST00000507316 TENM1Q9UKZ4 2725 aa1.91□□□□□ -2.1
TUSC3-205ENST00000507316 SACSQ9NZJ4 4579 aa1.91□□□□□ -2.1
TUSC3-205ENST00000507316 PKD1P98161 4303 aa1.89□□□□□ -2.11
TUSC3-205ENST00000507316 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
TUSC3-205ENST00000507316 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
TUSC3-205ENST00000507316 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
TUSC3-205ENST00000507316 FLGP20930 4061 aaPredicted RBP1.88□□□□□ -2.11
TUSC3-205ENST00000507316 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
TUSC3-205ENST00000507316 APOBP04114 4563 aaKnown RBP1.85□□□□□ -2.11
TUSC3-205ENST00000507316 HSPG2P98160 4391 aa1.84□□□□□ -2.11
TUSC3-205ENST00000507316 ZNF469Q96JG9 3925 aaPredicted RBP1.84□□□□□ -2.12
TUSC3-205ENST00000507316 LRP1Q07954 4544 aaKnown RBP1.84□□□□□ -2.12
TUSC3-205ENST00000507316 PKHD1L1Q86WI1 4243 aa1.83□□□□□ -2.12
TUSC3-205ENST00000507316 VPS13BQ7Z7G8 4022 aa1.83□□□□□ -2.12
TUSC3-205ENST00000507316 KRTAP10-4P60372 401 aaPredicted RBP1.83□□□□□ -2.12
TUSC3-205ENST00000507316 PKHD1P08F94 4074 aa1.81□□□□□ -2.12
TUSC3-205ENST00000507316 STARD9Q9P2P6 4700 aa1.8□□□□□ -2.12
TUSC3-205ENST00000507316 DNAH5Q8TE73 4624 aa1.8□□□□□ -2.12
TUSC3-205ENST00000507316 FAT2Q9NYQ8 4349 aa1.8□□□□□ -2.12
TUSC3-205ENST00000507316 J3QKU1 62 aa1.78□□□□□ -2.12
TUSC3-205ENST00000507316 SPRR2GQ9BYE4 73 aa1.78□□□□□ -2.12
TUSC3-205ENST00000507316 TNXBP22105 4242 aa1.78□□□□□ -2.12
TUSC3-205ENST00000507316 SMR3BP02814 79 aaPredicted RBP1.77□□□□□ -2.13
TUSC3-205ENST00000507316 FAT3Q8TDW7 4589 aa1.76□□□□□ -2.13
TUSC3-205ENST00000507316 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms