RNA–Protein interactions for RNA: ENST00000505937.2

PCDH1-205, Transcript of protocadherin 1, humanhuman

TSL 5

Gene PCDH1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-205ENST00000505937 H3BPC8 53 aa7.16□□□□□ -1.26
PCDH1-205ENST00000505937 IMUPQ9GZP8 106 aa7.16□□□□□ -1.26
PCDH1-205ENST00000505937 SSPOA2VEC9 5147 aa7.15□□□□□ -1.26
PCDH1-205ENST00000505937 NDUFC1O43677 76 aa7.13□□□□□ -1.27
PCDH1-205ENST00000505937 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
PCDH1-205ENST00000505937 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
PCDH1-205ENST00000505937 MT-ATP8P03928 68 aa7.09□□□□□ -1.27
PCDH1-205ENST00000505937 SMIM20Q8N5G0 67 aa7.06□□□□□ -1.28
PCDH1-205ENST00000505937 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
PCDH1-205ENST00000505937 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
PCDH1-205ENST00000505937 TRAV7A0A075B6U4 112 aa7.01□□□□□ -1.29
PCDH1-205ENST00000505937 CRIPTQ9P021 101 aa6.99□□□□□ -1.29
PCDH1-205ENST00000505937 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
PCDH1-205ENST00000505937 H0YAA0 97 aa6.98□□□□□ -1.29
PCDH1-205ENST00000505937 DMAC1Q96GE9 116 aa6.98□□□□□ -1.29
PCDH1-205ENST00000505937 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
PCDH1-205ENST00000505937 Q5VV11 94 aa6.96□□□□□ -1.3
PCDH1-205ENST00000505937 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
PCDH1-205ENST00000505937 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
PCDH1-205ENST00000505937 KRTAP9-7A8MTY7 169 aa6.87□□□□□ -1.31
PCDH1-205ENST00000505937 MT1BP07438 61 aa6.87□□□□□ -1.31
PCDH1-205ENST00000505937 ACYP2P14621 99 aa6.87□□□□□ -1.31
PCDH1-205ENST00000505937 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
PCDH1-205ENST00000505937 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
PCDH1-205ENST00000505937 A6NN06 94 aa6.82□□□□□ -1.32
PCDH1-205ENST00000505937 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
PCDH1-205ENST00000505937 SPTSSBQ8NFR3 76 aa6.81□□□□□ -1.32
PCDH1-205ENST00000505937 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
PCDH1-205ENST00000505937 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
PCDH1-205ENST00000505937 R4GN34 69 aa6.76□□□□□ -1.33
PCDH1-205ENST00000505937 SPANXA2-OT1Q8N9U9 137 aa6.75□□□□□ -1.33
PCDH1-205ENST00000505937 P0C880 135 aa6.73□□□□□ -1.33
PCDH1-205ENST00000505937 KRTAP10-5P60370 271 aa6.71□□□□□ -1.34
PCDH1-205ENST00000505937 M0QZ58 72 aa6.7□□□□□ -1.34
PCDH1-205ENST00000505937 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
PCDH1-205ENST00000505937 SYNE2Q8WXH0 6885 aaKnown RBP6.65□□□□□ -1.34
PCDH1-205ENST00000505937 COX7CP15954 63 aa6.64□□□□□ -1.35
PCDH1-205ENST00000505937 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
PCDH1-205ENST00000505937 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
PCDH1-205ENST00000505937 KRTAP6-3Q3LI67 103 aa6.59□□□□□ -1.35
PCDH1-205ENST00000505937 COA5Q86WW8 74 aa6.54□□□□□ -1.36
PCDH1-205ENST00000505937 ANAPC13Q9BS18 74 aa6.5□□□□□ -1.37
PCDH1-205ENST00000505937 H7BZZ5 65 aa6.49□□□□□ -1.37
PCDH1-205ENST00000505937 MT1XP80297 61 aa6.48□□□□□ -1.37
PCDH1-205ENST00000505937 SEC61GP60059 68 aa6.46□□□□□ -1.38
PCDH1-205ENST00000505937 CYSTM1Q9H1C7 97 aa6.43□□□□□ -1.38
PCDH1-205ENST00000505937 SERP1Q9Y6X1 66 aa6.42□□□□□ -1.38
PCDH1-205ENST00000505937 H3BS24 57 aa6.38□□□□□ -1.39
PCDH1-205ENST00000505937 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
PCDH1-205ENST00000505937 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
PCDH1-205ENST00000505937 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
PCDH1-205ENST00000505937 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
PCDH1-205ENST00000505937 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
PCDH1-205ENST00000505937 A0A1B0GU33 70 aa6.27□□□□□ -1.41
PCDH1-205ENST00000505937 NEBP20929 6669 aa6.27□□□□□ -1.41
PCDH1-205ENST00000505937 MUC12Q9UKN1 5478 aa6.27□□□□□ -1.41
PCDH1-205ENST00000505937 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
PCDH1-205ENST00000505937 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
PCDH1-205ENST00000505937 A0A1B0GU69 56 aa6.24□□□□□ -1.41
PCDH1-205ENST00000505937 KMT2DO14686 5537 aa6.24□□□□□ -1.41
PCDH1-205ENST00000505937 A0A0D9SG42 100 aa6.22□□□□□ -1.41
PCDH1-205ENST00000505937 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
PCDH1-205ENST00000505937 SPATA8Q6RVD6 105 aa6.2□□□□□ -1.42
PCDH1-205ENST00000505937 KRTAP10-7P60409 375 aaPredicted RBP6.19□□□□□ -1.42
PCDH1-205ENST00000505937 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
PCDH1-205ENST00000505937 MDN1Q9NU22 5596 aa6.15□□□□□ -1.42
PCDH1-205ENST00000505937 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
PCDH1-205ENST00000505937 TMEM258P61165 79 aa6.14□□□□□ -1.43
PCDH1-205ENST00000505937 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
PCDH1-205ENST00000505937 PRR15LQ9BU68 103 aa6.14□□□□□ -1.43
PCDH1-205ENST00000505937 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
PCDH1-205ENST00000505937 SMIM26A0A096LP01 95 aa6.13□□□□□ -1.43
PCDH1-205ENST00000505937 SPRR2EP22531 72 aa6.09□□□□□ -1.43
PCDH1-205ENST00000505937 SPRR2BP35325 72 aa6.09□□□□□ -1.43
PCDH1-205ENST00000505937 SPRR2AP35326 72 aa6.09□□□□□ -1.43
PCDH1-205ENST00000505937 KRTAP20-1Q3LI63 56 aa6.06□□□□□ -1.44
PCDH1-205ENST00000505937 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
PCDH1-205ENST00000505937 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
PCDH1-205ENST00000505937 A8MU10 97 aa5.99□□□□□ -1.45
PCDH1-205ENST00000505937 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
PCDH1-205ENST00000505937 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
PCDH1-205ENST00000505937 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
PCDH1-205ENST00000505937 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
PCDH1-205ENST00000505937 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
PCDH1-205ENST00000505937 UQCR11O14957 56 aa5.9□□□□□ -1.46
PCDH1-205ENST00000505937 SPRR2DP22532 72 aa5.89□□□□□ -1.47
PCDH1-205ENST00000505937 V9GYY9 64 aa5.83□□□□□ -1.48
PCDH1-205ENST00000505937 TNP1P09430 55 aa5.8□□□□□ -1.48
PCDH1-205ENST00000505937 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
PCDH1-205ENST00000505937 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
PCDH1-205ENST00000505937 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
PCDH1-205ENST00000505937 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
PCDH1-205ENST00000505937 C10orf95Q9H7T3 257 aa5.76□□□□□ -1.49
PCDH1-205ENST00000505937 MT1EP04732 61 aa5.75□□□□□ -1.49
PCDH1-205ENST00000505937 Q1T7F1 81 aa5.73□□□□□ -1.49
PCDH1-205ENST00000505937 PSPHP1O15172 72 aa5.72□□□□□ -1.49
PCDH1-205ENST00000505937 K7ERS5 55 aa5.71□□□□□ -1.5
PCDH1-205ENST00000505937 LCE3BQ5TA77 95 aa5.71□□□□□ -1.5
PCDH1-205ENST00000505937 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
PCDH1-205ENST00000505937 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms