RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 MT1BP07438 61 aa6.46□□□□□ -1.38
HMGCS1-203ENST00000507004 ATP5EP2Q5VTU8 51 aa6.46□□□□□ -1.38
HMGCS1-203ENST00000507004 ATOX1O00244 68 aa6.43□□□□□ -1.38
HMGCS1-203ENST00000507004 IMUPQ9GZP8 106 aa6.43□□□□□ -1.38
HMGCS1-203ENST00000507004 FAM240AA0A1B0GVK7 77 aa6.42□□□□□ -1.38
HMGCS1-203ENST00000507004 UQCRQO14949 82 aa6.41□□□□□ -1.38
HMGCS1-203ENST00000507004 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
HMGCS1-203ENST00000507004 NDUFC1O43677 76 aa6.38□□□□□ -1.39
HMGCS1-203ENST00000507004 A8MUN3 132 aa6.37□□□□□ -1.39
HMGCS1-203ENST00000507004 H0YAA0 97 aa6.37□□□□□ -1.39
HMGCS1-203ENST00000507004 HIST1H4AP62805 103 aaKnown RBP6.36□□□□□ -1.39
HMGCS1-203ENST00000507004 PCP4L1A6NKN8 68 aa6.34□□□□□ -1.39
HMGCS1-203ENST00000507004 H0Y9P7 68 aa6.34□□□□□ -1.39
HMGCS1-203ENST00000507004 NEBP20929 6669 aa6.31□□□□□ -1.4
HMGCS1-203ENST00000507004 A0A087WVE0 104 aa6.3□□□□□ -1.4
HMGCS1-203ENST00000507004 LINC00643Q86TS7 51 aa6.29□□□□□ -1.4
HMGCS1-203ENST00000507004 MP68P56378 58 aa6.26□□□□□ -1.41
HMGCS1-203ENST00000507004 KRTAP5-9P26371 169 aa6.23□□□□□ -1.41
HMGCS1-203ENST00000507004 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
HMGCS1-203ENST00000507004 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
HMGCS1-203ENST00000507004 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
HMGCS1-203ENST00000507004 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
HMGCS1-203ENST00000507004 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
HMGCS1-203ENST00000507004 C20orf197Q8N268 126 aa6.19□□□□□ -1.42
HMGCS1-203ENST00000507004 H3BPC8 53 aa6.18□□□□□ -1.42
HMGCS1-203ENST00000507004 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
HMGCS1-203ENST00000507004 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
HMGCS1-203ENST00000507004 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
HMGCS1-203ENST00000507004 R4GN34 69 aa6.12□□□□□ -1.43
HMGCS1-203ENST00000507004 J3QR89 54 aa6.1□□□□□ -1.43
HMGCS1-203ENST00000507004 KMT2DO14686 5537 aa6.08□□□□□ -1.44
HMGCS1-203ENST00000507004 DMAC1Q96GE9 116 aa6.07□□□□□ -1.44
HMGCS1-203ENST00000507004 SCGB1A1P11684 91 aa6.06□□□□□ -1.44
HMGCS1-203ENST00000507004 MT1XP80297 61 aa6.04□□□□□ -1.44
HMGCS1-203ENST00000507004 M0QZ58 72 aa6.03□□□□□ -1.44
HMGCS1-203ENST00000507004 P0C880 135 aa6.01□□□□□ -1.45
HMGCS1-203ENST00000507004 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
HMGCS1-203ENST00000507004 MDN1Q9NU22 5596 aa6.01□□□□□ -1.45
HMGCS1-203ENST00000507004 TRAV7A0A075B6U4 112 aa6□□□□□ -1.45
HMGCS1-203ENST00000507004 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
HMGCS1-203ENST00000507004 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
HMGCS1-203ENST00000507004 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
HMGCS1-203ENST00000507004 A0A1B0GV90 55 aa5.97□□□□□ -1.45
HMGCS1-203ENST00000507004 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
HMGCS1-203ENST00000507004 SPTSSBQ8NFR3 76 aa5.96□□□□□ -1.46
HMGCS1-203ENST00000507004 ACYP2P14621 99 aa5.95□□□□□ -1.46
HMGCS1-203ENST00000507004 SPRR2EP22531 72 aa5.94□□□□□ -1.46
HMGCS1-203ENST00000507004 SPRR2BP35325 72 aa5.94□□□□□ -1.46
HMGCS1-203ENST00000507004 SPRR2AP35326 72 aa5.94□□□□□ -1.46
HMGCS1-203ENST00000507004 SMIM20Q8N5G0 67 aa5.92□□□□□ -1.46
HMGCS1-203ENST00000507004 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
HMGCS1-203ENST00000507004 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
HMGCS1-203ENST00000507004 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
HMGCS1-203ENST00000507004 MT-ATP8P03928 68 aa5.86□□□□□ -1.47
HMGCS1-203ENST00000507004 CHKB-CPT1BH3BT56 60 aa5.83□□□□□ -1.48
HMGCS1-203ENST00000507004 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
HMGCS1-203ENST00000507004 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
HMGCS1-203ENST00000507004 KRTAP2-2Q9BYT5 123 aa5.78□□□□□ -1.48
HMGCS1-203ENST00000507004 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
HMGCS1-203ENST00000507004 K7ERU9 68 aa5.77□□□□□ -1.49
HMGCS1-203ENST00000507004 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
HMGCS1-203ENST00000507004 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
HMGCS1-203ENST00000507004 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
HMGCS1-203ENST00000507004 SPRR2DP22532 72 aa5.75□□□□□ -1.49
HMGCS1-203ENST00000507004 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
HMGCS1-203ENST00000507004 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
HMGCS1-203ENST00000507004 SNURFQ9Y675 71 aa5.66□□□□□ -1.5
HMGCS1-203ENST00000507004 CAMK2N1Q7Z7J9 78 aa5.62□□□□□ -1.51
HMGCS1-203ENST00000507004 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
HMGCS1-203ENST00000507004 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
HMGCS1-203ENST00000507004 SEC61GP60059 68 aa5.56□□□□□ -1.52
HMGCS1-203ENST00000507004 KRTAP13-4Q3LI77 160 aa5.54□□□□□ -1.52
HMGCS1-203ENST00000507004 SERP1Q9Y6X1 66 aa5.54□□□□□ -1.52
HMGCS1-203ENST00000507004 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
HMGCS1-203ENST00000507004 COA5Q86WW8 74 aa5.5□□□□□ -1.53
HMGCS1-203ENST00000507004 A0A1B0GU33 70 aa5.41□□□□□ -1.54
HMGCS1-203ENST00000507004 A0A0D9SG42 100 aa5.4□□□□□ -1.54
HMGCS1-203ENST00000507004 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.54
HMGCS1-203ENST00000507004 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.54
HMGCS1-203ENST00000507004 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
HMGCS1-203ENST00000507004 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
HMGCS1-203ENST00000507004 MT1EP04732 61 aa5.38□□□□□ -1.55
HMGCS1-203ENST00000507004 COX7CP15954 63 aa5.38□□□□□ -1.55
HMGCS1-203ENST00000507004 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
HMGCS1-203ENST00000507004 H3BS24 57 aa5.36□□□□□ -1.55
HMGCS1-203ENST00000507004 SPATA8Q6RVD6 105 aa5.35□□□□□ -1.55
HMGCS1-203ENST00000507004 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
HMGCS1-203ENST00000507004 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
HMGCS1-203ENST00000507004 H7BZZ5 65 aa5.3□□□□□ -1.56
HMGCS1-203ENST00000507004 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
HMGCS1-203ENST00000507004 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
HMGCS1-203ENST00000507004 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
HMGCS1-203ENST00000507004 A0A1B0GU69 56 aa5.28□□□□□ -1.56
HMGCS1-203ENST00000507004 MT1GP13640 62 aa5.28□□□□□ -1.56
HMGCS1-203ENST00000507004 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
HMGCS1-203ENST00000507004 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
HMGCS1-203ENST00000507004 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
HMGCS1-203ENST00000507004 TNP1P09430 55 aa5.17□□□□□ -1.58
HMGCS1-203ENST00000507004 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
HMGCS1-203ENST00000507004 PRR15LQ9BU68 103 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms