RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 HERC1Q15751 4861 aa6.54□□□□□ -1.36
ITGA3-208ENST00000506437 TP53AIP1Q9HCN2 124 aa6.54□□□□□ -1.36
ITGA3-208ENST00000506437 ACYP2P14621 99 aa6.53□□□□□ -1.36
ITGA3-208ENST00000506437 C8orf17Q9NRJ1 99 aa6.53□□□□□ -1.36
ITGA3-208ENST00000506437 A8MUU9 505 aa6.53□□□□□ -1.36
ITGA3-208ENST00000506437 Q96NJ1 140 aa6.48□□□□□ -1.37
ITGA3-208ENST00000506437 DMAC1Q96GE9 116 aa6.47□□□□□ -1.37
ITGA3-208ENST00000506437 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.38
ITGA3-208ENST00000506437 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
ITGA3-208ENST00000506437 LPAP08519 4548 aa6.45□□□□□ -1.38
ITGA3-208ENST00000506437 NDUFAF8A1L188 74 aa6.44□□□□□ -1.38
ITGA3-208ENST00000506437 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
ITGA3-208ENST00000506437 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
ITGA3-208ENST00000506437 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
ITGA3-208ENST00000506437 A0A1B0GVX0 72 aa6.41□□□□□ -1.38
ITGA3-208ENST00000506437 SPINK1P00995 79 aa6.39□□□□□ -1.39
ITGA3-208ENST00000506437 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
ITGA3-208ENST00000506437 LRP2P98164 4655 aa6.36□□□□□ -1.39
ITGA3-208ENST00000506437 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
ITGA3-208ENST00000506437 H0YAA0 97 aa6.34□□□□□ -1.39
ITGA3-208ENST00000506437 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.39
ITGA3-208ENST00000506437 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
ITGA3-208ENST00000506437 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
ITGA3-208ENST00000506437 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
ITGA3-208ENST00000506437 LCE2AQ5TA79 106 aaPredicted RBP6.28□□□□□ -1.4
ITGA3-208ENST00000506437 MUC2Q02817 5179 aa6.24□□□□□ -1.41
ITGA3-208ENST00000506437 IGKV2D-30A0A075B6S6 120 aa6.24□□□□□ -1.41
ITGA3-208ENST00000506437 IGKV2-30P06310 120 aa6.24□□□□□ -1.41
ITGA3-208ENST00000506437 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
ITGA3-208ENST00000506437 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
ITGA3-208ENST00000506437 LORP23490 312 aaPredicted RBP6.18□□□□□ -1.42
ITGA3-208ENST00000506437 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
ITGA3-208ENST00000506437 RPS29P62273 56 aaKnown RBP6.17□□□□□ -1.42
ITGA3-208ENST00000506437 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
ITGA3-208ENST00000506437 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
ITGA3-208ENST00000506437 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
ITGA3-208ENST00000506437 A0A1B0GU33 70 aa6.12□□□□□ -1.43
ITGA3-208ENST00000506437 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
ITGA3-208ENST00000506437 XP32Q5T750 250 aa6.07□□□□□ -1.44
ITGA3-208ENST00000506437 H1FX-AS1Q4G0G2 97 aa6.04□□□□□ -1.44
ITGA3-208ENST00000506437 K7ERS5 55 aa6.02□□□□□ -1.45
ITGA3-208ENST00000506437 A0A0D9SG42 100 aa5.96□□□□□ -1.45
ITGA3-208ENST00000506437 FAT4Q6V0I7 4981 aa5.95□□□□□ -1.46
ITGA3-208ENST00000506437 COX6B2Q6YFQ2 88 aa5.95□□□□□ -1.46
ITGA3-208ENST00000506437 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
ITGA3-208ENST00000506437 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.46
ITGA3-208ENST00000506437 MUC17Q685J3 4493 aa5.89□□□□□ -1.47
ITGA3-208ENST00000506437 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
ITGA3-208ENST00000506437 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
ITGA3-208ENST00000506437 SEC61BP60468 96 aaKnown RBP5.8□□□□□ -1.48
ITGA3-208ENST00000506437 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
ITGA3-208ENST00000506437 KRTAP10-6P60371 365 aaPredicted RBP5.68□□□□□ -1.5
ITGA3-208ENST00000506437 S4R3F8 94 aa5.67□□□□□ -1.5
ITGA3-208ENST00000506437 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
ITGA3-208ENST00000506437 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.51
ITGA3-208ENST00000506437 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
ITGA3-208ENST00000506437 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
ITGA3-208ENST00000506437 M0R2T5 61 aa5.49□□□□□ -1.53
ITGA3-208ENST00000506437 MT1HP80294 61 aa5.45□□□□□ -1.54
ITGA3-208ENST00000506437 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
ITGA3-208ENST00000506437 USH2AO75445 5202 aa5.26□□□□□ -1.57
ITGA3-208ENST00000506437 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
ITGA3-208ENST00000506437 MT1FP04733 61 aa5.21□□□□□ -1.58
ITGA3-208ENST00000506437 KRTAP10-10P60014 251 aa5.21□□□□□ -1.58
ITGA3-208ENST00000506437 MT2AP02795 61 aa5.2□□□□□ -1.58
ITGA3-208ENST00000506437 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
ITGA3-208ENST00000506437 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
ITGA3-208ENST00000506437 M0QZ58 72 aa5.12□□□□□ -1.59
ITGA3-208ENST00000506437 R4GN34 69 aa5.09□□□□□ -1.6
ITGA3-208ENST00000506437 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
ITGA3-208ENST00000506437 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
ITGA3-208ENST00000506437 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
ITGA3-208ENST00000506437 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
ITGA3-208ENST00000506437 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
ITGA3-208ENST00000506437 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
ITGA3-208ENST00000506437 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
ITGA3-208ENST00000506437 MT1BP07438 61 aa4.86□□□□□ -1.63
ITGA3-208ENST00000506437 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
ITGA3-208ENST00000506437 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
ITGA3-208ENST00000506437 KMT2DO14686 5537 aa4.81□□□□□ -1.64
ITGA3-208ENST00000506437 INE1O15225 51 aa4.81□□□□□ -1.64
ITGA3-208ENST00000506437 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
ITGA3-208ENST00000506437 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
ITGA3-208ENST00000506437 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
ITGA3-208ENST00000506437 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
ITGA3-208ENST00000506437 TNP1P09430 55 aa4.67□□□□□ -1.66
ITGA3-208ENST00000506437 MT1XP80297 61 aa4.67□□□□□ -1.66
ITGA3-208ENST00000506437 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
ITGA3-208ENST00000506437 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
ITGA3-208ENST00000506437 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
ITGA3-208ENST00000506437 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
ITGA3-208ENST00000506437 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
ITGA3-208ENST00000506437 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
ITGA3-208ENST00000506437 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
ITGA3-208ENST00000506437 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
ITGA3-208ENST00000506437 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
ITGA3-208ENST00000506437 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
ITGA3-208ENST00000506437 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
ITGA3-208ENST00000506437 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
ITGA3-208ENST00000506437 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms