RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 KRTAP2-4Q9BYR9 128 aa9.11□□□□□ -0.95
SQSTM1-210ENST00000506042 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
SQSTM1-210ENST00000506042 H0YAA0 97 aa9.07□□□□□ -0.96
SQSTM1-210ENST00000506042 SMCPP49901 116 aaPredicted RBP9.07□□□□□ -0.96
SQSTM1-210ENST00000506042 A8MUN3 132 aa9.03□□□□□ -0.96
SQSTM1-210ENST00000506042 SPRR2FQ96RM1 72 aa9□□□□□ -0.97
SQSTM1-210ENST00000506042 ACYP1P07311 99 aa8.99□□□□□ -0.97
SQSTM1-210ENST00000506042 PLAC4Q8WY50 150 aa8.99□□□□□ -0.97
SQSTM1-210ENST00000506042 ATOX1O00244 68 aa8.98□□□□□ -0.97
SQSTM1-210ENST00000506042 KMT2DO14686 5537 aa8.97□□□□□ -0.97
SQSTM1-210ENST00000506042 SPRR2EP22531 72 aa8.97□□□□□ -0.97
SQSTM1-210ENST00000506042 SPRR2BP35325 72 aa8.97□□□□□ -0.97
SQSTM1-210ENST00000506042 SPRR2AP35326 72 aa8.97□□□□□ -0.97
SQSTM1-210ENST00000506042 COL5A1-AS1Q5SY13 56 aa8.97□□□□□ -0.97
SQSTM1-210ENST00000506042 K7EP34 96 aa8.95□□□□□ -0.98
SQSTM1-210ENST00000506042 PRO0461Q9UI25 63 aa8.94□□□□□ -0.98
SQSTM1-210ENST00000506042 GTF2H5Q6ZYL4 71 aa8.93□□□□□ -0.98
SQSTM1-210ENST00000506042 A0A087WVE0 104 aa8.92□□□□□ -0.98
SQSTM1-210ENST00000506042 ADM2Q7Z4H4 148 aa8.92□□□□□ -0.98
SQSTM1-210ENST00000506042 MDN1Q9NU22 5596 aa8.9□□□□□ -0.98
SQSTM1-210ENST00000506042 UQCRQO14949 82 aa8.9□□□□□ -0.98
SQSTM1-210ENST00000506042 KRTAP8-1Q8IUC2 63 aa8.89□□□□□ -0.99
SQSTM1-210ENST00000506042 C20orf197Q8N268 126 aa8.89□□□□□ -0.99
SQSTM1-210ENST00000506042 F8W1H4 67 aa8.87□□□□□ -0.99
SQSTM1-210ENST00000506042 H0Y9P7 68 aa8.86□□□□□ -0.99
SQSTM1-210ENST00000506042 R4GN34 69 aa8.84□□□□□ -0.99
SQSTM1-210ENST00000506042 ATP5EP2Q5VTU8 51 aa8.83□□□□□ -1
SQSTM1-210ENST00000506042 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
SQSTM1-210ENST00000506042 ETDBQ3ZM63 59 aa8.79□□□□□ -1
SQSTM1-210ENST00000506042 KRTAP2-2Q9BYT5 123 aa8.79□□□□□ -1
SQSTM1-210ENST00000506042 KRTAP2-1Q9BYU5 128 aa8.79□□□□□ -1
SQSTM1-210ENST00000506042 MT1XP80297 61 aa8.77□□□□□ -1.01
SQSTM1-210ENST00000506042 KRTAP12-2P59991 146 aa8.76□□□□□ -1.01
SQSTM1-210ENST00000506042 SPRR2DP22532 72 aa8.7□□□□□ -1.02
SQSTM1-210ENST00000506042 MP68P56378 58 aa8.7□□□□□ -1.02
SQSTM1-210ENST00000506042 LCE1AQ5T7P2 110 aa8.7□□□□□ -1.02
SQSTM1-210ENST00000506042 M0QZ58 72 aa8.69□□□□□ -1.02
SQSTM1-210ENST00000506042 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
SQSTM1-210ENST00000506042 LOC105371267A0A1B0GV96 52 aa8.67□□□□□ -1.02
SQSTM1-210ENST00000506042 FAM240AA0A1B0GVK7 77 aa8.65□□□□□ -1.02
SQSTM1-210ENST00000506042 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
SQSTM1-210ENST00000506042 P0C880 135 aa8.55□□□□□ -1.04
SQSTM1-210ENST00000506042 H3BPC8 53 aa8.5□□□□□ -1.05
SQSTM1-210ENST00000506042 LINC00643Q86TS7 51 aa8.5□□□□□ -1.05
SQSTM1-210ENST00000506042 KRTAP4-8A0A0G2JLE6 195 aa8.46□□□□□ -1.06
SQSTM1-210ENST00000506042 MT-ATP8P03928 68 aa8.46□□□□□ -1.06
SQSTM1-210ENST00000506042 LCE3BQ5TA77 95 aa8.46□□□□□ -1.06
SQSTM1-210ENST00000506042 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.06
SQSTM1-210ENST00000506042 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
SQSTM1-210ENST00000506042 OCR1Q9BZK8 76 aa8.43□□□□□ -1.06
SQSTM1-210ENST00000506042 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.06
SQSTM1-210ENST00000506042 KRTAP10-12P60413 245 aa8.38□□□□□ -1.07
SQSTM1-210ENST00000506042 TRAV7A0A075B6U4 112 aa8.35□□□□□ -1.07
SQSTM1-210ENST00000506042 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
SQSTM1-210ENST00000506042 PCP4L1A6NKN8 68 aa8.32□□□□□ -1.08
SQSTM1-210ENST00000506042 SCGB1A1P11684 91 aa8.32□□□□□ -1.08
SQSTM1-210ENST00000506042 ACYP2P14621 99 aa8.28□□□□□ -1.08
SQSTM1-210ENST00000506042 CHKB-CPT1BH3BT56 60 aa8.18□□□□□ -1.1
SQSTM1-210ENST00000506042 J3QR89 54 aa8.14□□□□□ -1.11
SQSTM1-210ENST00000506042 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
SQSTM1-210ENST00000506042 SMIM20Q8N5G0 67 aa8.02□□□□□ -1.13
SQSTM1-210ENST00000506042 LCE5AQ5TCM9 118 aa7.93□□□□□ -1.14
SQSTM1-210ENST00000506042 KRTAP19-3Q7Z4W3 81 aa7.9□□□□□ -1.14
SQSTM1-210ENST00000506042 KRTAP4-9Q9BYQ8 210 aa7.86□□□□□ -1.15
SQSTM1-210ENST00000506042 DSTQ03001 7570 aaKnown RBP7.83□□□□□ -1.16
SQSTM1-210ENST00000506042 MT1EP04732 61 aa7.82□□□□□ -1.16
SQSTM1-210ENST00000506042 KRTAP19-7Q3SYF9 63 aa7.82□□□□□ -1.16
SQSTM1-210ENST00000506042 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
SQSTM1-210ENST00000506042 GPR98Q8WXG9 6306 aa7.82□□□□□ -1.16
SQSTM1-210ENST00000506042 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
SQSTM1-210ENST00000506042 SEC61GP60059 68 aa7.79□□□□□ -1.16
SQSTM1-210ENST00000506042 A0A1B0GV90 55 aa7.77□□□□□ -1.17
SQSTM1-210ENST00000506042 SPANXA2-OT1Q8N9U9 137 aa7.77□□□□□ -1.17
SQSTM1-210ENST00000506042 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
SQSTM1-210ENST00000506042 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
SQSTM1-210ENST00000506042 MT1GP13640 62 aa7.72□□□□□ -1.17
SQSTM1-210ENST00000506042 A0A0D9SG42 100 aa7.71□□□□□ -1.18
SQSTM1-210ENST00000506042 SNURFQ9Y675 71 aa7.7□□□□□ -1.18
SQSTM1-210ENST00000506042 LCE4AQ5TA78 99 aa7.69□□□□□ -1.18
SQSTM1-210ENST00000506042 LCE1DQ5T752 114 aa7.68□□□□□ -1.18
SQSTM1-210ENST00000506042 SPINT4Q6UDR6 99 aa7.64□□□□□ -1.19
SQSTM1-210ENST00000506042 MT4P47944 62 aa7.58□□□□□ -1.2
SQSTM1-210ENST00000506042 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
SQSTM1-210ENST00000506042 K7ERU9 68 aa7.55□□□□□ -1.2
SQSTM1-210ENST00000506042 KRTAP9-9Q9BYP9 154 aa7.55□□□□□ -1.2
SQSTM1-210ENST00000506042 KRTAP9-4Q9BYQ2 154 aa7.55□□□□□ -1.2
SQSTM1-210ENST00000506042 A0A1B0GU33 70 aa7.52□□□□□ -1.21
SQSTM1-210ENST00000506042 COA5Q86WW8 74 aa7.52□□□□□ -1.21
SQSTM1-210ENST00000506042 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
SQSTM1-210ENST00000506042 MT1MQ8N339 61 aa7.49□□□□□ -1.21
SQSTM1-210ENST00000506042 SERP2Q8N6R1 65 aa7.47□□□□□ -1.21
SQSTM1-210ENST00000506042 SMIM26A0A096LP01 95 aa7.41□□□□□ -1.22
SQSTM1-210ENST00000506042 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
SQSTM1-210ENST00000506042 MT1LQ93083 61 aa7.41□□□□□ -1.22
SQSTM1-210ENST00000506042 KRTAP4-12Q9BQ66 201 aa7.39□□□□□ -1.23
SQSTM1-210ENST00000506042 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
SQSTM1-210ENST00000506042 TNP1P09430 55 aa7.36□□□□□ -1.23
SQSTM1-210ENST00000506042 KRTAP4-7Q9BYR0 210 aa7.34□□□□□ -1.23
SQSTM1-210ENST00000506042 KRTAP5-4Q6L8H1 288 aa7.33□□□□□ -1.24
SQSTM1-210ENST00000506042 C10orf95Q9H7T3 257 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms